RNA–Protein interactions for RNA: ENST00000526913.5

KNL1-203, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,584 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-203ENST00000526913 SEZ6L2Q6UXD5 910 aa1.72□□□□□ -2.13
KNL1-203ENST00000526913 ARHGAP36Q6ZRI8 547 aa1.72□□□□□ -2.13
KNL1-203ENST00000526913 USP45Q70EL2 814 aa1.72□□□□□ -2.13
KNL1-203ENST00000526913 CXorf67Q86X51 503 aaPredicted RBP1.72□□□□□ -2.13
KNL1-203ENST00000526913 PHF6Q8IWS0 365 aaKnown RBP eCLIP1.72□□□□□ -2.13
KNL1-203ENST00000526913 KIAA0319LQ8IZA0 1049 aa1.72□□□□□ -2.13
KNL1-203ENST00000526913 FAM43AQ8N2R8 423 aa1.72□□□□□ -2.13
KNL1-203ENST00000526913 C2orf69Q8N8R5 385 aa1.72□□□□□ -2.13
KNL1-203ENST00000526913 FAM181AQ8N9Y4 354 aa1.72□□□□□ -2.13
KNL1-203ENST00000526913 ERCC4Q92889 916 aaPredicted RBP1.72□□□□□ -2.13
KNL1-203ENST00000526913 SCARF2Q96GP6 870 aaPredicted RBP1.72□□□□□ -2.13
KNL1-203ENST00000526913 FDXACB1Q9BRP7 624 aaPredicted RBP1.72□□□□□ -2.13
KNL1-203ENST00000526913 DSCC1Q9BVC3 393 aa1.72□□□□□ -2.13
KNL1-203ENST00000526913 GBP3Q9H0R5 595 aa1.72□□□□□ -2.13
KNL1-203ENST00000526913 GSX1Q9H4S2 264 aaPredicted RBP1.72□□□□□ -2.13
KNL1-203ENST00000526913 GPR27Q9NS67 375 aa1.72□□□□□ -2.13
KNL1-203ENST00000526913 CATSPERZQ9NTU4 200 aa1.72□□□□□ -2.13
KNL1-203ENST00000526913 MRPS18AQ9NVS2 196 aaKnown RBP1.72□□□□□ -2.13
KNL1-203ENST00000526913 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.72□□□□□ -2.13
KNL1-203ENST00000526913 RASA4BC9J798 803 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 RASA4O43374 803 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 GFPT2O94808 682 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 ZBED1O96006 694 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 KITP10721 976 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 MAPK4P31152 587 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 DSC2Q02487 901 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 NFIAQ12857 509 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 PAK1Q13153 545 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 LAPTM5Q13571 262 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 SEPT2Q15019 361 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 MAPRE1Q15691 268 aaKnown RBP1.71□□□□□ -2.14
KNL1-203ENST00000526913 DDX53Q86TM3 631 aaKnown RBP1.71□□□□□ -2.14
KNL1-203ENST00000526913 CPOQ8IVL8 374 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 SH2D3CQ8N5H7 860 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 GPATCH11Q8N954 259 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 C12orf50Q8NA57 414 aaPredicted RBP1.71□□□□□ -2.14
KNL1-203ENST00000526913 ATG16L2Q8NAA4 619 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 SKA1Q96BD8 255 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 FOXRED1Q96CU9 486 aaPredicted RBP1.71□□□□□ -2.14
KNL1-203ENST00000526913 LIN37Q96GY3 246 aaPredicted RBP1.71□□□□□ -2.14
KNL1-203ENST00000526913 MYD88Q99836 296 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 DUSP23Q9BVJ7 150 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 RNF38Q9H0F5 515 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 SEMA6BQ9H3T3 888 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 CERS4Q9HA82 394 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 ZNF277Q9NRM2 450 aaPredicted RBP1.71□□□□□ -2.14
KNL1-203ENST00000526913 BLOC1S4Q9NUP1 217 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 TRMT13Q9NUP7 481 aaKnown RBP1.71□□□□□ -2.14
KNL1-203ENST00000526913 MRGBPQ9NV56 204 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 EVLQ9UI08 416 aaPredicted RBP1.71□□□□□ -2.14
KNL1-203ENST00000526913 CRYL1Q9Y2S2 319 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 SPO11Q9Y5K1 396 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 BACE2Q9Y5Z0 518 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 SCINQ9Y6U3 715 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 CCDC154A6NI56 674 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 OFD1O75665 1012 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 HARSP12081 509 aaKnown RBP1.71□□□□□ -2.14
KNL1-203ENST00000526913 HNRNPLP14866 589 aaKnown RBP eCLIP1.71□□□□□ -2.14
KNL1-203ENST00000526913 PHKG2P15735 406 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 RAB1AP62820 205 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 PPP3CAQ08209 521 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 NMIQ13287 307 aaPredicted RBP1.71□□□□□ -2.14
KNL1-203ENST00000526913 MLECQ14165 292 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 RRAGBQ5VZM2 374 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 PDXDC1Q6P996 788 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 NPAS3Q8IXF0 933 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 TOP6BLQ8N6T0 577 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 USHBP1Q8N6Y0 703 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 GALNT6Q8NCL4 622 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 IL17REQ8NFR9 667 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 CLEC4DQ8WXI8 215 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 ERP27Q96DN0 273 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 MVB12AQ96EY5 273 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 C16orf92Q96LL3 132 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 DUSP15Q9H1R2 295 aaPredicted RBP1.71□□□□□ -2.14
KNL1-203ENST00000526913 BCAS3Q9H6U6 928 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 GDF2Q9UK05 429 aaPredicted RBP1.71□□□□□ -2.14
KNL1-203ENST00000526913 ZKSCAN5Q9Y2L8 839 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 RWDD3Q9Y3V2 267 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 TMEM233B4DJY2 109 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 ACOT7O00154 380 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 NRG2O14511 850 aaPredicted RBP1.71□□□□□ -2.14
KNL1-203ENST00000526913 WNT9AO14904 365 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 NCAM2O15394 837 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 GLI1P08151 1106 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 GSTM1P09488 218 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 ZNF865P0CJ78 1059 aaPredicted RBP1.71□□□□□ -2.14
KNL1-203ENST00000526913 GYS1P13807 737 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 VAV1P15498 845 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 ENPP1P22413 925 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 AGFG1P52594 562 aaKnown RBP1.71□□□□□ -2.14
KNL1-203ENST00000526913 NR1H2P55055 460 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 LGALS4P56470 323 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 G3BP1Q13283 466 aaKnown RBP eCLIP1.71□□□□□ -2.14
KNL1-203ENST00000526913 ZRSR2Q15696 482 aaKnown RBP1.71□□□□□ -2.14
KNL1-203ENST00000526913 TIGD6Q17RP2 521 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 C3orf38Q5JPI3 329 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 AGAP9Q5VTM2 703 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 JAKMIP3Q5VZ66 844 aa1.71□□□□□ -2.14
KNL1-203ENST00000526913 RASSF3Q86WH2 238 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms