RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 UNC45AQ9H3U1 944 aa20.92■□□□□ 0.94
TSPAN4-215ENST00000525334 BRMS1Q9HCU9 246 aa20.92■□□□□ 0.94
TSPAN4-215ENST00000525334 YBX2Q9Y2T7 364 aaKnown RBP20.92■□□□□ 0.94
TSPAN4-215ENST00000525334 MAFBQ9Y5Q3 323 aaPredicted RBP20.92■□□□□ 0.94
TSPAN4-215ENST00000525334 FAM205CA6NFA0 338 aa20.91■□□□□ 0.94
TSPAN4-215ENST00000525334 CHMP2AO43633 222 aa20.91■□□□□ 0.94
TSPAN4-215ENST00000525334 HBP1O60381 514 aa20.91■□□□□ 0.94
TSPAN4-215ENST00000525334 PSMD10O75832 226 aa20.91■□□□□ 0.94
TSPAN4-215ENST00000525334 MMP1P03956 469 aa20.91■□□□□ 0.94
TSPAN4-215ENST00000525334 ATP4AP20648 1035 aa20.91■□□□□ 0.94
TSPAN4-215ENST00000525334 KCNJ6P48051 423 aa20.91■□□□□ 0.94
TSPAN4-215ENST00000525334 PTPRSQ13332 1948 aa20.91■□□□□ 0.94
TSPAN4-215ENST00000525334 RSPH3Q86UC2 560 aa20.91■□□□□ 0.94
TSPAN4-215ENST00000525334 DBF4BQ8NFT6 615 aa20.91■□□□□ 0.94
TSPAN4-215ENST00000525334 PHOSPHO2Q8TCD6 241 aa20.91■□□□□ 0.94
TSPAN4-215ENST00000525334 DNAJB3Q8WWF6 145 aa20.91■□□□□ 0.94
TSPAN4-215ENST00000525334 TNFRSF25Q93038 417 aa20.91■□□□□ 0.94
TSPAN4-215ENST00000525334 LLPHQ9BRT6 129 aaKnown RBP20.91■□□□□ 0.94
TSPAN4-215ENST00000525334 NKX2-4Q9H2Z4 354 aa20.91■□□□□ 0.94
TSPAN4-215ENST00000525334 SH2B1Q9NRF2 756 aaPredicted RBP20.91■□□□□ 0.94
TSPAN4-215ENST00000525334 DISC1Q9NRI5 854 aa20.91■□□□□ 0.94
TSPAN4-215ENST00000525334 GABBR1Q9UBS5 961 aa20.91■□□□□ 0.94
TSPAN4-215ENST00000525334 IGSF9BQ9UPX0 1349 aa20.91■□□□□ 0.94
TSPAN4-215ENST00000525334 SIP14410 1827 aa20.9■□□□□ 0.94
TSPAN4-215ENST00000525334 ABHD14A-ACY1A0A1B0GW23 586 aa20.9■□□□□ 0.94
TSPAN4-215ENST00000525334 CHRNA1P02708 482 aa20.9■□□□□ 0.94
TSPAN4-215ENST00000525334 MYOGP15173 224 aa20.9■□□□□ 0.94
TSPAN4-215ENST00000525334 GCFC2P16383 781 aaKnown RBP20.9■□□□□ 0.94
TSPAN4-215ENST00000525334 MGAT3Q09327 533 aa20.9■□□□□ 0.94
TSPAN4-215ENST00000525334 TRIM29Q14134 588 aa20.9■□□□□ 0.94
TSPAN4-215ENST00000525334 IKBKEQ14164 716 aa20.9■□□□□ 0.94
TSPAN4-215ENST00000525334 PLEKHG4Q58EX7 1191 aa20.9■□□□□ 0.94
TSPAN4-215ENST00000525334 KRT40Q6A162 431 aa20.9■□□□□ 0.94
TSPAN4-215ENST00000525334 PPP4R3AQ6IN85 833 aa20.9■□□□□ 0.94
TSPAN4-215ENST00000525334 HERC6Q8IVU3 1022 aa20.9■□□□□ 0.94
TSPAN4-215ENST00000525334 CKAP2LQ8IYA6 745 aa20.9■□□□□ 0.94
TSPAN4-215ENST00000525334 SLC17A8Q8NDX2 589 aa20.9■□□□□ 0.94
TSPAN4-215ENST00000525334 MYLIPQ8WY64 445 aa20.9■□□□□ 0.94
TSPAN4-215ENST00000525334 FAM49AQ9H0Q0 323 aaPredicted RBP20.9■□□□□ 0.94
TSPAN4-215ENST00000525334 PCDHA2Q9Y5H9 948 aa20.9■□□□□ 0.94
TSPAN4-215ENST00000525334 PCDHA11Q9Y5I1 949 aa20.9■□□□□ 0.94
TSPAN4-215ENST00000525334 CHD9Q3L8U1 2897 aa20.9■□□□□ 0.94
TSPAN4-215ENST00000525334 COL1A2P08123 1366 aa20.89■□□□□ 0.93
TSPAN4-215ENST00000525334 MYH9P35579 1960 aaKnown RBP20.89■□□□□ 0.93
TSPAN4-215ENST00000525334 CCNT1O60563 726 aaKnown RBP20.89■□□□□ 0.93
TSPAN4-215ENST00000525334 EFCAB14O75071 495 aa20.89■□□□□ 0.93
TSPAN4-215ENST00000525334 SFNP31947 248 aa20.89■□□□□ 0.93
TSPAN4-215ENST00000525334 JAK3P52333 1124 aa20.89■□□□□ 0.93
TSPAN4-215ENST00000525334 DEFB103AP81534 67 aa20.89■□□□□ 0.93
TSPAN4-215ENST00000525334 MTHFD1LQ6UB35 978 aa20.89■□□□□ 0.93
TSPAN4-215ENST00000525334 DIS3L2Q8IYB7 885 aaKnown RBP20.89■□□□□ 0.93
TSPAN4-215ENST00000525334 WDR81Q562E7 1941 aa20.88■□□□□ 0.93
TSPAN4-215ENST00000525334 ZBTB42B2RXF5 422 aa20.88■□□□□ 0.93
TSPAN4-215ENST00000525334 BTBD18B2RXH4 712 aa20.88■□□□□ 0.93
TSPAN4-215ENST00000525334 MRPS6P82932 125 aaKnown RBP20.88■□□□□ 0.93
TSPAN4-215ENST00000525334 ZNF484Q5JVG2 852 aa20.88■□□□□ 0.93
TSPAN4-215ENST00000525334 B3GNT9Q6UX72 402 aa20.88■□□□□ 0.93
TSPAN4-215ENST00000525334 TRMT1LQ7Z2T5 733 aaKnown RBP20.88■□□□□ 0.93
TSPAN4-215ENST00000525334 TMCO2Q7Z6W1 182 aaPredicted RBP20.88■□□□□ 0.93
TSPAN4-215ENST00000525334 BBXQ8WY36 941 aaPredicted RBP20.88■□□□□ 0.93
TSPAN4-215ENST00000525334 SEPT8Q92599 483 aa20.88■□□□□ 0.93
TSPAN4-215ENST00000525334 NAP1L4Q99733 375 aaKnown RBP20.88■□□□□ 0.93
TSPAN4-215ENST00000525334 KCNMB3Q9NPA1 279 aa20.88■□□□□ 0.93
TSPAN4-215ENST00000525334 CDY2AQ9Y6F7 541 aa20.88■□□□□ 0.93
TSPAN4-215ENST00000525334 SMIM35A0A1B0GVV1 85 aa20.87■□□□□ 0.93
TSPAN4-215ENST00000525334 ST18O60284 1047 aa20.87■□□□□ 0.93
TSPAN4-215ENST00000525334 ZNF862O60290 1169 aa20.87■□□□□ 0.93
TSPAN4-215ENST00000525334 RPLP2P05387 115 aaKnown RBP20.87■□□□□ 0.93
TSPAN4-215ENST00000525334 KLRC1P26715 233 aa20.87■□□□□ 0.93
TSPAN4-215ENST00000525334 GUCY1B3Q02153 619 aa20.87■□□□□ 0.93
TSPAN4-215ENST00000525334 MKRN4PQ13434 485 aaPredicted RBP20.87■□□□□ 0.93
TSPAN4-215ENST00000525334 UGCGQ16739 394 aa20.87■□□□□ 0.93
TSPAN4-215ENST00000525334 MIER3Q7Z3K6 550 aa20.87■□□□□ 0.93
TSPAN4-215ENST00000525334 RDM1Q8NG50 284 aa20.87■□□□□ 0.93
TSPAN4-215ENST00000525334 TBC1D32Q96NH3 1257 aa20.87■□□□□ 0.93
TSPAN4-215ENST00000525334 SLC28A3Q9HAS3 691 aa20.87■□□□□ 0.93
TSPAN4-215ENST00000525334 MICAL3Q7RTP6 2002 aa20.87■□□□□ 0.93
TSPAN4-215ENST00000525334 GHRP10912 638 aa20.86■□□□□ 0.93
TSPAN4-215ENST00000525334 HMGN5P82970 282 aaKnown RBP20.86■□□□□ 0.93
TSPAN4-215ENST00000525334 PRKCEQ02156 737 aa20.86■□□□□ 0.93
TSPAN4-215ENST00000525334 TMEM62Q0P6H9 643 aa20.86■□□□□ 0.93
TSPAN4-215ENST00000525334 LPIN1Q14693 890 aa20.86■□□□□ 0.93
TSPAN4-215ENST00000525334 PPP2R2DQ66LE6 453 aa20.86■□□□□ 0.93
TSPAN4-215ENST00000525334 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.86■□□□□ 0.93
TSPAN4-215ENST00000525334 POTEDQ86YR6 584 aa20.86■□□□□ 0.93
TSPAN4-215ENST00000525334 C8orf76Q96K31 380 aa20.86■□□□□ 0.93
TSPAN4-215ENST00000525334 FAM167AQ96KS9 214 aa20.86■□□□□ 0.93
TSPAN4-215ENST00000525334 FAM20AQ96MK3 541 aa20.86■□□□□ 0.93
TSPAN4-215ENST00000525334 IFIH1Q9BYX4 1025 aaKnown RBP20.86■□□□□ 0.93
TSPAN4-215ENST00000525334 C22orf31O95567 290 aa20.85■□□□□ 0.93
TSPAN4-215ENST00000525334 OATP04181 439 aa20.85■□□□□ 0.93
TSPAN4-215ENST00000525334 CA3P07451 260 aa20.85■□□□□ 0.93
TSPAN4-215ENST00000525334 FOSL2P15408 326 aa20.85■□□□□ 0.93
TSPAN4-215ENST00000525334 FBXO47Q5MNV8 452 aa20.85■□□□□ 0.93
TSPAN4-215ENST00000525334 IER5Q5VY09 327 aa20.85■□□□□ 0.93
TSPAN4-215ENST00000525334 HAS1Q92839 578 aa20.85■□□□□ 0.93
TSPAN4-215ENST00000525334 APBB2Q92870 758 aa20.85■□□□□ 0.93
TSPAN4-215ENST00000525334 VAV3Q9UKW4 847 aa20.85■□□□□ 0.93
TSPAN4-215ENST00000525334 CEP131Q9UPN4 1083 aa20.85■□□□□ 0.93
TSPAN4-215ENST00000525334 TRPV2Q9Y5S1 764 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms