RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 LARGE1O95461 756 aa12.65□□□□□ -0.38
TRAPPC4-204ENST00000524797 RPLP2P05387 115 aaKnown RBP12.65□□□□□ -0.38
TRAPPC4-204ENST00000524797 ATP4AP20648 1035 aa12.65□□□□□ -0.38
TRAPPC4-204ENST00000524797 MRPS6P82932 125 aaKnown RBP12.65□□□□□ -0.38
TRAPPC4-204ENST00000524797 SWSAP1Q6NVH7 229 aa12.65□□□□□ -0.38
TRAPPC4-204ENST00000524797 PDXDC2PQ6P474 469 aa12.65□□□□□ -0.38
TRAPPC4-204ENST00000524797 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.65□□□□□ -0.38
TRAPPC4-204ENST00000524797 SMAP1Q8IYB5 467 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC4-204ENST00000524797 USP38Q8NB14 1042 aa12.65□□□□□ -0.38
TRAPPC4-204ENST00000524797 ATP8B4Q8TF62 1192 aa12.65□□□□□ -0.38
TRAPPC4-204ENST00000524797 APBB2Q92870 758 aa12.65□□□□□ -0.38
TRAPPC4-204ENST00000524797 SLC5A5Q92911 643 aa12.65□□□□□ -0.38
TRAPPC4-204ENST00000524797 RAD9AQ99638 391 aa12.65□□□□□ -0.38
TRAPPC4-204ENST00000524797 PHF20Q9BVI0 1012 aa12.65□□□□□ -0.38
TRAPPC4-204ENST00000524797 FAM49AQ9H0Q0 323 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC4-204ENST00000524797 CERS4Q9HA82 394 aa12.65□□□□□ -0.38
TRAPPC4-204ENST00000524797 TCEAL9Q9UHQ7 104 aa12.65□□□□□ -0.38
TRAPPC4-204ENST00000524797 RALGAPA2Q2PPJ7 1873 aa12.65□□□□□ -0.38
TRAPPC4-204ENST00000524797 CYP3A7-CYP3A51PA0A087WV96 503 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 EPOPA6NHQ4 379 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 PSAPP07602 524 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 GHRP10912 638 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 CYP3A7P24462 503 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 LPIN1Q14693 890 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 ME3Q16798 604 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 Q4G0T1 1027 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 ZNF484Q5JVG2 852 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 FAM117BQ6P1L5 589 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 MTHFD1LQ6UB35 978 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 KRT25Q7Z3Z0 450 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 NECAB1Q8N987 351 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 MBOAT7Q96N66 472 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 TRPV2Q9Y5S1 764 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 COL4A6Q14031 1691 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 SMIM35A0A1B0GVV1 85 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 RFXAPO00287 272 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 TDP2O95551 362 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 IGFBP4P22692 258 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 NEK4P51957 841 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 NONOQ15233 471 aaKnown RBP eCLIP12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 FBXO47Q5MNV8 452 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 SPRED2Q7Z698 418 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 MYOCDQ8IZQ8 938 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 GTF3C6Q969F1 213 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 RIT2Q99578 217 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 IFIH1Q9BYX4 1025 aaKnown RBP12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 ORC3Q9UBD5 711 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 GABBR1Q9UBS5 961 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 PCDHA10Q9Y5I2 948 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 MAFBQ9Y5Q3 323 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 CHD9Q3L8U1 2897 aa12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 LAMA2P24043 3122 aaKnown RBP12.64□□□□□ -0.39
TRAPPC4-204ENST00000524797 IGSF9BQ9UPX0 1349 aa12.63□□□□□ -0.39
TRAPPC4-204ENST00000524797 GAS7O60861 476 aa12.63□□□□□ -0.39
TRAPPC4-204ENST00000524797 KLRC1P26715 233 aa12.63□□□□□ -0.39
TRAPPC4-204ENST00000524797 LRCH2Q5VUJ6 765 aa12.63□□□□□ -0.39
TRAPPC4-204ENST00000524797 MOXD1Q6UVY6 613 aa12.63□□□□□ -0.39
TRAPPC4-204ENST00000524797 BBXQ8WY36 941 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC4-204ENST00000524797 ARNTL2Q8WYA1 636 aa12.63□□□□□ -0.39
TRAPPC4-204ENST00000524797 TEKT3Q9BXF9 490 aa12.63□□□□□ -0.39
TRAPPC4-204ENST00000524797 GJB4Q9NTQ9 266 aa12.63□□□□□ -0.39
TRAPPC4-204ENST00000524797 TTC3P53804 2025 aa12.63□□□□□ -0.39
TRAPPC4-204ENST00000524797 WDR64B1ANS9 1081 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 ZBTB42B2RXF5 422 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 FDPSP14324 419 aaKnown RBP12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 XBP1P17861 261 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 HTRA4P83105 476 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 TMEM62Q0P6H9 643 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 INF2Q27J81 1249 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 IER5Q5VY09 327 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 TSHZ1Q6ZSZ6 1077 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 CKAP2LQ8IYA6 745 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 PPM1EQ8WY54 764 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 WASF1Q92558 559 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 GJA10Q969M2 543 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 UNC45AQ9H3U1 944 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 DISC1Q9NRI5 854 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 KIAA1671Q9BY89 1806 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 CCDC194A0A1B0GVG4 234 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 LINC01553A4QN01 128 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 M0QZ92 97 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 PSMD10O75832 226 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 POU3F3P20264 500 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 JAK3P52333 1124 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 ERVK-21P61565 698 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 NME8Q8N427 588 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 NSUN7Q8NE18 718 aaKnown RBP12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 SP7Q8TDD2 431 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 OXER1Q8TDS5 423 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 TOP1MTQ969P6 601 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 FAM167AQ96KS9 214 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 CELF4Q9BZC1 486 aaKnown RBP12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 AGO3Q9H9G7 860 aaKnown RBP12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 SAMM50Q9Y512 469 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 INSL6Q9Y581 213 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 SQORQ9Y6N5 450 aa12.62□□□□□ -0.39
TRAPPC4-204ENST00000524797 KDM3AQ9Y4C1 1321 aa12.61□□□□□ -0.39
TRAPPC4-204ENST00000524797 CHMP2AO43633 222 aa12.61□□□□□ -0.39
TRAPPC4-204ENST00000524797 C22orf31O95567 290 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms