RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 IGSF9BQ9UPX0 1349 aa22.75■■□□□ 1.23
SMCO4-203ENST00000526869 WDR81Q562E7 1941 aa22.74■■□□□ 1.23
SMCO4-203ENST00000526869 COBLO75128 1261 aa22.74■■□□□ 1.23
SMCO4-203ENST00000526869 FARP2O94887 1054 aaPredicted RBP22.74■■□□□ 1.23
SMCO4-203ENST00000526869 SERPINC1P01008 464 aa22.74■■□□□ 1.23
SMCO4-203ENST00000526869 TPM3P06753 285 aa22.74■■□□□ 1.23
SMCO4-203ENST00000526869 CDK11BP21127 795 aaKnown RBP22.74■■□□□ 1.23
SMCO4-203ENST00000526869 LRRC63Q05C16 580 aa22.74■■□□□ 1.23
SMCO4-203ENST00000526869 PADI6Q6TGC4 694 aa22.74■■□□□ 1.23
SMCO4-203ENST00000526869 METTL7BQ6UX53 244 aa22.74■■□□□ 1.23
SMCO4-203ENST00000526869 MAMDC4Q6UXC1 1216 aa22.74■■□□□ 1.23
SMCO4-203ENST00000526869 OTUD6AQ7L8S5 288 aa22.74■■□□□ 1.23
SMCO4-203ENST00000526869 XPO4Q9C0E2 1151 aaKnown RBP22.74■■□□□ 1.23
SMCO4-203ENST00000526869 VTA1Q9NP79 307 aa22.74■■□□□ 1.23
SMCO4-203ENST00000526869 ABT1Q9ULW3 272 aaKnown RBP22.74■■□□□ 1.23
SMCO4-203ENST00000526869 SYNGAP1Q96PV0 1343 aa22.74■■□□□ 1.23
SMCO4-203ENST00000526869 DOCK5Q9H7D0 1870 aa22.73■■□□□ 1.23
SMCO4-203ENST00000526869 IGKV6D-21A0A0A0MT36 114 aa22.73■■□□□ 1.23
SMCO4-203ENST00000526869 ZBTB39O15060 712 aa22.73■■□□□ 1.23
SMCO4-203ENST00000526869 FAM13AO94988 1023 aa22.73■■□□□ 1.23
SMCO4-203ENST00000526869 PTMAP06454 111 aaKnown RBP22.73■■□□□ 1.23
SMCO4-203ENST00000526869 TM4SF4P48230 202 aa22.73■■□□□ 1.23
SMCO4-203ENST00000526869 CCDC62Q6P9F0 684 aa22.73■■□□□ 1.23
SMCO4-203ENST00000526869 ARMCX2Q7L311 632 aa22.73■■□□□ 1.23
SMCO4-203ENST00000526869 CYFIP1Q7L576 1253 aa22.73■■□□□ 1.23
SMCO4-203ENST00000526869 TRIM47Q96LD4 638 aa22.73■■□□□ 1.23
SMCO4-203ENST00000526869 CCDC43Q96MW1 224 aaKnown RBP22.73■■□□□ 1.23
SMCO4-203ENST00000526869 CTAGE1Q96RT6 745 aa22.73■■□□□ 1.23
SMCO4-203ENST00000526869 SLC5A4Q9NY91 659 aa22.73■■□□□ 1.23
SMCO4-203ENST00000526869 GABBR1Q9UBS5 961 aa22.73■■□□□ 1.23
SMCO4-203ENST00000526869 DDX41Q9UJV9 622 aaKnown RBP22.73■■□□□ 1.23
SMCO4-203ENST00000526869 TLR2O60603 784 aa22.72■■□□□ 1.23
SMCO4-203ENST00000526869 PMS1P54277 932 aaKnown RBP22.72■■□□□ 1.23
SMCO4-203ENST00000526869 UBASH3AP57075 661 aa22.72■■□□□ 1.23
SMCO4-203ENST00000526869 CACNB1Q02641 598 aaPredicted RBP22.72■■□□□ 1.23
SMCO4-203ENST00000526869 RAD51AP2Q09MP3 1159 aa22.72■■□□□ 1.23
SMCO4-203ENST00000526869 C17orf99Q6UX52 265 aa22.72■■□□□ 1.23
SMCO4-203ENST00000526869 EPM2AIP1Q7L775 607 aaPredicted RBP22.72■■□□□ 1.23
SMCO4-203ENST00000526869 SFR1Q86XK3 245 aa22.72■■□□□ 1.23
SMCO4-203ENST00000526869 MSL3Q8N5Y2 521 aaKnown RBP22.72■■□□□ 1.23
SMCO4-203ENST00000526869 ANKRD20A12PQ8NF67 263 aa22.72■■□□□ 1.23
SMCO4-203ENST00000526869 SCFD2Q8WU76 684 aa22.72■■□□□ 1.23
SMCO4-203ENST00000526869 DUSP9Q99956 384 aaKnown RBP22.72■■□□□ 1.23
SMCO4-203ENST00000526869 BCAS3Q9H6U6 928 aa22.72■■□□□ 1.23
SMCO4-203ENST00000526869 PARVGQ9HBI0 331 aa22.72■■□□□ 1.23
SMCO4-203ENST00000526869 ZFYVE28Q9HCC9 887 aa22.72■■□□□ 1.23
SMCO4-203ENST00000526869 LIMA1Q9UHB6 759 aaKnown RBP22.72■■□□□ 1.23
SMCO4-203ENST00000526869 CPA4Q9UI42 421 aa22.72■■□□□ 1.23
SMCO4-203ENST00000526869 RBM47A0AV96 593 aaKnown RBP22.71■■□□□ 1.23
SMCO4-203ENST00000526869 STBD1O95210 358 aa22.71■■□□□ 1.23
SMCO4-203ENST00000526869 GGPS1O95749 300 aa22.71■■□□□ 1.23
SMCO4-203ENST00000526869 EEF1GP26641 437 aaKnown RBP22.71■■□□□ 1.23
SMCO4-203ENST00000526869 BMT2Q1RMZ1 405 aa22.71■■□□□ 1.23
SMCO4-203ENST00000526869 SWSAP1Q6NVH7 229 aa22.71■■□□□ 1.23
SMCO4-203ENST00000526869 CCDC60Q8IWA6 550 aaPredicted RBP22.71■■□□□ 1.23
SMCO4-203ENST00000526869 FAM114A1Q8IWE2 563 aa22.71■■□□□ 1.23
SMCO4-203ENST00000526869 TSG101Q99816 390 aa22.71■■□□□ 1.23
SMCO4-203ENST00000526869 SEMA6BQ9H3T3 888 aa22.71■■□□□ 1.23
SMCO4-203ENST00000526869 ZHX3Q9H4I2 956 aa22.71■■□□□ 1.23
SMCO4-203ENST00000526869 MAFBQ9Y5Q3 323 aaPredicted RBP22.71■■□□□ 1.23
SMCO4-203ENST00000526869 UBE4BO95155 1302 aa22.71■■□□□ 1.23
SMCO4-203ENST00000526869 ARID2Q68CP9 1835 aa22.71■■□□□ 1.23
SMCO4-203ENST00000526869 TRIM49BA6NDI0 452 aa22.7■■□□□ 1.22
SMCO4-203ENST00000526869 RSPH10B2B2RC85 870 aa22.7■■□□□ 1.22
SMCO4-203ENST00000526869 EIF3DO15371 548 aaKnown RBP eCLIP22.7■■□□□ 1.22
SMCO4-203ENST00000526869 ZNF862O60290 1169 aa22.7■■□□□ 1.22
SMCO4-203ENST00000526869 FGFR1OPO95684 399 aaKnown RBP22.7■■□□□ 1.22
SMCO4-203ENST00000526869 RSPH10BP0C881 870 aa22.7■■□□□ 1.22
SMCO4-203ENST00000526869 MAPK7Q13164 816 aa22.7■■□□□ 1.22
SMCO4-203ENST00000526869 IRF5Q13568 498 aa22.7■■□□□ 1.22
SMCO4-203ENST00000526869 TTLL4Q14679 1199 aa22.7■■□□□ 1.22
SMCO4-203ENST00000526869 ZCWPW2Q504Y3 356 aa22.7■■□□□ 1.22
SMCO4-203ENST00000526869 XKR3Q5GH77 459 aa22.7■■□□□ 1.22
SMCO4-203ENST00000526869 CELF3Q5SZQ8 465 aaKnown RBP22.7■■□□□ 1.22
SMCO4-203ENST00000526869 ANKRD40Q6AI12 368 aa22.7■■□□□ 1.22
SMCO4-203ENST00000526869 PPP4R3CPQ6ZMV5 832 aa22.7■■□□□ 1.22
SMCO4-203ENST00000526869 APTXQ7Z2E3 356 aaKnown RBP22.7■■□□□ 1.22
SMCO4-203ENST00000526869 DPP9Q86TI2 863 aa22.7■■□□□ 1.22
SMCO4-203ENST00000526869 DRC7Q8IY82 874 aa22.7■■□□□ 1.22
SMCO4-203ENST00000526869 CSGALNACT2Q8N6G5 542 aa22.7■■□□□ 1.22
SMCO4-203ENST00000526869 AFAP1L1Q8TED9 768 aa22.7■■□□□ 1.22
SMCO4-203ENST00000526869 A0A1B0GTH6 734 aa22.69■■□□□ 1.22
SMCO4-203ENST00000526869 GSTTP1A0A1W2PQM5 241 aa22.69■■□□□ 1.22
SMCO4-203ENST00000526869 LRRC10BA6NIK2 292 aa22.69■■□□□ 1.22
SMCO4-203ENST00000526869 BACH1O14867 736 aa22.69■■□□□ 1.22
SMCO4-203ENST00000526869 ARIH2O95376 493 aa22.69■■□□□ 1.22
SMCO4-203ENST00000526869 MAPTP10636 758 aaKnown RBP22.69■■□□□ 1.22
SMCO4-203ENST00000526869 PRKCEQ02156 737 aa22.69■■□□□ 1.22
SMCO4-203ENST00000526869 XKR9Q5GH70 373 aa22.69■■□□□ 1.22
SMCO4-203ENST00000526869 TCP11X2Q5H9J9 407 aa22.69■■□□□ 1.22
SMCO4-203ENST00000526869 MORN1Q5T089 497 aa22.69■■□□□ 1.22
SMCO4-203ENST00000526869 FAM160B1Q5W0V3 765 aa22.69■■□□□ 1.22
SMCO4-203ENST00000526869 STXBP4Q6ZWJ1 553 aa22.69■■□□□ 1.22
SMCO4-203ENST00000526869 ANO5Q75V66 913 aa22.69■■□□□ 1.22
SMCO4-203ENST00000526869 EEPD1Q7L9B9 569 aa22.69■■□□□ 1.22
SMCO4-203ENST00000526869 IRF2BP1Q8IU81 584 aa22.69■■□□□ 1.22
SMCO4-203ENST00000526869 FBXO16Q8IX29 292 aaPredicted RBP22.69■■□□□ 1.22
SMCO4-203ENST00000526869 SCFD1Q8WVM8 642 aa22.69■■□□□ 1.22
SMCO4-203ENST00000526869 SEPT1Q8WYJ6 367 aa22.69■■□□□ 1.22
SMCO4-203ENST00000526869 MAML3Q96JK9 1138 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms