RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 POTEB3A0JP26 581 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 POTECB2RU33 542 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 KRIT1O00522 736 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 FLOT1O75955 427 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 AFPP02771 609 aaKnown RBP12.57□□□□□ -0.4
PTPRK-217ENST00000524534 SLC12A3P55017 1021 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 PPP2R2AP63151 447 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 GRAPQ13588 217 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 NFIXQ14938 502 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 POTEBQ6S5H4 581 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 DNAAF5Q86Y56 855 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 ADGRF4Q8IZF3 695 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 GRAPLQ8TC17 118 aaPredicted RBP12.57□□□□□ -0.4
PTPRK-217ENST00000524534 LMBR1Q8WVP7 490 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 FAM163AQ96GL9 167 aaPredicted RBP12.57□□□□□ -0.4
PTPRK-217ENST00000524534 ACTR5Q9H9F9 607 aaPredicted RBP12.57□□□□□ -0.4
PTPRK-217ENST00000524534 KLC4Q9NSK0 619 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 CNOT8Q9UFF9 292 aaKnown RBP12.57□□□□□ -0.4
PTPRK-217ENST00000524534 ARMCX3Q9UH62 379 aaPredicted RBP12.57□□□□□ -0.4
PTPRK-217ENST00000524534 SWAP70Q9UH65 585 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 ATF5Q9Y2D1 282 aaPredicted RBP12.57□□□□□ -0.4
PTPRK-217ENST00000524534 TNRC6CQ9HCJ0 1690 aaKnown RBP12.56□□□□□ -0.4
PTPRK-217ENST00000524534 ITGA4P13612 1032 aa12.56□□□□□ -0.4
PTPRK-217ENST00000524534 MRPL12P52815 198 aaKnown RBP12.56□□□□□ -0.4
PTPRK-217ENST00000524534 NPEPPSP55786 919 aa12.56□□□□□ -0.4
PTPRK-217ENST00000524534 JAM2P57087 298 aa12.56□□□□□ -0.4
PTPRK-217ENST00000524534 ZNF543Q08ER8 600 aa12.56□□□□□ -0.4
PTPRK-217ENST00000524534 EXOC3L4Q17RC7 722 aa12.56□□□□□ -0.4
PTPRK-217ENST00000524534 PEX26Q7Z412 305 aa12.56□□□□□ -0.4
PTPRK-217ENST00000524534 TMC3Q7Z5M5 1100 aa12.56□□□□□ -0.4
PTPRK-217ENST00000524534 PROCA1Q8NCQ7 364 aaPredicted RBP12.56□□□□□ -0.4
PTPRK-217ENST00000524534 NAP1L4Q99733 375 aaKnown RBP12.56□□□□□ -0.4
PTPRK-217ENST00000524534 KCNMB3Q9NPA1 279 aa12.56□□□□□ -0.4
PTPRK-217ENST00000524534 INTUQ9ULD6 942 aa12.56□□□□□ -0.4
PTPRK-217ENST00000524534 STRCQ7RTU9 1775 aa12.56□□□□□ -0.4
PTPRK-217ENST00000524534 DAPK3O43293 454 aa12.56□□□□□ -0.4
PTPRK-217ENST00000524534 TMOD1P28289 359 aa12.56□□□□□ -0.4
PTPRK-217ENST00000524534 CASP5P51878 434 aa12.56□□□□□ -0.4
PTPRK-217ENST00000524534 GABPAQ06546 454 aa12.56□□□□□ -0.4
PTPRK-217ENST00000524534 EPHA7Q15375 998 aa12.56□□□□□ -0.4
PTPRK-217ENST00000524534 QPCTQ16769 361 aa12.56□□□□□ -0.4
PTPRK-217ENST00000524534 CCDC121Q6ZUS5 278 aa12.56□□□□□ -0.4
PTPRK-217ENST00000524534 NT5DC3Q86UY8 548 aa12.56□□□□□ -0.4
PTPRK-217ENST00000524534 CCDC26Q8TAB7 109 aa12.56□□□□□ -0.4
PTPRK-217ENST00000524534 UBLCP1Q8WVY7 318 aaPredicted RBP12.56□□□□□ -0.4
PTPRK-217ENST00000524534 GPR101Q96P66 508 aaPredicted RBP12.56□□□□□ -0.4
PTPRK-217ENST00000524534 DHX36Q9H2U1 1008 aaKnown RBP12.56□□□□□ -0.4
PTPRK-217ENST00000524534 SIX2Q9NPC8 291 aa12.56□□□□□ -0.4
PTPRK-217ENST00000524534 AMACRQ9UHK6 382 aa12.56□□□□□ -0.4
PTPRK-217ENST00000524534 MYH4Q9Y623 1939 aa12.55□□□□□ -0.4
PTPRK-217ENST00000524534 GAKO14976 1311 aa12.55□□□□□ -0.4
PTPRK-217ENST00000524534 KIF13BQ9NQT8 1826 aa12.55□□□□□ -0.4
PTPRK-217ENST00000524534 TMCO5BA8MYB1 307 aa12.55□□□□□ -0.4
PTPRK-217ENST00000524534 CHUKO15111 745 aa12.55□□□□□ -0.4
PTPRK-217ENST00000524534 MED24O75448 989 aa12.55□□□□□ -0.4
PTPRK-217ENST00000524534 RPS6KA4O75676 772 aa12.55□□□□□ -0.4
PTPRK-217ENST00000524534 H2AFZP0C0S5 128 aa12.55□□□□□ -0.4
PTPRK-217ENST00000524534 HOXD13P35453 343 aa12.55□□□□□ -0.4
PTPRK-217ENST00000524534 POU5F1Q01860 360 aaKnown RBP12.55□□□□□ -0.4
PTPRK-217ENST00000524534 PTPROQ16827 1216 aa12.55□□□□□ -0.4
PTPRK-217ENST00000524534 KNOP1Q1ED39 458 aaKnown RBP12.55□□□□□ -0.4
PTPRK-217ENST00000524534 RC3H1Q5TC82 1133 aaKnown RBP12.55□□□□□ -0.4
PTPRK-217ENST00000524534 H2AFVQ71UI9 128 aa12.55□□□□□ -0.4
PTPRK-217ENST00000524534 EPM2AIP1Q7L775 607 aaPredicted RBP12.55□□□□□ -0.4
PTPRK-217ENST00000524534 SYCE1Q8N0S2 351 aa12.55□□□□□ -0.4
PTPRK-217ENST00000524534 RAPGEF5Q92565 580 aa12.55□□□□□ -0.4
PTPRK-217ENST00000524534 HES6Q96HZ4 224 aa12.55□□□□□ -0.4
PTPRK-217ENST00000524534 OSBPL7Q9BZF2 842 aa12.55□□□□□ -0.4
PTPRK-217ENST00000524534 CD209Q9NNX6 404 aa12.55□□□□□ -0.4
PTPRK-217ENST00000524534 SLC40A1Q9NP59 571 aa12.55□□□□□ -0.4
PTPRK-217ENST00000524534 TTC7AQ9ULT0 858 aaPredicted RBP12.55□□□□□ -0.4
PTPRK-217ENST00000524534 NOVA2Q9UNW9 492 aaKnown RBP12.55□□□□□ -0.4
PTPRK-217ENST00000524534 F8VZ95 297 aa12.54□□□□□ -0.4
PTPRK-217ENST00000524534 KRT18P05783 430 aaKnown RBP12.54□□□□□ -0.4
PTPRK-217ENST00000524534 AKR1B1P15121 316 aa12.54□□□□□ -0.4
PTPRK-217ENST00000524534 BYSLQ13895 437 aaKnown RBP12.54□□□□□ -0.4
PTPRK-217ENST00000524534 GIT2Q14161 759 aa12.54□□□□□ -0.4
PTPRK-217ENST00000524534 ARMC9Q7Z3E5 817 aa12.54□□□□□ -0.4
PTPRK-217ENST00000524534 SEC16BQ96JE7 1060 aa12.54□□□□□ -0.4
PTPRK-217ENST00000524534 TXLNGYQ9BZA5 131 aa12.54□□□□□ -0.4
PTPRK-217ENST00000524534 PSTPIP2Q9H939 334 aa12.54□□□□□ -0.4
PTPRK-217ENST00000524534 FAM114A2Q9NRY5 505 aa12.54□□□□□ -0.4
PTPRK-217ENST00000524534 BCCIPQ9P287 314 aaKnown RBP eCLIP12.54□□□□□ -0.4
PTPRK-217ENST00000524534 AJAP1Q9UKB5 411 aaPredicted RBP12.54□□□□□ -0.4
PTPRK-217ENST00000524534 CYP3A7-CYP3A51PA0A087WV96 503 aa12.54□□□□□ -0.4
PTPRK-217ENST00000524534 DDX3XO00571 662 aaKnown RBP eCLIP12.54□□□□□ -0.49e-10■□□□□ 10.8
PTPRK-217ENST00000524534 PDXKO00764 312 aa12.54□□□□□ -0.4
PTPRK-217ENST00000524534 ZBTB5O15062 677 aa12.54□□□□□ -0.4
PTPRK-217ENST00000524534 TTI1O43156 1089 aa12.54□□□□□ -0.4
PTPRK-217ENST00000524534 XRCC5P13010 732 aaKnown RBP12.54□□□□□ -0.4
PTPRK-217ENST00000524534 IL1R1P14778 569 aa12.54□□□□□ -0.4
PTPRK-217ENST00000524534 CYP3A7P24462 503 aa12.54□□□□□ -0.4
PTPRK-217ENST00000524534 MAP2K2P36507 400 aa12.54□□□□□ -0.4
PTPRK-217ENST00000524534 EIF6P56537 245 aaKnown RBP12.54□□□□□ -0.4
PTPRK-217ENST00000524534 ODF2Q5BJF6 829 aa12.54□□□□□ -0.4
PTPRK-217ENST00000524534 SPDYCQ5MJ68 293 aa12.54□□□□□ -0.4
PTPRK-217ENST00000524534 TTBK2Q6IQ55 1244 aa12.54□□□□□ -0.4
PTPRK-217ENST00000524534 VPS36Q86VN1 386 aa12.54□□□□□ -0.4
PTPRK-217ENST00000524534 TATDN2Q93075 761 aa12.54□□□□□ -0.4
PTPRK-217ENST00000524534 ZKSCAN4Q969J2 545 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms