RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 SUGCTQ9HAC7 445 aa10.07□□□□□ -0.8
CTNNA1-240ENST00000523912 ZNF302Q9NR11 478 aa10.07□□□□□ -0.8
CTNNA1-240ENST00000523912 FAM217BQ9NTX9 383 aaPredicted RBP10.07□□□□□ -0.8
CTNNA1-240ENST00000523912 TBC1D22BQ9NU19 505 aa10.07□□□□□ -0.8
CTNNA1-240ENST00000523912 PCDHA2Q9Y5H9 948 aa10.07□□□□□ -0.8
CTNNA1-240ENST00000523912 TRPV2Q9Y5S1 764 aa10.07□□□□□ -0.8
CTNNA1-240ENST00000523912 CYP46A1Q9Y6A2 500 aa10.07□□□□□ -0.8
CTNNA1-240ENST00000523912 CDY2AQ9Y6F7 541 aa10.07□□□□□ -0.8
CTNNA1-240ENST00000523912 COL1A2P08123 1366 aa10.06□□□□□ -0.8
CTNNA1-240ENST00000523912 IPO5O00410 1097 aaKnown RBP10.06□□□□□ -0.8
CTNNA1-240ENST00000523912 HBP1O60381 514 aa10.06□□□□□ -0.8
CTNNA1-240ENST00000523912 CYP3A4P08684 503 aa10.06□□□□□ -0.8
CTNNA1-240ENST00000523912 IFNAR1P17181 557 aa10.06□□□□□ -0.8
CTNNA1-240ENST00000523912 KRT76Q01546 638 aa10.06□□□□□ -0.8
CTNNA1-240ENST00000523912 MGAT3Q09327 533 aa10.06□□□□□ -0.8
CTNNA1-240ENST00000523912 LPIN1Q14693 890 aa10.06□□□□□ -0.8
CTNNA1-240ENST00000523912 FBXO47Q5MNV8 452 aa10.06□□□□□ -0.8
CTNNA1-240ENST00000523912 ODR4Q5SWX8 454 aa10.06□□□□□ -0.8
CTNNA1-240ENST00000523912 MARCH8Q5T0T0 291 aa10.06□□□□□ -0.8
CTNNA1-240ENST00000523912 KRT40Q6A162 431 aa10.06□□□□□ -0.8
CTNNA1-240ENST00000523912 ZNF746Q6NUN9 644 aaPredicted RBP10.06□□□□□ -0.8
CTNNA1-240ENST00000523912 PDXDC2PQ6P474 469 aa10.06□□□□□ -0.8
CTNNA1-240ENST00000523912 CKAP2LQ8IYA6 745 aa10.06□□□□□ -0.8
CTNNA1-240ENST00000523912 SMAP1Q8IYB5 467 aaPredicted RBP10.06□□□□□ -0.8
CTNNA1-240ENST00000523912 NME8Q8N427 588 aa10.06□□□□□ -0.8
CTNNA1-240ENST00000523912 FIBCD1Q8N539 461 aa10.06□□□□□ -0.8
CTNNA1-240ENST00000523912 PHKBQ93100 1093 aa10.06□□□□□ -0.8
CTNNA1-240ENST00000523912 FAM167AQ96KS9 214 aa10.06□□□□□ -0.8
CTNNA1-240ENST00000523912 PCYT2Q99447 389 aa10.06□□□□□ -0.8
CTNNA1-240ENST00000523912 C17orf80Q9BSJ5 609 aa10.06□□□□□ -0.8
CTNNA1-240ENST00000523912 C22orf23Q9BZE7 217 aa10.06□□□□□ -0.8
CTNNA1-240ENST00000523912 RNF216Q9NWF9 866 aaPredicted RBP10.06□□□□□ -0.8
CTNNA1-240ENST00000523912 SQORQ9Y6N5 450 aa10.06□□□□□ -0.8
CTNNA1-240ENST00000523912 ADGRA3Q8IWK6 1321 aa10.06□□□□□ -0.8
CTNNA1-240ENST00000523912 MUC3AQ02505 3323 aa10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 MUC6Q6W4X9 2439 aa10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 SMIM35A0A1B0GVV1 85 aa10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 FAM86B1E9PN63 330 aa10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 CDKL5O76039 1030 aa10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 PSAPP07602 524 aa10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 FAM86B2P0C5J1 330 aa10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 STAG3L1P0CL83 205 aa10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 CTNNB1P35222 781 aa10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 NLRP5P59047 1200 aa10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 EPC2Q52LR7 807 aa10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 PRR16Q569H4 304 aa10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 ZNF484Q5JVG2 852 aa10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 MTHFD1LQ6UB35 978 aa10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 RUFY3Q7L099 469 aa10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 SPRED2Q7Z698 418 aa10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 TMEM192Q8IY95 271 aa10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 FAM177A1Q8N128 213 aaPredicted RBP10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 MRPL38Q96DV4 380 aaKnown RBP10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 C11orf84Q9BUA3 381 aaPredicted RBP10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 AGXT2Q9BYV1 514 aa10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 KCNH6Q9H252 994 aa10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 UBE2ZQ9H832 354 aaPredicted RBP10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 SH3GLB2Q9NR46 395 aa10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 CEP131Q9UPN4 1083 aa10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 SAMM50Q9Y512 469 aa10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 COL4A6Q14031 1691 aa10.05□□□□□ -0.8
CTNNA1-240ENST00000523912 IGKV6D-21A0A0A0MT36 114 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 PRR33A8MZF0 331 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 WDR64B1ANS9 1081 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 EIF5BO60841 1220 aaKnown RBP10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 ATG7O95352 703 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 CCNE2O96020 404 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 RB1P06400 928 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 ALADP13716 330 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 PDIA3P30101 505 aaKnown RBP10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 CD52P31358 61 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 CIITAP33076 1130 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 EVCP57679 992 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 CCT2P78371 535 aaKnown RBP10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 SSRP1Q08945 709 aaKnown RBP10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 TMEM62Q0P6H9 643 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 GPM6BQ13491 265 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 BTG3Q14201 252 aaPredicted RBP10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 PKN1Q16512 942 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 SWSAP1Q6NVH7 229 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 ABHD15Q6UXT9 468 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 NPAS4Q8IUM7 802 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 CCDC60Q8IWA6 550 aaPredicted RBP10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 FAM178BQ8IXR5 827 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 BBXQ8WY36 941 aaPredicted RBP10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 CELF4Q9BZC1 486 aaKnown RBP10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 TM6SF1Q9BZW5 370 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 ZSWIM6Q9HCJ5 1215 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 C11orf16Q9NQ32 467 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 VPS54Q9P1Q0 977 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 GINS2Q9Y248 185 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 PCDHA10Q9Y5I2 948 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 IGSF9BQ9UPX0 1349 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 KDM3AQ9Y4C1 1321 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 MICAL3Q7RTP6 2002 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 KAT6AQ92794 2004 aa10.04□□□□□ -0.8
CTNNA1-240ENST00000523912 IGLV3-22A0A075B6J6 115 aa10.03□□□□□ -0.8
CTNNA1-240ENST00000523912 H3BNC9 293 aa10.03□□□□□ -0.8
CTNNA1-240ENST00000523912 ENPP3O14638 875 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms