RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 CELF4Q9BZC1 486 aaKnown RBP7.53□□□□□ -1.2
CD44-221ENST00000526000 TMX1Q9H3N1 280 aa7.53□□□□□ -1.2
CD44-221ENST00000526000 AZI2Q9H6S1 392 aa7.53□□□□□ -1.2
CD44-221ENST00000526000 JADE2Q9NQC1 790 aa7.53□□□□□ -1.2
CD44-221ENST00000526000 PPP4R2Q9NY27 417 aa7.53□□□□□ -1.2
CD44-221ENST00000526000 SLC9A2Q9UBY0 812 aa7.53□□□□□ -1.2
CD44-221ENST00000526000 NOC2LQ9Y3T9 749 aaKnown RBP7.53□□□□□ -1.2
CD44-221ENST00000526000 USP15Q9Y4E8 981 aaPredicted RBP7.53□□□□□ -1.2
CD44-221ENST00000526000 PCDHB7Q9Y5E2 793 aa7.53□□□□□ -1.2
CD44-221ENST00000526000 TRPV2Q9Y5S1 764 aa7.53□□□□□ -1.2
CD44-221ENST00000526000 COL4A4P53420 1690 aaPredicted RBP7.53□□□□□ -1.2
CD44-221ENST00000526000 REV3LO60673 3130 aa7.53□□□□□ -1.2
CD44-221ENST00000526000 TANC1Q9C0D5 1861 aa7.53□□□□□ -1.2
CD44-221ENST00000526000 FRMPD4Q14CM0 1322 aa7.52□□□□□ -1.2
CD44-221ENST00000526000 KIAA1217Q5T5P2 1943 aa7.52□□□□□ -1.2
CD44-221ENST00000526000 MBLAC1A4D2B0 266 aaPredicted RBP7.52□□□□□ -1.21
CD44-221ENST00000526000 TMEM221A6NGB7 291 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 M0QZ92 97 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 M0R296 226 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 PIK3CDO00329 1044 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 SH2B2O14492 632 aaPredicted RBP7.52□□□□□ -1.21
CD44-221ENST00000526000 BACH1O14867 736 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 SGSM2O43147 1006 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 MMP1P03956 469 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 STAG3L1P0CL83 205 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 FGFR1P11362 822 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 SCG2P13521 617 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 GNAQP50148 359 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 STAT5BP51692 787 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 ACTR2P61160 394 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 KRT76Q01546 638 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 COL19A1Q14993 1142 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 HERC4Q5GLZ8 1057 aaPredicted RBP7.52□□□□□ -1.21
CD44-221ENST00000526000 MTHFD1LQ6UB35 978 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 TRIM67Q6ZTA4 783 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 NPAS4Q8IUM7 802 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 CMTR2Q8IYT2 770 aaKnown RBP7.52□□□□□ -1.21
CD44-221ENST00000526000 PRSS33Q8NF86 280 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 MAP4K1Q92918 833 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 MSLNLQ96KJ4 702 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 TCEANC2Q96MN5 208 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 ADAM2Q99965 735 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 MXRA8Q9BRK3 442 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 LZTS2Q9BRK4 669 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 SDF4Q9BRK5 362 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 PLVAPQ9BX97 442 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 SPZ1Q9BXG8 430 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 RC3H2Q9HBD1 1191 aaKnown RBP7.52□□□□□ -1.21
CD44-221ENST00000526000 JPH1Q9HDC5 661 aaPredicted RBP7.52□□□□□ -1.21
CD44-221ENST00000526000 KCNH7Q9NS40 1196 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 TYW1Q9NV66 732 aaKnown RBP7.52□□□□□ -1.21
CD44-221ENST00000526000 CDH22Q9UJ99 828 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 NAP1L2Q9ULW6 460 aaPredicted RBP7.52□□□□□ -1.21
CD44-221ENST00000526000 RWDD3Q9Y3V2 267 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 V9GY48 417 aaPredicted RBP7.52□□□□□ -1.21
CD44-221ENST00000526000 MICAL3Q7RTP6 2002 aa7.52□□□□□ -1.21
CD44-221ENST00000526000 MUC3AQ02505 3323 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 DENND3A2RUS2 1198 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 SLC27A2O14975 620 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 RPS6KA5O75582 802 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 DDAH1O94760 285 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 GLP2RO95838 553 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 VTNP04004 478 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 MCM5P33992 734 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 CA8P35219 290 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 PBX3P40426 434 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 NAPAP54920 295 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 ZXDAP98168 799 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 ITGB3BPQ13352 177 aaPredicted RBP7.51□□□□□ -1.21
CD44-221ENST00000526000 KIZQ2M2Z5 673 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 JAKMIP3Q5VZ66 844 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 PLPP4Q5VZY2 271 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 WWC2Q6AWC2 1192 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 TYW1BQ6NUM6 668 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 SWSAP1Q6NVH7 229 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 KANK3Q6NY19 840 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 CENPQQ7L2Z9 268 aaPredicted RBP7.51□□□□□ -1.21
CD44-221ENST00000526000 ZBTB33Q86T24 672 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 SKAP1Q86WV1 359 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 MICU3Q86XE3 530 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 CKAP2LQ8IYA6 745 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 THNSL1Q8IYQ7 743 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 KIAA0319LQ8IZA0 1049 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 METTL13Q8N6R0 699 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 EFHBQ8N7U6 833 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 FANCBQ8NB91 859 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 RNF169Q8NCN4 708 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 VN1R2Q8NFZ6 395 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 TMEM40Q8WWA1 233 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 PPP2R3CQ969Q6 453 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 CDHR1Q96JP9 859 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 POP1Q99575 1024 aaKnown RBP7.51□□□□□ -1.21
CD44-221ENST00000526000 AGO4Q9HCK5 861 aaKnown RBP7.51□□□□□ -1.21
CD44-221ENST00000526000 ST3GAL5Q9UNP4 418 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 PCDHB12Q9Y5F1 795 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 PCDHA2Q9Y5H9 948 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 SLC12A7Q9Y666 1083 aa7.51□□□□□ -1.21
CD44-221ENST00000526000 MYH6P13533 1939 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 DOCK5Q9H7D0 1870 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 SMCO2A6NFE2 343 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms