RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 TTC38Q5R3I4 469 aa14.1□□□□□ -0.15
CCNC-216ENST00000523961 TAF2Q6P1X5 1199 aa14.1□□□□□ -0.15
CCNC-216ENST00000523961 LRRC8DQ7L1W4 858 aa14.1□□□□□ -0.15
CCNC-216ENST00000523961 SCLYQ96I15 445 aa14.1□□□□□ -0.15
CCNC-216ENST00000523961 PCDHA12Q9UN75 941 aa14.1□□□□□ -0.15
CCNC-216ENST00000523961 KAT6AQ92794 2004 aa14.1□□□□□ -0.15
CCNC-216ENST00000523961 COL1A2P08123 1366 aa14.09□□□□□ -0.15
CCNC-216ENST00000523961 TRIP12Q14669 1992 aaPredicted RBP14.09□□□□□ -0.15
CCNC-216ENST00000523961 TRIOBPQ9H2D6 2365 aa14.09□□□□□ -0.15
CCNC-216ENST00000523961 RPLP2P05387 115 aaKnown RBP14.09□□□□□ -0.15
CCNC-216ENST00000523961 PFKMP08237 780 aa14.09□□□□□ -0.15
CCNC-216ENST00000523961 ATP4AP20648 1035 aa14.09□□□□□ -0.15
CCNC-216ENST00000523961 THPOP40225 353 aa14.09□□□□□ -0.15
CCNC-216ENST00000523961 SHHQ15465 462 aa14.09□□□□□ -0.15
CCNC-216ENST00000523961 ZNF174Q15697 407 aa14.09□□□□□ -0.15
CCNC-216ENST00000523961 MARCH8Q5T0T0 291 aa14.09□□□□□ -0.15
CCNC-216ENST00000523961 PSRC1Q6PGN9 363 aaPredicted RBP14.09□□□□□ -0.15
CCNC-216ENST00000523961 RSPH3Q86UC2 560 aa14.09□□□□□ -0.15
CCNC-216ENST00000523961 WNT8BQ93098 351 aa14.09□□□□□ -0.15
CCNC-216ENST00000523961 MTMR9Q96QG7 549 aa14.09□□□□□ -0.15
CCNC-216ENST00000523961 TTC12Q9H892 705 aaPredicted RBP14.09□□□□□ -0.15
CCNC-216ENST00000523961 NRBP2Q9NSY0 501 aa14.09□□□□□ -0.15
CCNC-216ENST00000523961 CEP131Q9UPN4 1083 aa14.09□□□□□ -0.15
CCNC-216ENST00000523961 EML1O00423 815 aa14.08□□□□□ -0.16
CCNC-216ENST00000523961 ZNF862O60290 1169 aa14.08□□□□□ -0.16
CCNC-216ENST00000523961 DKC1O60832 514 aaKnown RBP eCLIP14.08□□□□□ -0.161e-5■□□□□ 10.7
CCNC-216ENST00000523961 OATP04181 439 aa14.08□□□□□ -0.16
CCNC-216ENST00000523961 ACRP10323 421 aa14.08□□□□□ -0.16
CCNC-216ENST00000523961 TXKP42681 527 aa14.08□□□□□ -0.16
CCNC-216ENST00000523961 PSMC5P62195 406 aa14.08□□□□□ -0.16
CCNC-216ENST00000523961 PRKCEQ02156 737 aa14.08□□□□□ -0.16
CCNC-216ENST00000523961 SPIRE1Q08AE8 756 aa14.08□□□□□ -0.16
CCNC-216ENST00000523961 EPHA7Q15375 998 aa14.08□□□□□ -0.16
CCNC-216ENST00000523961 UGCGQ16739 394 aa14.08□□□□□ -0.16
CCNC-216ENST00000523961 RILPL1Q5EBL4 403 aa14.08□□□□□ -0.16
CCNC-216ENST00000523961 TMEM240Q5SV17 173 aa14.08□□□□□ -0.16
CCNC-216ENST00000523961 C9orf50Q5SZB4 431 aa14.08□□□□□ -0.16
CCNC-216ENST00000523961 ZNF618Q5T7W0 954 aa14.08□□□□□ -0.16
CCNC-216ENST00000523961 NCAPH2Q6IBW4 605 aa14.08□□□□□ -0.16
CCNC-216ENST00000523961 ZNF365Q70YC5 407 aa14.08□□□□□ -0.16
CCNC-216ENST00000523961 C16orf59Q7L2K0 433 aa14.08□□□□□ -0.16
CCNC-216ENST00000523961 TRMT1LQ7Z2T5 733 aaKnown RBP14.08□□□□□ -0.16
CCNC-216ENST00000523961 RPAINQ86UA6 219 aa14.08□□□□□ -0.16
CCNC-216ENST00000523961 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.08□□□□□ -0.16
CCNC-216ENST00000523961 TMEM60Q9H2L4 133 aa14.08□□□□□ -0.16
CCNC-216ENST00000523961 MYH9P35579 1960 aaKnown RBP14.07□□□□□ -0.16
CCNC-216ENST00000523961 RSPH10B2B2RC85 870 aa14.07□□□□□ -0.16
CCNC-216ENST00000523961 FGBP02675 491 aa14.07□□□□□ -0.16
CCNC-216ENST00000523961 P4HBP07237 508 aaKnown RBP14.07□□□□□ -0.16
CCNC-216ENST00000523961 OR52Z1P0C646 297 aa14.07□□□□□ -0.16
CCNC-216ENST00000523961 RSPH10BP0C881 870 aa14.07□□□□□ -0.16
CCNC-216ENST00000523961 KLRC1P26715 233 aa14.07□□□□□ -0.16
CCNC-216ENST00000523961 QARSP47897 775 aaKnown RBP14.07□□□□□ -0.16
CCNC-216ENST00000523961 TOB1P50616 345 aaPredicted RBP14.07□□□□□ -0.16
CCNC-216ENST00000523961 XKR3Q5GH77 459 aa14.07□□□□□ -0.16
CCNC-216ENST00000523961 MTHFD1LQ6UB35 978 aa14.07□□□□□ -0.16
CCNC-216ENST00000523961 RUFY4Q6ZNE9 571 aa14.07□□□□□ -0.16
CCNC-216ENST00000523961 DEFB128Q7Z7B8 93 aa14.07□□□□□ -0.16
CCNC-216ENST00000523961 TRAPPC12Q8WVT3 735 aa14.07□□□□□ -0.16
CCNC-216ENST00000523961 RNPC3Q96LT9 517 aaKnown RBP14.07□□□□□ -0.16
CCNC-216ENST00000523961 MTIF3Q9H2K0 278 aaKnown RBP14.07□□□□□ -0.16
CCNC-216ENST00000523961 PCDHA2Q9Y5H9 948 aa14.07□□□□□ -0.16
CCNC-216ENST00000523961 SMIM35A0A1B0GVV1 85 aa14.06□□□□□ -0.16
CCNC-216ENST00000523961 VPS37CA5D8V6 355 aaPredicted RBP14.06□□□□□ -0.16
CCNC-216ENST00000523961 ZBTB42B2RXF5 422 aa14.06□□□□□ -0.16
CCNC-216ENST00000523961 MAGEB2O15479 319 aa14.06□□□□□ -0.16
CCNC-216ENST00000523961 HSP90AA1P07900 732 aaKnown RBP14.06□□□□□ -0.16
CCNC-216ENST00000523961 ACTN1P12814 892 aa14.06□□□□□ -0.16
CCNC-216ENST00000523961 SYT1P21579 422 aa14.06□□□□□ -0.16
CCNC-216ENST00000523961 LRIT3Q3SXY7 679 aa14.06□□□□□ -0.16
CCNC-216ENST00000523961 FAM26DQ5JW98 314 aa14.06□□□□□ -0.16
CCNC-216ENST00000523961 TRAF7Q6Q0C0 670 aa14.06□□□□□ -0.16
CCNC-216ENST00000523961 BRAPQ7Z569 592 aa14.06□□□□□ -0.16
CCNC-216ENST00000523961 BANK1Q8NDB2 785 aa14.06□□□□□ -0.16
CCNC-216ENST00000523961 NEK9Q8TD19 979 aa14.06□□□□□ -0.16
CCNC-216ENST00000523961 DNAJB3Q8WWF6 145 aa14.06□□□□□ -0.16
CCNC-216ENST00000523961 HERVK_113Q902F9 699 aa14.06□□□□□ -0.16
CCNC-216ENST00000523961 FTOQ9C0B1 505 aaKnown RBP eCLIP14.06□□□□□ -0.16
CCNC-216ENST00000523961 PCDHB6Q9Y5E3 794 aa14.06□□□□□ -0.16
CCNC-216ENST00000523961 LAD1O00515 517 aa14.05□□□□□ -0.16
CCNC-216ENST00000523961 NBNO60934 754 aa14.05□□□□□ -0.16
CCNC-216ENST00000523961 CXCL10P02778 98 aa14.05□□□□□ -0.16
CCNC-216ENST00000523961 CTSHP09668 335 aa14.05□□□□□ -0.16
CCNC-216ENST00000523961 NBR1Q14596 966 aa14.05□□□□□ -0.16
CCNC-216ENST00000523961 GPNMBQ14956 572 aa14.05□□□□□ -0.16
CCNC-216ENST00000523961 TMEM266Q2M3C6 531 aa14.05□□□□□ -0.16
CCNC-216ENST00000523961 C4orf19Q8IY42 314 aa14.05□□□□□ -0.16
CCNC-216ENST00000523961 NME8Q8N427 588 aa14.05□□□□□ -0.16
CCNC-216ENST00000523961 C4orf32Q8N8J7 132 aa14.05□□□□□ -0.16
CCNC-216ENST00000523961 VWCEQ96DN2 955 aa14.05□□□□□ -0.16
CCNC-216ENST00000523961 ZBTB10Q96DT7 871 aa14.05□□□□□ -0.16
CCNC-216ENST00000523961 DYDC2Q96IM9 177 aa14.05□□□□□ -0.16
CCNC-216ENST00000523961 EIF2AK1Q9BQI3 630 aaKnown RBP14.05□□□□□ -0.16
CCNC-216ENST00000523961 NIFKQ9BYG3 293 aaKnown RBP14.05□□□□□ -0.16
CCNC-216ENST00000523961 FAM49AQ9H0Q0 323 aaPredicted RBP14.05□□□□□ -0.16
CCNC-216ENST00000523961 ZSWIM4Q9H7M6 989 aa14.05□□□□□ -0.16
CCNC-216ENST00000523961 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.05□□□□□ -0.16
CCNC-216ENST00000523961 SEPT9Q9UHD8 586 aaPredicted RBP14.05□□□□□ -0.16
CCNC-216ENST00000523961 TANC1Q9C0D5 1861 aa14.05□□□□□ -0.16
CCNC-216ENST00000523961 DDX11L8A8MPP1 907 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms