RNA–Protein interactions for RNA: ENST00000524798.1

LTBP3-203, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-203ENST00000524798 FAM49AQ9H0Q0 323 aaPredicted RBP22.26■■□□□ 1.15
LTBP3-203ENST00000524798 AGO3Q9H9G7 860 aaKnown RBP22.26■■□□□ 1.15
LTBP3-203ENST00000524798 TCF20Q9UGU0 1960 aaKnown RBP22.25■■□□□ 1.15
LTBP3-203ENST00000524798 TTC3P53804 2025 aa22.25■■□□□ 1.15
LTBP3-203ENST00000524798 SMIM35A0A1B0GVV1 85 aa22.25■■□□□ 1.15
LTBP3-203ENST00000524798 IPO5O00410 1097 aaKnown RBP22.25■■□□□ 1.15
LTBP3-203ENST00000524798 HBP1O60381 514 aa22.25■■□□□ 1.15
LTBP3-203ENST00000524798 IFNAR1P17181 557 aa22.25■■□□□ 1.15
LTBP3-203ENST00000524798 PDIA3P30101 505 aaKnown RBP22.25■■□□□ 1.15
LTBP3-203ENST00000524798 CIITAP33076 1130 aa22.25■■□□□ 1.15
LTBP3-203ENST00000524798 FAM160B1Q5W0V3 765 aa22.25■■□□□ 1.15
LTBP3-203ENST00000524798 MTHFD1LQ6UB35 978 aa22.25■■□□□ 1.15
LTBP3-203ENST00000524798 ATP8B4Q8TF62 1192 aa22.25■■□□□ 1.15
LTBP3-203ENST00000524798 TRAPPC12Q8WVT3 735 aa22.25■■□□□ 1.15
LTBP3-203ENST00000524798 PHKBQ93100 1093 aa22.25■■□□□ 1.15
LTBP3-203ENST00000524798 RC3H2Q9HBD1 1191 aaKnown RBP22.25■■□□□ 1.15
LTBP3-203ENST00000524798 TRPV2Q9Y5S1 764 aa22.25■■□□□ 1.15
LTBP3-203ENST00000524798 BRWD1Q9NSI6 2320 aa22.25■■□□□ 1.15
LTBP3-203ENST00000524798 KDM3AQ9Y4C1 1321 aa22.25■■□□□ 1.15
LTBP3-203ENST00000524798 MUC3AQ02505 3323 aa22.24■■□□□ 1.15
LTBP3-203ENST00000524798 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.24■■□□□ 1.15
LTBP3-203ENST00000524798 SETQ01105 290 aaPredicted RBP22.24■■□□□ 1.15
LTBP3-203ENST00000524798 AKAP17AQ02040 695 aaKnown RBP22.24■■□□□ 1.15
LTBP3-203ENST00000524798 FAM43BQ6ZT52 329 aaPredicted RBP22.24■■□□□ 1.15
LTBP3-203ENST00000524798 CCDC60Q8IWA6 550 aaPredicted RBP22.24■■□□□ 1.15
LTBP3-203ENST00000524798 NECAB3Q96P71 396 aaPredicted RBP22.24■■□□□ 1.15
LTBP3-203ENST00000524798 CELF4Q9BZC1 486 aaKnown RBP22.24■■□□□ 1.15
LTBP3-203ENST00000524798 ZSWIM6Q9HCJ5 1215 aa22.24■■□□□ 1.15
LTBP3-203ENST00000524798 TBC1D22BQ9NU19 505 aa22.24■■□□□ 1.15
LTBP3-203ENST00000524798 DDX39AO00148 427 aaKnown RBP22.23■■□□□ 1.15
LTBP3-203ENST00000524798 LINC00271P0C7V0 271 aa22.23■■□□□ 1.15
LTBP3-203ENST00000524798 GPM6BQ13491 265 aa22.23■■□□□ 1.15
LTBP3-203ENST00000524798 PTPROQ16827 1216 aa22.23■■□□□ 1.15
LTBP3-203ENST00000524798 ZNF746Q6NUN9 644 aaPredicted RBP22.23■■□□□ 1.15
LTBP3-203ENST00000524798 MIS18BP1Q6P0N0 1132 aa22.23■■□□□ 1.15
LTBP3-203ENST00000524798 RUFY3Q7L099 469 aa22.23■■□□□ 1.15
LTBP3-203ENST00000524798 RTN4RL1Q86UN2 441 aaPredicted RBP22.23■■□□□ 1.15
LTBP3-203ENST00000524798 CRIPAKQ8N1N5 446 aa22.23■■□□□ 1.15
LTBP3-203ENST00000524798 FIBCD1Q8N539 461 aa22.23■■□□□ 1.15
LTBP3-203ENST00000524798 CCDC148Q8NFR7 591 aa22.23■■□□□ 1.15
LTBP3-203ENST00000524798 BICD2Q8TD16 824 aa22.23■■□□□ 1.15
LTBP3-203ENST00000524798 ZNF689Q96CS4 500 aaPredicted RBP22.23■■□□□ 1.15
LTBP3-203ENST00000524798 ZNF577Q9BSK1 485 aa22.23■■□□□ 1.15
LTBP3-203ENST00000524798 FTHL17Q9BXU8 183 aa22.23■■□□□ 1.15
LTBP3-203ENST00000524798 ZNF302Q9NR11 478 aa22.23■■□□□ 1.15
LTBP3-203ENST00000524798 IGSF9BQ9UPX0 1349 aa22.23■■□□□ 1.15
LTBP3-203ENST00000524798 COL1A2P08123 1366 aa22.23■■□□□ 1.15
LTBP3-203ENST00000524798 C5orf67F2Z3F1 127 aa22.22■■□□□ 1.15
LTBP3-203ENST00000524798 M0QZ92 97 aa22.22■■□□□ 1.15
LTBP3-203ENST00000524798 BACH1O14867 736 aa22.22■■□□□ 1.15
LTBP3-203ENST00000524798 RB1P06400 928 aa22.22■■□□□ 1.15
LTBP3-203ENST00000524798 KLRC1P26715 233 aa22.22■■□□□ 1.15
LTBP3-203ENST00000524798 CD52P31358 61 aa22.22■■□□□ 1.15
LTBP3-203ENST00000524798 LINC01599Q8WXQ3 324 aa22.22■■□□□ 1.15
LTBP3-203ENST00000524798 SH3GLB2Q9NR46 395 aa22.22■■□□□ 1.15
LTBP3-203ENST00000524798 DGKIO75912 1065 aa22.21■■□□□ 1.15
LTBP3-203ENST00000524798 ATP4AP20648 1035 aa22.21■■□□□ 1.15
LTBP3-203ENST00000524798 KRT76Q01546 638 aa22.21■■□□□ 1.15
LTBP3-203ENST00000524798 TMEM62Q0P6H9 643 aa22.21■■□□□ 1.15
LTBP3-203ENST00000524798 TOB2Q14106 344 aaPredicted RBP22.21■■□□□ 1.15
LTBP3-203ENST00000524798 ZNF484Q5JVG2 852 aa22.21■■□□□ 1.15
LTBP3-203ENST00000524798 SWSAP1Q6NVH7 229 aa22.21■■□□□ 1.15
LTBP3-203ENST00000524798 PDXDC2PQ6P474 469 aa22.21■■□□□ 1.15
LTBP3-203ENST00000524798 SMAP1Q8IYB5 467 aaPredicted RBP22.21■■□□□ 1.15
LTBP3-203ENST00000524798 CLP1Q92989 425 aaKnown RBP22.21■■□□□ 1.15
LTBP3-203ENST00000524798 LENG9Q96B70 501 aa22.21■■□□□ 1.15
LTBP3-203ENST00000524798 SLC26A6Q9BXS9 759 aa22.21■■□□□ 1.15
LTBP3-203ENST00000524798 TM6SF1Q9BZW5 370 aa22.21■■□□□ 1.15
LTBP3-203ENST00000524798 UBE2ZQ9H832 354 aaPredicted RBP22.21■■□□□ 1.15
LTBP3-203ENST00000524798 PADI3Q9ULW8 664 aa22.21■■□□□ 1.15
LTBP3-203ENST00000524798 RWDD3Q9Y3V2 267 aa22.21■■□□□ 1.15
LTBP3-203ENST00000524798 MAFBQ9Y5Q3 323 aaPredicted RBP22.21■■□□□ 1.15
LTBP3-203ENST00000524798 ADGRA3Q8IWK6 1321 aa22.21■■□□□ 1.15
LTBP3-203ENST00000524798 RALGAPA2Q2PPJ7 1873 aa22.2■■□□□ 1.14
LTBP3-203ENST00000524798 ZBTB42B2RXF5 422 aa22.2■■□□□ 1.14
LTBP3-203ENST00000524798 EDIL3O43854 480 aa22.2■■□□□ 1.14
LTBP3-203ENST00000524798 BMPR1AP36894 532 aa22.2■■□□□ 1.14
LTBP3-203ENST00000524798 CCT2P78371 535 aaKnown RBP22.2■■□□□ 1.14
LTBP3-203ENST00000524798 TIGD5Q53EQ6 642 aa22.2■■□□□ 1.14
LTBP3-203ENST00000524798 KIAA0319LQ8IZA0 1049 aa22.2■■□□□ 1.14
LTBP3-203ENST00000524798 RASGRP4Q8TDF6 673 aa22.2■■□□□ 1.14
LTBP3-203ENST00000524798 NCOA5Q9HCD5 579 aaKnown RBP22.2■■□□□ 1.14
LTBP3-203ENST00000524798 XIRP2A4UGR9 3374 aa22.2■■□□□ 1.14
LTBP3-203ENST00000524798 PPFIA3O75145 1194 aa22.19■■□□□ 1.14
LTBP3-203ENST00000524798 USP11P51784 963 aa22.19■■□□□ 1.14
LTBP3-203ENST00000524798 PRR16Q569H4 304 aa22.19■■□□□ 1.14
LTBP3-203ENST00000524798 BBXQ8WY36 941 aaPredicted RBP22.19■■□□□ 1.14
LTBP3-203ENST00000524798 ZNF274Q96GC6 653 aaPredicted RBP22.19■■□□□ 1.14
LTBP3-203ENST00000524798 UIMC1Q96RL1 719 aa22.19■■□□□ 1.14
LTBP3-203ENST00000524798 VPS54Q9P1Q0 977 aa22.19■■□□□ 1.14
LTBP3-203ENST00000524798 PCDHA10Q9Y5I2 948 aa22.19■■□□□ 1.14
LTBP3-203ENST00000524798 CYP46A1Q9Y6A2 500 aa22.19■■□□□ 1.14
LTBP3-203ENST00000524798 NLRC5Q86WI3 1866 aa22.19■■□□□ 1.14
LTBP3-203ENST00000524798 PSAPP07602 524 aa22.18■■□□□ 1.14
LTBP3-203ENST00000524798 PAK2Q13177 524 aa22.18■■□□□ 1.14
LTBP3-203ENST00000524798 COL19A1Q14993 1142 aa22.18■■□□□ 1.14
LTBP3-203ENST00000524798 LEXMQ3ZCV2 418 aa22.18■■□□□ 1.14
LTBP3-203ENST00000524798 NPAS4Q8IUM7 802 aa22.18■■□□□ 1.14
LTBP3-203ENST00000524798 BANK1Q8NDB2 785 aa22.18■■□□□ 1.14
LTBP3-203ENST00000524798 BDP1A6H8Y1 2624 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms