RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 UBXN7O94888 489 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 PAPLNO95428 1278 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 HSPA4LO95757 839 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 APPP05067 770 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 APOA4P06727 396 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 ACPPP15309 386 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 ATP2A2P16615 1042 aaKnown RBP5.09□□□□□ -1.59
CD44-213ENST00000525209 DESP17661 470 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 ARNTP27540 789 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 PDE6CP51160 858 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 UBXN2AP68543 259 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 PPP2R5BQ15173 497 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 TAF5Q15542 800 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 HSF5Q4G112 596 aaPredicted RBP5.09□□□□□ -1.59
CD44-213ENST00000525209 ZNF385CQ66K41 422 aaPredicted RBP5.09□□□□□ -1.59
CD44-213ENST00000525209 TXNDC11Q6PKC3 985 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 NPNTQ6UXI9 565 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 RIPOR1Q6ZS17 1223 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 MFSD6Q6ZSS7 791 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 GALNTL5Q7Z4T8 443 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 LRRTM4Q86VH4 590 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 SULF2Q8IWU5 870 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.09□□□□□ -1.59
CD44-213ENST00000525209 CMIPQ8IY22 773 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 SYTL1Q8IYJ3 562 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 RTKN2Q8IZC4 609 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 SVOPQ8N4V2 548 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 CAMKK1Q8N5S9 505 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 SIMC1Q8NDZ2 872 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 LILRB1Q8NHL6 650 aaPredicted RBP5.09□□□□□ -1.59
CD44-213ENST00000525209 LMBR1Q8WVP7 490 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 BRI3BPQ8WY22 251 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 LRTOMTQ8WZ04 291 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 JAKMIP2Q96AA8 810 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 MVB12AQ96EY5 273 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 MRGPRX3Q96LB0 322 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 NLRP3Q96P20 1036 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 DESI2Q9BSY9 194 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 MAGEH1Q9H213 219 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 DIAPH3Q9NSV4 1193 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 COMMD8Q9NX08 183 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 B4GALT6Q9UBX8 382 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 BLOC1S6Q9UL45 172 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 MAGED2Q9UNF1 606 aaPredicted RBP5.09□□□□□ -1.59
CD44-213ENST00000525209 PCDHGB2Q9Y5G2 931 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 PCDHA9Q9Y5H5 950 aa5.09□□□□□ -1.59
CD44-213ENST00000525209 KIF21AQ7Z4S6 1674 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 C17orf113A0A1B0GUU1 675 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 A0A1W2PPH5 198 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 WDR64B1ANS9 1081 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 FFAR2O15552 330 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 DOK2O60496 412 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 MGEA5O60502 916 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 B3GALNT1O75752 331 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 TRPA1O75762 1119 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 THP07101 528 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 SLC3A2P08195 630 aaKnown RBP5.08□□□□□ -1.6
CD44-213ENST00000525209 STMN1P16949 149 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 TNNT3P45378 269 aaPredicted RBP5.08□□□□□ -1.6
CD44-213ENST00000525209 CDK8P49336 464 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 FXR1P51114 621 aaKnown RBP eCLIP5.08□□□□□ -1.6
CD44-213ENST00000525209 AGFG1P52594 562 aaKnown RBP5.08□□□□□ -1.6
CD44-213ENST00000525209 NR1H2P55055 460 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 TPD52P55327 224 aaPredicted RBP5.08□□□□□ -1.6
CD44-213ENST00000525209 TYRO3Q06418 890 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 GALNT1Q10472 559 aaPredicted RBP5.08□□□□□ -1.6
CD44-213ENST00000525209 IFT88Q13099 833 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 GAS6Q14393 721 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 STARD3Q14849 445 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 CNN3Q15417 329 aaKnown RBP5.08□□□□□ -1.6
CD44-213ENST00000525209 DBN1Q16643 649 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 HSP90AB3PQ58FF7 597 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 BROXQ5VW32 411 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 SLC30A6Q6NXT4 461 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 APOA5Q6Q788 366 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 LMBR1LQ6UX01 489 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 NFXL1Q6ZNB6 911 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 PPFIBP1Q86W92 1011 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 SIAH1Q8IUQ4 282 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 IGSF22Q8N9C0 903 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 NAT8LQ8N9F0 302 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 MIGA1Q8NAN2 632 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 BVESQ8NE79 360 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 ATP2A3Q93084 1043 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 NXPE3Q969Y0 559 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 AIDAQ96BJ3 306 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 ZNF837Q96EG3 531 aaPredicted RBP5.08□□□□□ -1.6
CD44-213ENST00000525209 DHRS1Q96LJ7 313 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 GAS2L1Q99501 681 aaPredicted RBP5.08□□□□□ -1.6
CD44-213ENST00000525209 HAUS7Q99871 368 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 SLF1Q9BQI6 1058 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 EMILIN2Q9BXX0 1053 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 TXLNGYQ9BZA5 131 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 BTBD1Q9H0C5 482 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 KLHL25Q9H0H3 589 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 GHITMQ9H3K2 345 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 TRPV4Q9HBA0 871 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 CBX8Q9HC52 389 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 CABP5Q9NP86 173 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 PRDM6Q9NQX0 595 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms