RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 DDX46Q7L014 1031 aaKnown RBP6.57□□□□□ -1.36
PCM1-219ENST00000523540 STRA8Q7Z7C7 330 aa6.57□□□□□ -1.36
PCM1-219ENST00000523540 SP8Q8IXZ3 490 aa6.57□□□□□ -1.36
PCM1-219ENST00000523540 SMC1BQ8NDV3 1235 aa6.57□□□□□ -1.36
PCM1-219ENST00000523540 GORASP1Q9BQQ3 440 aa6.57□□□□□ -1.36
PCM1-219ENST00000523540 KRTAP9-8Q9BYQ0 159 aa6.57□□□□□ -1.36
PCM1-219ENST00000523540 TMPRSS5Q9H3S3 457 aa6.57□□□□□ -1.36
PCM1-219ENST00000523540 RBPJLQ9UBG7 517 aa6.57□□□□□ -1.36
PCM1-219ENST00000523540 ZKSCAN5Q9Y2L8 839 aa6.57□□□□□ -1.36
PCM1-219ENST00000523540 GAS7O60861 476 aa6.56□□□□□ -1.36
PCM1-219ENST00000523540 SDHAP31040 664 aa6.56□□□□□ -1.36
PCM1-219ENST00000523540 THBS2P35442 1172 aa6.56□□□□□ -1.36
PCM1-219ENST00000523540 SCNN1BP51168 640 aa6.56□□□□□ -1.36
PCM1-219ENST00000523540 DBPQ10586 325 aaPredicted RBP6.56□□□□□ -1.36
PCM1-219ENST00000523540 CD276Q5ZPR3 534 aa6.56□□□□□ -1.36
PCM1-219ENST00000523540 LIPIQ6XZB0 460 aa6.56□□□□□ -1.36
PCM1-219ENST00000523540 AFAP1L2Q8N4X5 818 aa6.56□□□□□ -1.36
PCM1-219ENST00000523540 OR2W6PQ8NHA6 318 aa6.56□□□□□ -1.36
PCM1-219ENST00000523540 NOX5Q96PH1 765 aa6.56□□□□□ -1.36
PCM1-219ENST00000523540 C11orf84Q9BUA3 381 aaPredicted RBP6.56□□□□□ -1.36
PCM1-219ENST00000523540 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.56□□□□□ -1.36
PCM1-219ENST00000523540 OXSMQ9NWU1 459 aa6.56□□□□□ -1.36
PCM1-219ENST00000523540 RASSF10A6NK89 507 aa6.55□□□□□ -1.36
PCM1-219ENST00000523540 H7C1D1 291 aa6.55□□□□□ -1.36
PCM1-219ENST00000523540 HIP1RO75146 1068 aa6.55□□□□□ -1.36
PCM1-219ENST00000523540 BPIP17213 487 aa6.55□□□□□ -1.36
PCM1-219ENST00000523540 ITGA1P56199 1179 aa6.55□□□□□ -1.36
PCM1-219ENST00000523540 HERVK_113P62684 666 aa6.55□□□□□ -1.36
PCM1-219ENST00000523540 SPATS1Q496A3 300 aa6.55□□□□□ -1.36
PCM1-219ENST00000523540 PRR31Q5SQ13 230 aa6.55□□□□□ -1.36
PCM1-219ENST00000523540 CC2D1AQ6P1N0 951 aaPredicted RBP6.55□□□□□ -1.36
PCM1-219ENST00000523540 CHTF18Q8WVB6 975 aa6.55□□□□□ -1.36
PCM1-219ENST00000523540 FAM126AQ9BYI3 521 aaPredicted RBP6.55□□□□□ -1.36
PCM1-219ENST00000523540 THG1LQ9NWX6 298 aaKnown RBP6.55□□□□□ -1.36
PCM1-219ENST00000523540 H2AFY2Q9P0M6 372 aaPredicted RBP6.55□□□□□ -1.36
PCM1-219ENST00000523540 NTMQ9P121 344 aa6.55□□□□□ -1.36
PCM1-219ENST00000523540 ANKRD62A6NC57 917 aa6.54□□□□□ -1.36
PCM1-219ENST00000523540 PRAMEF25A6NGN4 478 aa6.54□□□□□ -1.36
PCM1-219ENST00000523540 FFAR3O14843 346 aa6.54□□□□□ -1.36
PCM1-219ENST00000523540 EYA4O95677 639 aa6.54□□□□□ -1.36
PCM1-219ENST00000523540 ENO2P09104 434 aaPredicted RBP6.54□□□□□ -1.36
PCM1-219ENST00000523540 RPL13P26373 211 aaKnown RBP6.54□□□□□ -1.36
PCM1-219ENST00000523540 ADCYAP1R1P41586 468 aa6.54□□□□□ -1.36
PCM1-219ENST00000523540 KIF11P52732 1056 aa6.54□□□□□ -1.36
PCM1-219ENST00000523540 ADAM9Q13443 819 aa6.54□□□□□ -1.36
PCM1-219ENST00000523540 TMEM132BQ14DG7 1078 aa6.54□□□□□ -1.36
PCM1-219ENST00000523540 CATSPEREQ5SY80 951 aa6.54□□□□□ -1.36
PCM1-219ENST00000523540 TTLL7Q6ZT98 887 aa6.54□□□□□ -1.36
PCM1-219ENST00000523540 STK32CQ86UX6 486 aa6.54□□□□□ -1.36
PCM1-219ENST00000523540 ZDHHC14Q8IZN3 488 aa6.54□□□□□ -1.36
PCM1-219ENST00000523540 KIAA1958Q8N8K9 716 aa6.54□□□□□ -1.36
PCM1-219ENST00000523540 SYT8Q8NBV8 401 aa6.54□□□□□ -1.36
PCM1-219ENST00000523540 DLL4Q9NR61 685 aa6.54□□□□□ -1.36
PCM1-219ENST00000523540 BTBD7Q9P203 1132 aa6.54□□□□□ -1.36
PCM1-219ENST00000523540 SPO11Q9Y5K1 396 aa6.54□□□□□ -1.36
PCM1-219ENST00000523540 ZNF839A8K0R7 811 aa6.53□□□□□ -1.36
PCM1-219ENST00000523540 FOXP2O15409 715 aa6.53□□□□□ -1.36
PCM1-219ENST00000523540 MMEP08473 750 aa6.53□□□□□ -1.36
PCM1-219ENST00000523540 SLC9A1P19634 815 aa6.53□□□□□ -1.36
PCM1-219ENST00000523540 AOAHP28039 575 aa6.53□□□□□ -1.36
PCM1-219ENST00000523540 CNGA1P29973 690 aa6.53□□□□□ -1.36
PCM1-219ENST00000523540 LSSP48449 732 aa6.53□□□□□ -1.36
PCM1-219ENST00000523540 PFKPQ01813 784 aa6.53□□□□□ -1.36
PCM1-219ENST00000523540 STRN3Q13033 797 aa6.53□□□□□ -1.36
PCM1-219ENST00000523540 SART3Q15020 963 aaKnown RBP6.53□□□□□ -1.36
PCM1-219ENST00000523540 VMACQ2NL98 169 aa6.53□□□□□ -1.36
PCM1-219ENST00000523540 ZXDCQ2QGD7 858 aaPredicted RBP6.53□□□□□ -1.36
PCM1-219ENST00000523540 FAM26FQ5R3K3 315 aa6.53□□□□□ -1.36
PCM1-219ENST00000523540 VASNQ6EMK4 673 aa6.53□□□□□ -1.36
PCM1-219ENST00000523540 TMC5Q6UXY8 1006 aa6.53□□□□□ -1.36
PCM1-219ENST00000523540 EFHBQ8N7U6 833 aa6.53□□□□□ -1.36
PCM1-219ENST00000523540 DTX3Q8N9I9 347 aa6.53□□□□□ -1.36
PCM1-219ENST00000523540 ASB15Q8WXK1 588 aa6.53□□□□□ -1.36
PCM1-219ENST00000523540 GPR101Q96P66 508 aaPredicted RBP6.53□□□□□ -1.36
PCM1-219ENST00000523540 ELF4Q99607 663 aaPredicted RBP6.53□□□□□ -1.36
PCM1-219ENST00000523540 ADAM7Q9H2U9 754 aa6.53□□□□□ -1.36
PCM1-219ENST00000523540 SLC39A2Q9NP94 309 aa6.53□□□□□ -1.36
PCM1-219ENST00000523540 ACSS2Q9NR19 701 aa6.53□□□□□ -1.36
PCM1-219ENST00000523540 SPTLC3Q9NUV7 552 aa6.53□□□□□ -1.36
PCM1-219ENST00000523540 C9orf118A6NHY6 69 aa6.52□□□□□ -1.37
PCM1-219ENST00000523540 NEMP1O14524 444 aa6.52□□□□□ -1.37
PCM1-219ENST00000523540 TGM5O43548 720 aa6.52□□□□□ -1.37
PCM1-219ENST00000523540 FKBP9O95302 570 aa6.52□□□□□ -1.37
PCM1-219ENST00000523540 PTX3P26022 381 aaPredicted RBP6.52□□□□□ -1.37
PCM1-219ENST00000523540 KPNA1P52294 538 aaPredicted RBP6.52□□□□□ -1.37
PCM1-219ENST00000523540 IL2P60568 153 aa6.52□□□□□ -1.37
PCM1-219ENST00000523540 AMPD3Q01432 767 aa6.52□□□□□ -1.37
PCM1-219ENST00000523540 RTP5Q14D33 572 aa6.52□□□□□ -1.37
PCM1-219ENST00000523540 ZNF174Q15697 407 aa6.52□□□□□ -1.37
PCM1-219ENST00000523540 CT47A1Q5JQC4 288 aaPredicted RBP6.52□□□□□ -1.37
PCM1-219ENST00000523540 FKBP9P1Q75LS8 142 aa6.52□□□□□ -1.37
PCM1-219ENST00000523540 FRMD5Q7Z6J6 570 aa6.52□□□□□ -1.37
PCM1-219ENST00000523540 TP53I13Q8NBR0 393 aaPredicted RBP6.52□□□□□ -1.37
PCM1-219ENST00000523540 USP7Q93009 1102 aa6.52□□□□□ -1.37
PCM1-219ENST00000523540 ZBTB8AQ96BR9 441 aa6.52□□□□□ -1.37
PCM1-219ENST00000523540 CLIC6Q96NY7 704 aa6.52□□□□□ -1.37
PCM1-219ENST00000523540 SPATA6Q9NWH7 488 aaPredicted RBP6.52□□□□□ -1.37
PCM1-219ENST00000523540 ZEB2O60315 1214 aa6.51□□□□□ -1.37
PCM1-219ENST00000523540 MAFO75444 373 aaPredicted RBP6.51□□□□□ -1.37
PCM1-219ENST00000523540 MPIG6BO95866 241 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms