RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 GALNT17Q6IS24 598 aa15.21■□□□□ 0.03
USH1C-203ENST00000526181 MTHFD1LQ6UB35 978 aa15.21■□□□□ 0.03
USH1C-203ENST00000526181 SMAP1Q8IYB5 467 aaPredicted RBP15.21■□□□□ 0.03
USH1C-203ENST00000526181 FAM177A1Q8N128 213 aaPredicted RBP15.21■□□□□ 0.03
USH1C-203ENST00000526181 USP38Q8NB14 1042 aa15.21■□□□□ 0.03
USH1C-203ENST00000526181 NSUN7Q8NE18 718 aaKnown RBP15.21■□□□□ 0.03
USH1C-203ENST00000526181 TET1Q8NFU7 2136 aa15.21■□□□□ 0.03
USH1C-203ENST00000526181 ATP8B4Q8TF62 1192 aa15.21■□□□□ 0.03
USH1C-203ENST00000526181 SLC5A5Q92911 643 aa15.21■□□□□ 0.03
USH1C-203ENST00000526181 GAS2L1Q99501 681 aaPredicted RBP15.21■□□□□ 0.03
USH1C-203ENST00000526181 ZBED2Q9BTP6 218 aa15.21■□□□□ 0.03
USH1C-203ENST00000526181 IFIH1Q9BYX4 1025 aaKnown RBP15.21■□□□□ 0.03
USH1C-203ENST00000526181 C22orf23Q9BZE7 217 aa15.21■□□□□ 0.03
USH1C-203ENST00000526181 GABBR1Q9UBS5 961 aa15.21■□□□□ 0.03
USH1C-203ENST00000526181 SAMM50Q9Y512 469 aa15.21■□□□□ 0.03
USH1C-203ENST00000526181 PCDHA2Q9Y5H9 948 aa15.21■□□□□ 0.03
USH1C-203ENST00000526181 CDY2AQ9Y6F7 541 aa15.21■□□□□ 0.03
USH1C-203ENST00000526181 IGSF9BQ9UPX0 1349 aa15.2■□□□□ 0.02
USH1C-203ENST00000526181 COL6A3P12111 3177 aa15.2■□□□□ 0.02
USH1C-203ENST00000526181 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.2■□□□□ 0.02
USH1C-203ENST00000526181 FAM205CA6NFA0 338 aa15.2■□□□□ 0.02
USH1C-203ENST00000526181 ZBTB42B2RXF5 422 aa15.2■□□□□ 0.02
USH1C-203ENST00000526181 KIF28PB7ZC32 967 aa15.2■□□□□ 0.02
USH1C-203ENST00000526181 SLC37A4O43826 429 aa15.2■□□□□ 0.02
USH1C-203ENST00000526181 EFCAB14O75071 495 aa15.2■□□□□ 0.02
USH1C-203ENST00000526181 GJB5O95377 273 aa15.2■□□□□ 0.02
USH1C-203ENST00000526181 PSAPP07602 524 aa15.2■□□□□ 0.02
USH1C-203ENST00000526181 IGFBP4P22692 258 aa15.2■□□□□ 0.02
USH1C-203ENST00000526181 KLRC1P26715 233 aa15.2■□□□□ 0.02
USH1C-203ENST00000526181 FOSBP53539 338 aa15.2■□□□□ 0.02
USH1C-203ENST00000526181 MRPS6P82932 125 aaKnown RBP15.2■□□□□ 0.02
USH1C-203ENST00000526181 UGCGQ16739 394 aa15.2■□□□□ 0.02
USH1C-203ENST00000526181 Q4G0T1 1027 aa15.2■□□□□ 0.02
USH1C-203ENST00000526181 EARS2Q5JPH6 523 aaKnown RBP15.2■□□□□ 0.02
USH1C-203ENST00000526181 LRCH2Q5VUJ6 765 aa15.2■□□□□ 0.02
USH1C-203ENST00000526181 KRT25Q7Z3Z0 450 aa15.2■□□□□ 0.02
USH1C-203ENST00000526181 RSPH3Q86UC2 560 aa15.2■□□□□ 0.02
USH1C-203ENST00000526181 CKAP2LQ8IYA6 745 aa15.2■□□□□ 0.02
USH1C-203ENST00000526181 MYOCDQ8IZQ8 938 aa15.2■□□□□ 0.02
USH1C-203ENST00000526181 RIT2Q99578 217 aa15.2■□□□□ 0.02
USH1C-203ENST00000526181 KIF2CQ99661 725 aa15.2■□□□□ 0.02
USH1C-203ENST00000526181 UNC45AQ9H3U1 944 aa15.2■□□□□ 0.02
USH1C-203ENST00000526181 TCEAL9Q9UHQ7 104 aa15.2■□□□□ 0.02
USH1C-203ENST00000526181 PCDHA10Q9Y5I2 948 aa15.2■□□□□ 0.02
USH1C-203ENST00000526181 MAFBQ9Y5Q3 323 aaPredicted RBP15.2■□□□□ 0.02
USH1C-203ENST00000526181 CYP3A7-CYP3A51PA0A087WV96 503 aa15.19■□□□□ 0.02
USH1C-203ENST00000526181 HBP1O60381 514 aa15.19■□□□□ 0.02
USH1C-203ENST00000526181 GAS7O60861 476 aa15.19■□□□□ 0.02
USH1C-203ENST00000526181 PSMD10O75832 226 aa15.19■□□□□ 0.02
USH1C-203ENST00000526181 AMHP03971 560 aa15.19■□□□□ 0.02
USH1C-203ENST00000526181 XBP1P17861 261 aa15.19■□□□□ 0.02
USH1C-203ENST00000526181 CYP3A7P24462 503 aa15.19■□□□□ 0.02
USH1C-203ENST00000526181 LETM2Q2VYF4 491 aa15.19■□□□□ 0.02
USH1C-203ENST00000526181 FBXO47Q5MNV8 452 aa15.19■□□□□ 0.02
USH1C-203ENST00000526181 PIK3AP1Q6ZUJ8 805 aa15.19■□□□□ 0.02
USH1C-203ENST00000526181 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.19■□□□□ 0.02
USH1C-203ENST00000526181 ETNPPLQ8TBG4 499 aa15.19■□□□□ 0.02
USH1C-203ENST00000526181 PPM1EQ8WY54 764 aa15.19■□□□□ 0.02
USH1C-203ENST00000526181 ARNTL2Q8WYA1 636 aa15.19■□□□□ 0.02
USH1C-203ENST00000526181 TNPO1Q92973 898 aaKnown RBP15.19■□□□□ 0.02
USH1C-203ENST00000526181 MBOAT7Q96N66 472 aa15.19■□□□□ 0.02
USH1C-203ENST00000526181 TEKT3Q9BXF9 490 aa15.19■□□□□ 0.02
USH1C-203ENST00000526181 DDX25Q9UHL0 483 aaKnown RBP15.19■□□□□ 0.02
USH1C-203ENST00000526181 CHD9Q3L8U1 2897 aa15.18■□□□□ 0.02
USH1C-203ENST00000526181 CCDC194A0A1B0GVG4 234 aa15.18■□□□□ 0.02
USH1C-203ENST00000526181 SMIM35A0A1B0GVV1 85 aa15.18■□□□□ 0.02
USH1C-203ENST00000526181 WDR64B1ANS9 1081 aa15.18■□□□□ 0.02
USH1C-203ENST00000526181 ZNF862O60290 1169 aa15.18■□□□□ 0.02
USH1C-203ENST00000526181 C22orf31O95567 290 aa15.18■□□□□ 0.02
USH1C-203ENST00000526181 NR5A1Q13285 461 aa15.18■□□□□ 0.02
USH1C-203ENST00000526181 BBXQ8WY36 941 aaPredicted RBP15.18■□□□□ 0.02
USH1C-203ENST00000526181 WASF1Q92558 559 aa15.18■□□□□ 0.02
USH1C-203ENST00000526181 APBB2Q92870 758 aa15.18■□□□□ 0.02
USH1C-203ENST00000526181 RAD9AQ99638 391 aa15.18■□□□□ 0.02
USH1C-203ENST00000526181 AGO3Q9H9G7 860 aaKnown RBP15.18■□□□□ 0.02
USH1C-203ENST00000526181 DISC1Q9NRI5 854 aa15.18■□□□□ 0.02
USH1C-203ENST00000526181 TRPV2Q9Y5S1 764 aa15.18■□□□□ 0.02
USH1C-203ENST00000526181 COL1A2P08123 1366 aa15.18■□□□□ 0.02
USH1C-203ENST00000526181 LINC01553A4QN01 128 aa15.17■□□□□ 0.02
USH1C-203ENST00000526181 UPP2O95045 317 aa15.17■□□□□ 0.02
USH1C-203ENST00000526181 CD52P31358 61 aa15.17■□□□□ 0.02
USH1C-203ENST00000526181 CCDC85BQ15834 202 aaPredicted RBP15.17■□□□□ 0.02
USH1C-203ENST00000526181 ZNF484Q5JVG2 852 aa15.17■□□□□ 0.02
USH1C-203ENST00000526181 IER5Q5VY09 327 aa15.17■□□□□ 0.02
USH1C-203ENST00000526181 MOXD1Q6UVY6 613 aa15.17■□□□□ 0.02
USH1C-203ENST00000526181 B3GNT9Q6UX72 402 aa15.17■□□□□ 0.02
USH1C-203ENST00000526181 TSHZ1Q6ZSZ6 1077 aa15.17■□□□□ 0.02
USH1C-203ENST00000526181 NEK8Q86SG6 692 aa15.17■□□□□ 0.02
USH1C-203ENST00000526181 KIAA0319LQ8IZA0 1049 aa15.17■□□□□ 0.02
USH1C-203ENST00000526181 TNFRSF25Q93038 417 aa15.17■□□□□ 0.02
USH1C-203ENST00000526181 PPP1R16BQ96T49 567 aa15.17■□□□□ 0.02
USH1C-203ENST00000526181 CELF4Q9BZC1 486 aaKnown RBP15.17■□□□□ 0.02
USH1C-203ENST00000526181 PRDM6Q9NQX0 595 aa15.17■□□□□ 0.02
USH1C-203ENST00000526181 MTUS1Q9ULD2 1270 aa15.17■□□□□ 0.02
USH1C-203ENST00000526181 COL4A4P53420 1690 aaPredicted RBP15.16■□□□□ 0.02
USH1C-203ENST00000526181 M0QZ92 97 aa15.16■□□□□ 0.02
USH1C-203ENST00000526181 OATP04181 439 aa15.16■□□□□ 0.02
USH1C-203ENST00000526181 SFNP31947 248 aa15.16■□□□□ 0.02
USH1C-203ENST00000526181 KRT2P35908 639 aa15.16■□□□□ 0.02
USH1C-203ENST00000526181 JAK3P52333 1124 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms