RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 CDY2AQ9Y6F7 541 aa13.2□□□□□ -0.3
HIF3A-209ENST00000525854 SQORQ9Y6N5 450 aa13.2□□□□□ -0.3
HIF3A-209ENST00000525854 UNC80Q8N2C7 3258 aa13.2□□□□□ -0.3
HIF3A-209ENST00000525854 KAT6AQ92794 2004 aa13.2□□□□□ -0.3
HIF3A-209ENST00000525854 CDKL5O76039 1030 aa13.19□□□□□ -0.3
HIF3A-209ENST00000525854 UPP2O95045 317 aa13.19□□□□□ -0.3
HIF3A-209ENST00000525854 PSAPP07602 524 aa13.19□□□□□ -0.3
HIF3A-209ENST00000525854 AAK1Q2M2I8 961 aa13.19□□□□□ -0.3
HIF3A-209ENST00000525854 FBXO47Q5MNV8 452 aa13.19□□□□□ -0.3
HIF3A-209ENST00000525854 GALNT17Q6IS24 598 aa13.19□□□□□ -0.3
HIF3A-209ENST00000525854 FAM43BQ6ZT52 329 aaPredicted RBP13.19□□□□□ -0.3
HIF3A-209ENST00000525854 SP7Q8TDD2 431 aaPredicted RBP13.19□□□□□ -0.3
HIF3A-209ENST00000525854 RASGRP4Q8TDF6 673 aa13.19□□□□□ -0.3
HIF3A-209ENST00000525854 ATP8B4Q8TF62 1192 aa13.19□□□□□ -0.3
HIF3A-209ENST00000525854 SAMD11Q96NU1 681 aa13.19□□□□□ -0.3
HIF3A-209ENST00000525854 ASB2Q96Q27 587 aa13.19□□□□□ -0.3
HIF3A-209ENST00000525854 OSBPL7Q9BZF2 842 aa13.19□□□□□ -0.3
HIF3A-209ENST00000525854 MTUS1Q9ULD2 1270 aa13.19□□□□□ -0.3
HIF3A-209ENST00000525854 PCDHA4Q9UN74 947 aa13.19□□□□□ -0.3
HIF3A-209ENST00000525854 TTC28Q96AY4 2481 aa13.19□□□□□ -0.3
HIF3A-209ENST00000525854 COL1A2P08123 1366 aa13.19□□□□□ -0.3
HIF3A-209ENST00000525854 SMIM35A0A1B0GVV1 85 aa13.18□□□□□ -0.3
HIF3A-209ENST00000525854 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.18□□□□□ -0.3
HIF3A-209ENST00000525854 ADAMTS3O15072 1205 aa13.18□□□□□ -0.3
HIF3A-209ENST00000525854 LPXNO60711 386 aa13.18□□□□□ -0.3
HIF3A-209ENST00000525854 ANAPC15P60006 121 aa13.18□□□□□ -0.3
HIF3A-209ENST00000525854 STK3Q13188 491 aa13.18□□□□□ -0.3
HIF3A-209ENST00000525854 ZNF484Q5JVG2 852 aa13.18□□□□□ -0.3
HIF3A-209ENST00000525854 SWSAP1Q6NVH7 229 aa13.18□□□□□ -0.3
HIF3A-209ENST00000525854 MTHFD1LQ6UB35 978 aa13.18□□□□□ -0.3
HIF3A-209ENST00000525854 SPRED2Q7Z698 418 aa13.18□□□□□ -0.3
HIF3A-209ENST00000525854 CCDC60Q8IWA6 550 aaPredicted RBP13.18□□□□□ -0.3
HIF3A-209ENST00000525854 CKAP2LQ8IYA6 745 aa13.18□□□□□ -0.3
HIF3A-209ENST00000525854 TRAPPC12Q8WVT3 735 aa13.18□□□□□ -0.3
HIF3A-209ENST00000525854 FTHL17Q9BXU8 183 aa13.18□□□□□ -0.3
HIF3A-209ENST00000525854 SUGCTQ9HAC7 445 aa13.18□□□□□ -0.3
HIF3A-209ENST00000525854 PCDHA10Q9Y5I2 948 aa13.18□□□□□ -0.3
HIF3A-209ENST00000525854 TRPV2Q9Y5S1 764 aa13.18□□□□□ -0.3
HIF3A-209ENST00000525854 PRRC2BQ5JSZ5 2229 aaKnown RBP13.18□□□□□ -0.3
HIF3A-209ENST00000525854 CHD7Q9P2D1 2997 aa13.17□□□□□ -0.3
HIF3A-209ENST00000525854 EYSQ5T1H1 3165 aa13.17□□□□□ -0.3
HIF3A-209ENST00000525854 WDR64B1ANS9 1081 aa13.17□□□□□ -0.3
HIF3A-209ENST00000525854 KLRC1P26715 233 aa13.17□□□□□ -0.3
HIF3A-209ENST00000525854 ANKRD1Q15327 319 aa13.17□□□□□ -0.3
HIF3A-209ENST00000525854 KRT40Q6A162 431 aa13.17□□□□□ -0.3
HIF3A-209ENST00000525854 BLIDQ8IZY5 108 aa13.17□□□□□ -0.3
HIF3A-209ENST00000525854 FBXO22Q8NEZ5 403 aa13.17□□□□□ -0.3
HIF3A-209ENST00000525854 GDPD5Q8WTR4 605 aa13.17□□□□□ -0.3
HIF3A-209ENST00000525854 BBXQ8WY36 941 aaPredicted RBP13.17□□□□□ -0.3
HIF3A-209ENST00000525854 LENG9Q96B70 501 aa13.17□□□□□ -0.3
HIF3A-209ENST00000525854 ZBTB10Q96DT7 871 aa13.17□□□□□ -0.3
HIF3A-209ENST00000525854 IL17RAQ96F46 866 aa13.17□□□□□ -0.3
HIF3A-209ENST00000525854 FAM167AQ96KS9 214 aa13.17□□□□□ -0.3
HIF3A-209ENST00000525854 UIMC1Q96RL1 719 aa13.17□□□□□ -0.3
HIF3A-209ENST00000525854 RIT2Q99578 217 aa13.17□□□□□ -0.3
HIF3A-209ENST00000525854 LARP6Q9BRS8 491 aaKnown RBP13.17□□□□□ -0.3
HIF3A-209ENST00000525854 CELF4Q9BZC1 486 aaKnown RBP13.17□□□□□ -0.3
HIF3A-209ENST00000525854 SLKQ9H2G2 1235 aaPredicted RBP13.17□□□□□ -0.3
HIF3A-209ENST00000525854 COG5Q9UP83 839 aa13.17□□□□□ -0.3
HIF3A-209ENST00000525854 CEP131Q9UPN4 1083 aa13.17□□□□□ -0.3
HIF3A-209ENST00000525854 SAMM50Q9Y512 469 aa13.17□□□□□ -0.3
HIF3A-209ENST00000525854 MAFBQ9Y5Q3 323 aaPredicted RBP13.17□□□□□ -0.3
HIF3A-209ENST00000525854 PRUNE2Q8WUY3 3088 aa13.17□□□□□ -0.3
HIF3A-209ENST00000525854 IGSF9BQ9UPX0 1349 aa13.16□□□□□ -0.3
HIF3A-209ENST00000525854 KDM3AQ9Y4C1 1321 aa13.16□□□□□ -0.3
HIF3A-209ENST00000525854 PTPRSQ13332 1948 aa13.16□□□□□ -0.3
HIF3A-209ENST00000525854 ENPP3O14638 875 aa13.16□□□□□ -0.3
HIF3A-209ENST00000525854 GAS7O60861 476 aa13.16□□□□□ -0.3
HIF3A-209ENST00000525854 XBP1P17861 261 aa13.16□□□□□ -0.3
HIF3A-209ENST00000525854 TMEM62Q0P6H9 643 aa13.16□□□□□ -0.3
HIF3A-209ENST00000525854 PAK2Q13177 524 aa13.16□□□□□ -0.3
HIF3A-209ENST00000525854 PTPROQ16827 1216 aa13.16□□□□□ -0.3
HIF3A-209ENST00000525854 DAGLBQ8NCG7 672 aa13.16□□□□□ -0.3
HIF3A-209ENST00000525854 TBCKQ8TEA7 893 aa13.16□□□□□ -0.3
HIF3A-209ENST00000525854 C17orf80Q9BSJ5 609 aa13.16□□□□□ -0.3
HIF3A-209ENST00000525854 AGO3Q9H9G7 860 aaKnown RBP13.16□□□□□ -0.3
HIF3A-209ENST00000525854 GABBR1Q9UBS5 961 aa13.16□□□□□ -0.3
HIF3A-209ENST00000525854 MICAL3Q7RTP6 2002 aa13.16□□□□□ -0.3
HIF3A-209ENST00000525854 RBAK-RBAKDNI3L0D1 243 aa13.15□□□□□ -0.3
HIF3A-209ENST00000525854 MSH4O15457 936 aa13.15□□□□□ -0.3
HIF3A-209ENST00000525854 CD52P31358 61 aa13.15□□□□□ -0.3
HIF3A-209ENST00000525854 SFNP31947 248 aa13.15□□□□□ -0.3
HIF3A-209ENST00000525854 JAK3P52333 1124 aa13.15□□□□□ -0.3
HIF3A-209ENST00000525854 Q4G0T1 1027 aa13.15□□□□□ -0.3
HIF3A-209ENST00000525854 EPC2Q52LR7 807 aa13.15□□□□□ -0.3
HIF3A-209ENST00000525854 ODR4Q5SWX8 454 aa13.15□□□□□ -0.3
HIF3A-209ENST00000525854 LRCH2Q5VUJ6 765 aa13.15□□□□□ -0.3
HIF3A-209ENST00000525854 KIAA0319LQ8IZA0 1049 aa13.15□□□□□ -0.3
HIF3A-209ENST00000525854 FIBCD1Q8N539 461 aa13.15□□□□□ -0.3
HIF3A-209ENST00000525854 SLC5A5Q92911 643 aa13.15□□□□□ -0.3
HIF3A-209ENST00000525854 HLA-CQ95604 372 aa13.15□□□□□ -0.3
HIF3A-209ENST00000525854 TEKT3Q9BXF9 490 aa13.15□□□□□ -0.3
HIF3A-209ENST00000525854 DISC1Q9NRI5 854 aa13.15□□□□□ -0.3
HIF3A-209ENST00000525854 RWDD3Q9Y3V2 267 aa13.15□□□□□ -0.3
HIF3A-209ENST00000525854 CYP3A7-CYP3A51PA0A087WV96 503 aa13.14□□□□□ -0.31
HIF3A-209ENST00000525854 ZBTB42B2RXF5 422 aa13.14□□□□□ -0.31
HIF3A-209ENST00000525854 MAGEB2O15479 319 aa13.14□□□□□ -0.31
HIF3A-209ENST00000525854 PFKFB2O60825 505 aa13.14□□□□□ -0.31
HIF3A-209ENST00000525854 C22orf31O95567 290 aa13.14□□□□□ -0.31
HIF3A-209ENST00000525854 CENPBP07199 599 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms