RNA–Protein interactions for RNA: ENST00000526977.5

VPS28-207, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,036 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-207ENST00000526977 PCDHA10Q9Y5I2 948 aa20.97■□□□□ 0.95
VPS28-207ENST00000526977 ZNF236Q9UL36 1845 aa20.96■□□□□ 0.95
VPS28-207ENST00000526977 SYNGAP1Q96PV0 1343 aa20.96■□□□□ 0.95
VPS28-207ENST00000526977 POTEFA5A3E0 1075 aa20.96■□□□□ 0.95
VPS28-207ENST00000526977 CCNE2O96020 404 aa20.96■□□□□ 0.95
VPS28-207ENST00000526977 PMS1P54277 932 aaKnown RBP20.96■□□□□ 0.95
VPS28-207ENST00000526977 STIM1Q13586 685 aa20.96■□□□□ 0.95
VPS28-207ENST00000526977 CTTNQ14247 550 aaKnown RBP20.96■□□□□ 0.95
VPS28-207ENST00000526977 POTEGQ6S5H5 508 aa20.96■□□□□ 0.95
VPS28-207ENST00000526977 USP6NLQ92738 828 aa20.96■□□□□ 0.95
VPS28-207ENST00000526977 DHTKD1Q96HY7 919 aaPredicted RBP20.96■□□□□ 0.95
VPS28-207ENST00000526977 TINF2Q9BSI4 451 aa20.96■□□□□ 0.95
VPS28-207ENST00000526977 GTPBP4Q9BZE4 634 aaKnown RBP20.96■□□□□ 0.95
VPS28-207ENST00000526977 DDX41Q9UJV9 622 aaKnown RBP20.96■□□□□ 0.95
VPS28-207ENST00000526977 PVALEFA0A1B0GWK0 134 aa20.95■□□□□ 0.94
VPS28-207ENST00000526977 FCGRTP55899 365 aa20.95■□□□□ 0.94
VPS28-207ENST00000526977 CNNM4Q6P4Q7 775 aa20.95■□□□□ 0.94
VPS28-207ENST00000526977 NPLOC4Q8TAT6 608 aa20.95■□□□□ 0.94
VPS28-207ENST00000526977 SCFD2Q8WU76 684 aa20.95■□□□□ 0.94
VPS28-207ENST00000526977 NACC1Q96RE7 527 aa20.95■□□□□ 0.94
VPS28-207ENST00000526977 ZSWIM4Q9H7M6 989 aa20.95■□□□□ 0.94
VPS28-207ENST00000526977 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.95■□□□□ 0.94
VPS28-207ENST00000526977 GJD2Q9UKL4 321 aa20.95■□□□□ 0.94
VPS28-207ENST00000526977 TRIM49BA6NDI0 452 aa20.95■□□□□ 0.94
VPS28-207ENST00000526977 E9PMD0 336 aa20.95■□□□□ 0.94
VPS28-207ENST00000526977 PSMA7O14818 248 aa20.95■□□□□ 0.94
VPS28-207ENST00000526977 UBA1P22314 1058 aaKnown RBP20.95■□□□□ 0.94
VPS28-207ENST00000526977 RGS2P41220 211 aa20.95■□□□□ 0.94
VPS28-207ENST00000526977 QARSP47897 775 aaKnown RBP20.95■□□□□ 0.94
VPS28-207ENST00000526977 TERF1P54274 439 aa20.95■□□□□ 0.94
VPS28-207ENST00000526977 TTLL4Q14679 1199 aa20.95■□□□□ 0.94
VPS28-207ENST00000526977 CYFIP1Q7L576 1253 aa20.95■□□□□ 0.94
VPS28-207ENST00000526977 IRF2BP1Q8IU81 584 aa20.95■□□□□ 0.94
VPS28-207ENST00000526977 FBXO16Q8IX29 292 aaPredicted RBP20.95■□□□□ 0.94
VPS28-207ENST00000526977 LXNQ9BS40 222 aa20.95■□□□□ 0.94
VPS28-207ENST00000526977 TMX1Q9H3N1 280 aa20.95■□□□□ 0.94
VPS28-207ENST00000526977 BMP2KQ9NSY1 1161 aaPredicted RBP20.95■□□□□ 0.94
VPS28-207ENST00000526977 KIAA1217Q5T5P2 1943 aa20.95■□□□□ 0.94
VPS28-207ENST00000526977 PLA2G4BP0C869 781 aa20.94■□□□□ 0.94
VPS28-207ENST00000526977 LACTBP83111 547 aaPredicted RBP20.94■□□□□ 0.94
VPS28-207ENST00000526977 KRT31Q15323 416 aa20.94■□□□□ 0.94
VPS28-207ENST00000526977 TCP11X2Q5H9J9 407 aa20.94■□□□□ 0.94
VPS28-207ENST00000526977 UNC13DQ70J99 1090 aa20.94■□□□□ 0.94
VPS28-207ENST00000526977 DYMQ7RTS9 669 aa20.94■□□□□ 0.94
VPS28-207ENST00000526977 ABHD16BQ9H3Z7 469 aa20.94■□□□□ 0.94
VPS28-207ENST00000526977 PLXNA1Q9UIW2 1896 aa20.94■□□□□ 0.94
VPS28-207ENST00000526977 DKC1O60832 514 aaKnown RBP eCLIP20.94■□□□□ 0.94
VPS28-207ENST00000526977 TBC1D8O95759 1140 aa20.94■□□□□ 0.94
VPS28-207ENST00000526977 SNAI1O95863 264 aaPredicted RBP20.94■□□□□ 0.94
VPS28-207ENST00000526977 PSAPP07602 524 aa20.94■□□□□ 0.94
VPS28-207ENST00000526977 PBX1P40424 430 aa20.94■□□□□ 0.94
VPS28-207ENST00000526977 SPAG1Q07617 926 aa20.94■□□□□ 0.94
VPS28-207ENST00000526977 GOLGA8FQ08AF8 430 aa20.94■□□□□ 0.94
VPS28-207ENST00000526977 GOLGA8DPQ0D2H9 430 aa20.94■□□□□ 0.94
VPS28-207ENST00000526977 FILIP1LQ4L180 1135 aa20.94■□□□□ 0.94
VPS28-207ENST00000526977 COBLL1Q53SF7 1204 aa20.94■□□□□ 0.94
VPS28-207ENST00000526977 TTI2Q6NXR4 508 aa20.94■□□□□ 0.94
VPS28-207ENST00000526977 CCDC62Q6P9F0 684 aa20.94■□□□□ 0.94
VPS28-207ENST00000526977 METTL7BQ6UX53 244 aa20.94■□□□□ 0.94
VPS28-207ENST00000526977 DDX12PQ92771 950 aa20.94■□□□□ 0.94
VPS28-207ENST00000526977 HPS3Q969F9 1004 aa20.94■□□□□ 0.94
VPS28-207ENST00000526977 BCAS3Q9H6U6 928 aa20.94■□□□□ 0.94
VPS28-207ENST00000526977 KCND1Q9NSA2 647 aa20.94■□□□□ 0.94
VPS28-207ENST00000526977 RNF186Q9NXI6 227 aa20.94■□□□□ 0.94
VPS28-207ENST00000526977 RBM47A0AV96 593 aaKnown RBP20.93■□□□□ 0.94
VPS28-207ENST00000526977 KCNJ18B7U540 433 aa20.93■□□□□ 0.94
VPS28-207ENST00000526977 ECM2O94769 699 aaPredicted RBP20.93■□□□□ 0.94
VPS28-207ENST00000526977 FARP2O94887 1054 aaPredicted RBP20.93■□□□□ 0.94
VPS28-207ENST00000526977 LYPLA2O95372 231 aa20.93■□□□□ 0.94
VPS28-207ENST00000526977 EYA4O95677 639 aa20.93■□□□□ 0.94
VPS28-207ENST00000526977 PSMC4P43686 418 aa20.93■□□□□ 0.94
VPS28-207ENST00000526977 ACTR2P61160 394 aa20.93■□□□□ 0.94
VPS28-207ENST00000526977 PSMC5P62195 406 aa20.93■□□□□ 0.94
VPS28-207ENST00000526977 PSMC6P62333 389 aa20.93■□□□□ 0.94
VPS28-207ENST00000526977 SP3Q02447 781 aa20.93■□□□□ 0.94
VPS28-207ENST00000526977 IRF5Q13568 498 aa20.93■□□□□ 0.94
VPS28-207ENST00000526977 KCNJ12Q14500 433 aa20.93■□□□□ 0.94
VPS28-207ENST00000526977 LY6KQ17RY6 165 aa20.93■□□□□ 0.94
VPS28-207ENST00000526977 MIS18BP1Q6P0N0 1132 aa20.93■□□□□ 0.94
VPS28-207ENST00000526977 SYT2Q8N9I0 419 aaPredicted RBP20.93■□□□□ 0.94
VPS28-207ENST00000526977 BANK1Q8NDB2 785 aa20.93■□□□□ 0.94
VPS28-207ENST00000526977 MLXIPQ9HAP2 919 aa20.93■□□□□ 0.94
VPS28-207ENST00000526977 LRRC37A2A6NM11 1700 aa20.93■□□□□ 0.94
VPS28-207ENST00000526977 USP27XA6NNY8 438 aa20.92■□□□□ 0.94
VPS28-207ENST00000526977 TRPA1O75762 1119 aa20.92■□□□□ 0.94
VPS28-207ENST00000526977 ATG7O95352 703 aa20.92■□□□□ 0.94
VPS28-207ENST00000526977 TXNP10599 105 aaKnown RBP20.92■□□□□ 0.94
VPS28-207ENST00000526977 KIF22Q14807 665 aa20.92■□□□□ 0.94
VPS28-207ENST00000526977 TAPT1Q6NXT6 567 aa20.92■□□□□ 0.94
VPS28-207ENST00000526977 ABHD15Q6UXT9 468 aa20.92■□□□□ 0.94
VPS28-207ENST00000526977 C4orf19Q8IY42 314 aa20.92■□□□□ 0.94
VPS28-207ENST00000526977 KIAA0895Q8NCT3 520 aa20.92■□□□□ 0.94
VPS28-207ENST00000526977 DUSP9Q99956 384 aaKnown RBP20.92■□□□□ 0.94
VPS28-207ENST00000526977 GGPS1O95749 300 aa20.92■□□□□ 0.94
VPS28-207ENST00000526977 CCNE1P24864 410 aa20.92■□□□□ 0.94
VPS28-207ENST00000526977 PPP1R2P41236 205 aa20.92■□□□□ 0.94
VPS28-207ENST00000526977 SLC12A3P55017 1021 aa20.92■□□□□ 0.94
VPS28-207ENST00000526977 HTRA3P83110 453 aa20.92■□□□□ 0.94
VPS28-207ENST00000526977 CELF3Q5SZQ8 465 aaKnown RBP20.92■□□□□ 0.94
VPS28-207ENST00000526977 OLFML2BQ68BL8 750 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms