RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 FBXO11Q86XK2 927 aa13.15□□□□□ -0.3
CHMP1B-201ENST00000526991 CCDC65Q8IXS2 484 aa13.15□□□□□ -0.3
CHMP1B-201ENST00000526991 PIGOQ8TEQ8 1089 aa13.15□□□□□ -0.3
CHMP1B-201ENST00000526991 CCDC17Q96LX7 622 aa13.15□□□□□ -0.3
CHMP1B-201ENST00000526991 PURBQ96QR8 312 aaKnown RBP13.15□□□□□ -0.3
CHMP1B-201ENST00000526991 PSMD1Q99460 953 aa13.15□□□□□ -0.3
CHMP1B-201ENST00000526991 TLR10Q9BXR5 811 aa13.15□□□□□ -0.3
CHMP1B-201ENST00000526991 TSGA10Q9BZW7 698 aa13.15□□□□□ -0.3
CHMP1B-201ENST00000526991 MYH7BA7E2Y1 1941 aa13.15□□□□□ -0.3
CHMP1B-201ENST00000526991 MEIS2O14770 477 aa13.15□□□□□ -0.3
CHMP1B-201ENST00000526991 SORBS3O60504 671 aa13.15□□□□□ -0.3
CHMP1B-201ENST00000526991 ACTN2P35609 894 aa13.15□□□□□ -0.3
CHMP1B-201ENST00000526991 SLC9C1Q4G0N8 1177 aa13.15□□□□□ -0.3
CHMP1B-201ENST00000526991 PPP4R3AQ6IN85 833 aa13.15□□□□□ -0.3
CHMP1B-201ENST00000526991 CATSPER3Q86XQ3 398 aa13.15□□□□□ -0.3
CHMP1B-201ENST00000526991 FAM71BQ8TC56 605 aa13.15□□□□□ -0.3
CHMP1B-201ENST00000526991 PRR12Q9ULL5 1215 aa13.15□□□□□ -0.3
CHMP1B-201ENST00000526991 FAM86B1E9PN63 330 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 FAM86B2P0C5J1 330 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 MYBP10242 640 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 SMARCA1P28370 1054 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 PPP1R2P41236 205 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 GUCY2FP51841 1108 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 KLHL30Q0D2K2 578 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 MAP9Q49MG5 647 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 FIGNQ5HY92 759 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 SYDE2Q5VT97 1194 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 SFR1Q86XK3 245 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 NOX5Q96PH1 765 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 ACBD3Q9H3P7 528 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 YY1AP1Q9H869 796 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 BRCA2P51587 3418 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 WNT10BO00744 389 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 POLD1P28340 1107 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 NOP2P46087 812 aaKnown RBP13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 NOVP48745 357 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 CLK2P49760 499 aaKnown RBP13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 ARHGAP4P98171 946 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 KCNH2Q12809 1159 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 PLS1Q14651 629 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 KLHDC7AQ5VTJ3 777 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 KCTD16Q68DU8 428 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 MAEAQ7L5Y9 396 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 KLHL7Q8IXQ5 586 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 ZNF513Q8N8E2 541 aaPredicted RBP13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 HYOU1Q9Y4L1 999 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 PCDHB13Q9Y5F0 798 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 ANO9A1A5B4 782 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 GOLGA6BA6NDN3 693 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 SPDYE3A6NKU9 549 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 PAFAH1B1P43034 410 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 CASP4P49662 377 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 CCDC70Q6NSX1 233 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 TATDN1Q6P1N9 297 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 BHMT2Q9H2M3 363 aa13.14□□□□□ -0.31
CHMP1B-201ENST00000526991 DNAH12Q6ZR08 3092 aa13.13□□□□□ -0.31
CHMP1B-201ENST00000526991 AGPSO00116 658 aa13.13□□□□□ -0.31
CHMP1B-201ENST00000526991 ZCWPW2Q504Y3 356 aa13.13□□□□□ -0.31
CHMP1B-201ENST00000526991 AFAP1L1Q8TED9 768 aa13.13□□□□□ -0.31
CHMP1B-201ENST00000526991 SGSM3Q96HU1 749 aa13.13□□□□□ -0.31
CHMP1B-201ENST00000526991 REEP2Q9BRK0 252 aa13.13□□□□□ -0.31
CHMP1B-201ENST00000526991 AMNQ9BXJ7 453 aa13.13□□□□□ -0.31
CHMP1B-201ENST00000526991 TMCO5BA8MYB1 307 aa13.13□□□□□ -0.31
CHMP1B-201ENST00000526991 TUBB4BP68371 445 aa13.13□□□□□ -0.31
CHMP1B-201ENST00000526991 CTTNQ14247 550 aaKnown RBP13.13□□□□□ -0.31
CHMP1B-201ENST00000526991 C8orf74Q6P047 294 aa13.13□□□□□ -0.31
CHMP1B-201ENST00000526991 TSEN2Q8NCE0 465 aaKnown RBP13.13□□□□□ -0.31
CHMP1B-201ENST00000526991 SPAG5Q96R06 1193 aa13.13□□□□□ -0.31
CHMP1B-201ENST00000526991 NYAP2Q9P242 653 aa13.13□□□□□ -0.31
CHMP1B-201ENST00000526991 ZBTB21Q9ULJ3 1066 aa13.13□□□□□ -0.31
CHMP1B-201ENST00000526991 HNRNPH3P31942 346 aaKnown RBP13.12□□□□□ -0.31
CHMP1B-201ENST00000526991 CDK17Q00537 523 aa13.12□□□□□ -0.31
CHMP1B-201ENST00000526991 GUCY2DQ02846 1103 aa13.12□□□□□ -0.31
CHMP1B-201ENST00000526991 RASA3Q14644 834 aa13.12□□□□□ -0.31
CHMP1B-201ENST00000526991 AGBL1Q96MI9 1066 aa13.12□□□□□ -0.31
CHMP1B-201ENST00000526991 KRT12Q99456 494 aa13.12□□□□□ -0.31
CHMP1B-201ENST00000526991 ZNF341Q9BYN7 854 aa13.12□□□□□ -0.31
CHMP1B-201ENST00000526991 HDAC9Q9UKV0 1011 aa13.12□□□□□ -0.31
CHMP1B-201ENST00000526991 NFU1Q9UMS0 254 aa13.12□□□□□ -0.31
CHMP1B-201ENST00000526991 PLIN4Q96Q06 1357 aa13.12□□□□□ -0.31
CHMP1B-201ENST00000526991 RBAK-RBAKDNI3L0D1 243 aa13.12□□□□□ -0.31
CHMP1B-201ENST00000526991 OPLAHO14841 1288 aa13.12□□□□□ -0.31
CHMP1B-201ENST00000526991 CETN3O15182 167 aa13.12□□□□□ -0.31
CHMP1B-201ENST00000526991 PEX10O60683 326 aa13.12□□□□□ -0.31
CHMP1B-201ENST00000526991 GCNT3O95395 438 aa13.12□□□□□ -0.31
CHMP1B-201ENST00000526991 GLI1P08151 1106 aa13.12□□□□□ -0.31
CHMP1B-201ENST00000526991 CARSP49589 748 aaKnown RBP13.12□□□□□ -0.31
CHMP1B-201ENST00000526991 PSMD2Q13200 908 aa13.12□□□□□ -0.31
CHMP1B-201ENST00000526991 HAUS3Q68CZ6 603 aa13.12□□□□□ -0.31
CHMP1B-201ENST00000526991 PRPF38AQ8NAV1 312 aaKnown RBP13.12□□□□□ -0.31
CHMP1B-201ENST00000526991 GOLGA5Q8TBA6 731 aa13.12□□□□□ -0.31
CHMP1B-201ENST00000526991 JDP2Q8WYK2 163 aa13.12□□□□□ -0.31
CHMP1B-201ENST00000526991 FAM153BP0C7A2 387 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 STAT2P52630 851 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 PTK2Q05397 1052 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 ASIC2Q16515 512 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 ASTE1Q2TB18 679 aaPredicted RBP13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 FAM153CQ494X1 144 aa13.11□□□□□ -0.31
CHMP1B-201ENST00000526991 IQCEQ6IPM2 695 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms