RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 CHUKO15111 745 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 TOM1O60784 492 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 SPAG7O75391 227 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 RHOBTB3O94955 611 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 NMT1P30419 496 aaKnown RBP7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 HSD17B3P37058 310 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 GCLMP48507 274 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 DYNLT1P63172 113 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 MTMR3Q13615 1198 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 TMED2Q15363 201 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 LONRF1Q17RB8 773 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 HHATQ5VTY9 493 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 AADACL2Q6P093 401 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 SEPT14Q6ZU15 432 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 KCNK18Q7Z418 384 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 VPS52Q8N1B4 723 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 KIAA0895Q8NCT3 520 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 MYCBPAPQ8TBZ2 947 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 BTBD6Q96KE9 485 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 TRIM7Q9C029 511 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 RAB17Q9H0T7 212 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 EPN3Q9H201 632 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 SLC40A1Q9NP59 571 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 SALL4Q9UJQ4 1053 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 GGA1Q9UJY5 639 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 MEGF6O75095 1541 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 WDR19Q8NEZ3 1342 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 A0A1W2PQC6 194 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 RSPH10B2B2RC85 870 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 RASGRF2O14827 1237 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 BAG2O95816 211 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 RSPH10BP0C881 870 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 ALDH3A1P30838 453 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 PPP1R2P41236 205 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 PPP2R2AP63151 447 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 LRCH2Q5VUJ6 765 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 FMNL3Q8IVF7 1028 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 MCUR1Q96AQ8 359 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 TLR10Q9BXR5 811 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 KLHL11Q9NVR0 708 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.53□□□□□ -1.21e-6■■■□□ 14.7
TGFBR3-207ENST00000525962 CPSF2Q9P2I0 782 aaKnown RBP7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 DNAJC12Q9UKB3 198 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 SUFUQ9UMX1 484 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 DLG5Q8TDM6 1919 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 PDS5AQ29RF7 1337 aaKnown RBP7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 FOXO6A8MYZ6 492 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 HMGB1P1B2RPK0 211 aaPredicted RBP7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 K7ENM7 598 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 ZNF263O14978 683 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 CASP4P49662 377 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 NFIXQ14938 502 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 PTGISQ16647 500 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 TAOK1Q7L7X3 1001 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 PASD1Q8IV76 773 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 PARP9Q8IXQ6 854 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 SLC30A5Q8TAD4 765 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 KAT2BQ92831 832 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 STMN2Q93045 179 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 SEC16BQ96JE7 1060 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 NAP1L3Q99457 506 aaPredicted RBP7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 PSMD1Q99460 953 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 KLHL14Q9P2G3 628 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 ITIH6Q6UXX5 1313 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 GAS7O60861 476 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 DIAPH2O60879 1101 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 MYCNP04198 464 aaPredicted RBP7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 MYBP10242 640 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 AKR1B1P15121 316 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 CHN1P15882 459 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 GNPTABQ3T906 1256 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 PAPD7Q5XG87 772 aaKnown RBP7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 PPP1R21Q6ZMI0 780 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 BRINP3Q76B58 766 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 METTL13Q8N6R0 699 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 SLC17A8Q8NDX2 589 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 NEK9Q8TD19 979 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 WHAMMQ8TF30 809 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 RAD54LQ92698 747 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 DNAJC7Q99615 494 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 DDX23Q9BUQ8 820 aaKnown RBP7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 BRIP1Q9BX63 1249 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 DBNDD1Q9H9R9 158 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 PLCB1Q9NQ66 1216 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 HOMER3Q9NSC5 361 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 DCTN4Q9UJW0 460 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 PLAGL2Q9UPG8 496 aa7.53□□□□□ -1.2
TGFBR3-207ENST00000525962 TMEM131LA2VDJ0 1609 aa7.52□□□□□ -1.2
TGFBR3-207ENST00000525962 TARSL2A2RTX5 802 aaKnown RBP7.52□□□□□ -1.21
TGFBR3-207ENST00000525962 IRX4P78413 519 aa7.52□□□□□ -1.21
TGFBR3-207ENST00000525962 PPP2R5DQ14738 602 aa7.52□□□□□ -1.21
TGFBR3-207ENST00000525962 C6orf163Q5TEZ5 329 aa7.52□□□□□ -1.21
TGFBR3-207ENST00000525962 KLHDC7AQ5VTJ3 777 aa7.52□□□□□ -1.21
TGFBR3-207ENST00000525962 BSPRYQ5W0U4 402 aa7.52□□□□□ -1.21
TGFBR3-207ENST00000525962 SLFN13Q68D06 897 aa7.52□□□□□ -1.21
TGFBR3-207ENST00000525962 PAF1Q8N7H5 531 aa7.52□□□□□ -1.21
TGFBR3-207ENST00000525962 ZNF653Q96CK0 615 aa7.52□□□□□ -1.21
TGFBR3-207ENST00000525962 SPDL1Q96EA4 605 aa7.52□□□□□ -1.21
TGFBR3-207ENST00000525962 RABGAP1Q9Y3P9 1069 aa7.52□□□□□ -1.21
TGFBR3-207ENST00000525962 KIF20BQ96Q89 1820 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms