RNA–Protein interactions for RNA: ENST00000526874.5

CTR9-203, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene CTR9, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-203ENST00000526874 CLIC5Q9NZA1 410 aa5.94□□□□□ -1.46
CTR9-203ENST00000526874 KLHL14Q9P2G3 628 aa5.94□□□□□ -1.46
CTR9-203ENST00000526874 HDAC9Q9UKV0 1011 aa5.94□□□□□ -1.46
CTR9-203ENST00000526874 F8W031 263 aaPredicted RBP5.93□□□□□ -1.46
CTR9-203ENST00000526874 hCG_1984214I3L0E3 225 aa5.93□□□□□ -1.46
CTR9-203ENST00000526874 MPOP05164 745 aa5.93□□□□□ -1.46
CTR9-203ENST00000526874 GLI4P10075 376 aa5.93□□□□□ -1.46
CTR9-203ENST00000526874 VIPR1P32241 457 aa5.93□□□□□ -1.46
CTR9-203ENST00000526874 RENBPP51606 427 aa5.93□□□□□ -1.46
CTR9-203ENST00000526874 TERF1P54274 439 aa5.93□□□□□ -1.46
CTR9-203ENST00000526874 SUMO1P63165 101 aaKnown RBP5.93□□□□□ -1.46
CTR9-203ENST00000526874 SRSF3P84103 164 aaKnown RBP5.93□□□□□ -1.46
CTR9-203ENST00000526874 ZNF460Q14592 562 aa5.93□□□□□ -1.46
CTR9-203ENST00000526874 PLEKHN1Q494U1 663 aaPredicted RBP5.93□□□□□ -1.46
CTR9-203ENST00000526874 MINDY4Q4G0A6 757 aa5.93□□□□□ -1.46
CTR9-203ENST00000526874 C1QTNF12Q5T7M4 302 aa5.93□□□□□ -1.46
CTR9-203ENST00000526874 IQCEQ6IPM2 695 aa5.93□□□□□ -1.46
CTR9-203ENST00000526874 CC2D1AQ6P1N0 951 aaPredicted RBP5.93□□□□□ -1.46
CTR9-203ENST00000526874 TMC6Q7Z403 805 aa5.93□□□□□ -1.46
CTR9-203ENST00000526874 CREBRFQ8IUR6 639 aa5.93□□□□□ -1.46
CTR9-203ENST00000526874 SCUBE1Q8IWY4 988 aa5.93□□□□□ -1.46
CTR9-203ENST00000526874 CBARPQ8N350 705 aaPredicted RBP5.93□□□□□ -1.46
CTR9-203ENST00000526874 TTC30BQ8N4P2 665 aa5.93□□□□□ -1.46
CTR9-203ENST00000526874 SKA1Q96BD8 255 aa5.93□□□□□ -1.46
CTR9-203ENST00000526874 TMEM169Q96HH4 297 aa5.93□□□□□ -1.46
CTR9-203ENST00000526874 FAM53CQ9NYF3 392 aa5.93□□□□□ -1.46
CTR9-203ENST00000526874 POLG2Q9UHN1 485 aa5.93□□□□□ -1.46
CTR9-203ENST00000526874 DBR1Q9UK59 544 aaKnown RBP5.93□□□□□ -1.46
CTR9-203ENST00000526874 PCDHGB3Q9Y5G1 929 aa5.93□□□□□ -1.46
CTR9-203ENST00000526874 NPFFR2Q9Y5X5 522 aa5.93□□□□□ -1.46
CTR9-203ENST00000526874 BRINP1O60477 761 aa5.92□□□□□ -1.46
CTR9-203ENST00000526874 KPNA6O60684 536 aa5.92□□□□□ -1.46
CTR9-203ENST00000526874 RHOBTB3O94955 611 aa5.92□□□□□ -1.46
CTR9-203ENST00000526874 AGR2O95994 175 aa5.92□□□□□ -1.46
CTR9-203ENST00000526874 CT47B1P0C2W7 299 aaPredicted RBP5.92□□□□□ -1.46
CTR9-203ENST00000526874 PF4V1P10720 104 aa5.92□□□□□ -1.46
CTR9-203ENST00000526874 PHKG2P15735 406 aa5.92□□□□□ -1.46
CTR9-203ENST00000526874 NCKAP1LP55160 1127 aa5.92□□□□□ -1.46
CTR9-203ENST00000526874 MESP2Q0VG99 397 aa5.92□□□□□ -1.46
CTR9-203ENST00000526874 ZKSCAN2Q63HK3 967 aa5.92□□□□□ -1.46
CTR9-203ENST00000526874 TMEM132EQ6IEE7 984 aa5.92□□□□□ -1.46
CTR9-203ENST00000526874 MMS22LQ6ZRQ5 1243 aa5.92□□□□□ -1.46
CTR9-203ENST00000526874 SYDE1Q6ZW31 735 aaPredicted RBP5.92□□□□□ -1.46
CTR9-203ENST00000526874 GET4Q7L5D6 327 aaPredicted RBP5.92□□□□□ -1.46
CTR9-203ENST00000526874 CABP7Q86V35 215 aa5.92□□□□□ -1.46
CTR9-203ENST00000526874 NLGN2Q8NFZ4 835 aa5.92□□□□□ -1.46
CTR9-203ENST00000526874 DCAF4Q8WV16 495 aa5.92□□□□□ -1.46
CTR9-203ENST00000526874 CLIP3Q96DZ5 547 aa5.92□□□□□ -1.46
CTR9-203ENST00000526874 JAM3Q9BX67 310 aa5.92□□□□□ -1.46
CTR9-203ENST00000526874 MRPL4Q9BYD3 311 aaKnown RBP5.92□□□□□ -1.46
CTR9-203ENST00000526874 SLC12A5Q9H2X9 1139 aa5.92□□□□□ -1.46
CTR9-203ENST00000526874 ZNF552Q9H707 407 aaPredicted RBP5.92□□□□□ -1.46
CTR9-203ENST00000526874 TRIM39Q9HCM9 518 aa5.92□□□□□ -1.46
CTR9-203ENST00000526874 GPR27Q9NS67 375 aa5.92□□□□□ -1.46
CTR9-203ENST00000526874 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.92□□□□□ -1.46
CTR9-203ENST00000526874 NDOR1Q9UHB4 597 aa5.92□□□□□ -1.46
CTR9-203ENST00000526874 SPEF1Q9Y4P9 236 aa5.92□□□□□ -1.46
CTR9-203ENST00000526874 CTDP1Q9Y5B0 961 aaPredicted RBP5.92□□□□□ -1.46
CTR9-203ENST00000526874 DGKBQ9Y6T7 804 aa5.92□□□□□ -1.46
CTR9-203ENST00000526874 FRMPD2Q68DX3 1309 aaPredicted RBP5.92□□□□□ -1.46
CTR9-203ENST00000526874 POU3F2P20265 443 aaPredicted RBP5.91□□□□□ -1.46
CTR9-203ENST00000526874 LPOP22079 712 aaPredicted RBP5.91□□□□□ -1.46
CTR9-203ENST00000526874 NEK4P51957 841 aa5.91□□□□□ -1.46
CTR9-203ENST00000526874 GTF2A2P52657 109 aa5.91□□□□□ -1.46
CTR9-203ENST00000526874 ZNF200P98182 395 aaPredicted RBP5.91□□□□□ -1.46
CTR9-203ENST00000526874 LSAMPQ13449 338 aa5.91□□□□□ -1.46
CTR9-203ENST00000526874 PUM3Q15397 648 aaKnown RBP5.91□□□□□ -1.46
CTR9-203ENST00000526874 TESK1Q15569 626 aa5.91□□□□□ -1.46
CTR9-203ENST00000526874 ZNF124Q15973 351 aa5.91□□□□□ -1.46
CTR9-203ENST00000526874 TUBB8Q3ZCM7 444 aa5.91□□□□□ -1.46
CTR9-203ENST00000526874 HYIQ5T013 277 aa5.91□□□□□ -1.46
CTR9-203ENST00000526874 STYK1Q6J9G0 422 aa5.91□□□□□ -1.46
CTR9-203ENST00000526874 FBXO15Q8NCQ5 510 aaPredicted RBP5.91□□□□□ -1.46
CTR9-203ENST00000526874 LRGUKQ96M69 825 aa5.91□□□□□ -1.46
CTR9-203ENST00000526874 KCNJ15Q99712 375 aa5.91□□□□□ -1.46
CTR9-203ENST00000526874 LRRC27Q9C0I9 530 aa5.91□□□□□ -1.46
CTR9-203ENST00000526874 RSPH9Q9H1X1 276 aaPredicted RBP5.91□□□□□ -1.46
CTR9-203ENST00000526874 SLC52A2Q9HAB3 445 aa5.91□□□□□ -1.46
CTR9-203ENST00000526874 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.91□□□□□ -1.46
CTR9-203ENST00000526874 DDX21Q9NR30 783 aaKnown RBP eCLIP5.91□□□□□ -1.46
CTR9-203ENST00000526874 KLHL11Q9NVR0 708 aa5.91□□□□□ -1.46
CTR9-203ENST00000526874 FNIP2Q9P278 1114 aa5.91□□□□□ -1.46
CTR9-203ENST00000526874 EVLQ9UI08 416 aaPredicted RBP5.91□□□□□ -1.46
CTR9-203ENST00000526874 KCNG1Q9UIX4 513 aa5.91□□□□□ -1.46
CTR9-203ENST00000526874 ASAP1Q9ULH1 1129 aa5.91□□□□□ -1.46
CTR9-203ENST00000526874 DMTF1Q9Y222 760 aa5.91□□□□□ -1.46
CTR9-203ENST00000526874 PCDHA8Q9Y5H6 950 aa5.91□□□□□ -1.46
CTR9-203ENST00000526874 TNPO3Q9Y5L0 923 aaKnown RBP5.91□□□□□ -1.46
CTR9-203ENST00000526874 ABHD14A-ACY1A0A1B0GW23 586 aa5.9□□□□□ -1.46
CTR9-203ENST00000526874 FZD9O00144 591 aa5.9□□□□□ -1.46
CTR9-203ENST00000526874 SRGAP3O43295 1099 aa5.9□□□□□ -1.46
CTR9-203ENST00000526874 HIP1RO75146 1068 aa5.9□□□□□ -1.46
CTR9-203ENST00000526874 PRKD3O94806 890 aa5.9□□□□□ -1.46
CTR9-203ENST00000526874 FARP2O94887 1054 aaPredicted RBP5.9□□□□□ -1.46
CTR9-203ENST00000526874 CYBBP04839 570 aa5.9□□□□□ -1.46
CTR9-203ENST00000526874 ASGR2P07307 311 aa5.9□□□□□ -1.46
CTR9-203ENST00000526874 VDRP11473 427 aa5.9□□□□□ -1.46
CTR9-203ENST00000526874 TNFAIP3P21580 790 aa5.9□□□□□ -1.46
CTR9-203ENST00000526874 IARSP41252 1262 aaKnown RBP5.9□□□□□ -1.46
CTR9-203ENST00000526874 EPHB3P54753 998 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms