RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 PRAMEF25A6NGN4 478 aa6.82□□□□□ -1.32
SKP1-211ENST00000523359 PPM1GO15355 546 aaPredicted RBP6.82□□□□□ -1.32
SKP1-211ENST00000523359 ZEB2O60315 1214 aa6.82□□□□□ -1.32
SKP1-211ENST00000523359 BRINP1O60477 761 aa6.82□□□□□ -1.32
SKP1-211ENST00000523359 LRG1P02750 347 aa6.82□□□□□ -1.32
SKP1-211ENST00000523359 C4BPAP04003 597 aaKnown RBP6.82□□□□□ -1.32
SKP1-211ENST00000523359 ASGR2P07307 311 aa6.82□□□□□ -1.32
SKP1-211ENST00000523359 FAHP16930 419 aa6.82□□□□□ -1.32
SKP1-211ENST00000523359 FBLN1P23142 703 aa6.82□□□□□ -1.32
SKP1-211ENST00000523359 GJA4P35212 333 aa6.82□□□□□ -1.32
SKP1-211ENST00000523359 STAT5AP42229 794 aa6.82□□□□□ -1.32
SKP1-211ENST00000523359 TMPRSS15P98073 1019 aa6.82□□□□□ -1.32
SKP1-211ENST00000523359 TMEM132BQ14DG7 1078 aa6.82□□□□□ -1.32
SKP1-211ENST00000523359 ETV3LQ6ZN32 361 aa6.82□□□□□ -1.32
SKP1-211ENST00000523359 SP8Q8IXZ3 490 aa6.82□□□□□ -1.32
SKP1-211ENST00000523359 RPUSD2Q8IZ73 545 aaKnown RBP6.82□□□□□ -1.32
SKP1-211ENST00000523359 FAM26EQ8N5C1 309 aa6.82□□□□□ -1.32
SKP1-211ENST00000523359 LINC01356Q8N9X3 169 aa6.82□□□□□ -1.32
SKP1-211ENST00000523359 WDR66Q8TBY9 1149 aa6.82□□□□□ -1.32
SKP1-211ENST00000523359 TOE1Q96GM8 510 aaKnown RBP6.82□□□□□ -1.32
SKP1-211ENST00000523359 PDGFDQ9GZP0 370 aaPredicted RBP6.82□□□□□ -1.32
SKP1-211ENST00000523359 PCIF1Q9H4Z3 704 aa6.82□□□□□ -1.32
SKP1-211ENST00000523359 APOBEC2Q9Y235 224 aaKnown RBP6.82□□□□□ -1.32
SKP1-211ENST00000523359 IRS2Q9Y4H2 1338 aa6.81□□□□□ -1.32
SKP1-211ENST00000523359 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.81□□□□□ -1.32
SKP1-211ENST00000523359 GPR39O43194 453 aa6.81□□□□□ -1.32
SKP1-211ENST00000523359 TGM5O43548 720 aa6.81□□□□□ -1.32
SKP1-211ENST00000523359 SYN1P17600 705 aa6.81□□□□□ -1.32
SKP1-211ENST00000523359 PFKLP17858 780 aa6.81□□□□□ -1.32
SKP1-211ENST00000523359 IGFBP6P24592 240 aaPredicted RBP6.81□□□□□ -1.32
SKP1-211ENST00000523359 MC3RP41968 323 aa6.81□□□□□ -1.32
SKP1-211ENST00000523359 OCRLQ01968 901 aa6.81□□□□□ -1.32
SKP1-211ENST00000523359 FAM50AQ14320 339 aaKnown RBP6.81□□□□□ -1.32
SKP1-211ENST00000523359 ATP13A4Q4VNC1 1196 aa6.81□□□□□ -1.32
SKP1-211ENST00000523359 TEPPQ6URK8 271 aa6.81□□□□□ -1.32
SKP1-211ENST00000523359 EFHBQ8N7U6 833 aa6.81□□□□□ -1.32
SKP1-211ENST00000523359 ELF4Q99607 663 aaPredicted RBP6.81□□□□□ -1.32
SKP1-211ENST00000523359 EMC7Q9NPA0 242 aa6.81□□□□□ -1.32
SKP1-211ENST00000523359 SPO11Q9Y5K1 396 aa6.81□□□□□ -1.32
SKP1-211ENST00000523359 NCAM1P13591 858 aa6.8□□□□□ -1.32
SKP1-211ENST00000523359 CR1LQ2VPA4 569 aa6.8□□□□□ -1.32
SKP1-211ENST00000523359 CC2D1AQ6P1N0 951 aaPredicted RBP6.8□□□□□ -1.32
SKP1-211ENST00000523359 CD300LDQ6UXZ3 194 aa6.8□□□□□ -1.32
SKP1-211ENST00000523359 C11orf74Q86VG3 221 aa6.8□□□□□ -1.32
SKP1-211ENST00000523359 TP53I13Q8NBR0 393 aaPredicted RBP6.8□□□□□ -1.32
SKP1-211ENST00000523359 DDX11Q96FC9 970 aa6.8□□□□□ -1.32
SKP1-211ENST00000523359 ADAM7Q9H2U9 754 aa6.8□□□□□ -1.32
SKP1-211ENST00000523359 TOMM22Q9NS69 142 aa6.8□□□□□ -1.32
SKP1-211ENST00000523359 FFAR3O14843 346 aa6.79□□□□□ -1.32
SKP1-211ENST00000523359 FOXP2O15409 715 aa6.79□□□□□ -1.32
SKP1-211ENST00000523359 PTX3P26022 381 aaPredicted RBP6.79□□□□□ -1.32
SKP1-211ENST00000523359 SDHAP31040 664 aa6.79□□□□□ -1.32
SKP1-211ENST00000523359 CACNB2Q08289 660 aaPredicted RBP6.79□□□□□ -1.32
SKP1-211ENST00000523359 RNF219Q5W0B1 726 aaPredicted RBP6.79□□□□□ -1.32
SKP1-211ENST00000523359 SPATS2Q86XZ4 545 aaKnown RBP6.79□□□□□ -1.32
SKP1-211ENST00000523359 PASD1Q8IV76 773 aa6.79□□□□□ -1.32
SKP1-211ENST00000523359 CXorf38Q8TB03 319 aa6.79□□□□□ -1.32
SKP1-211ENST00000523359 SYT3Q9BQG1 590 aa6.79□□□□□ -1.32
SKP1-211ENST00000523359 LUC7LQ9NQ29 371 aaKnown RBP6.79□□□□□ -1.32
SKP1-211ENST00000523359 ACSS2Q9NR19 701 aa6.79□□□□□ -1.32
SKP1-211ENST00000523359 RBPJLQ9UBG7 517 aa6.79□□□□□ -1.32
SKP1-211ENST00000523359 PHLDB1Q86UU1 1377 aa6.79□□□□□ -1.32
SKP1-211ENST00000523359 RASSF10A6NK89 507 aa6.78□□□□□ -1.32
SKP1-211ENST00000523359 C8BP07358 591 aa6.78□□□□□ -1.32
SKP1-211ENST00000523359 MMEP08473 750 aa6.78□□□□□ -1.32
SKP1-211ENST00000523359 ATF2P15336 505 aa6.78□□□□□ -1.32
SKP1-211ENST00000523359 NKX3-2P78367 333 aa6.78□□□□□ -1.32
SKP1-211ENST00000523359 TARBP2Q15633 366 aaKnown RBP6.78□□□□□ -1.32
SKP1-211ENST00000523359 CATSPEREQ5SY80 951 aa6.78□□□□□ -1.32
SKP1-211ENST00000523359 HDGFL2Q7Z4V5 671 aaPredicted RBP6.78□□□□□ -1.32
SKP1-211ENST00000523359 ZC3H18Q86VM9 953 aaKnown RBP6.78□□□□□ -1.32
SKP1-211ENST00000523359 SMARCC2Q8TAQ2 1214 aa6.78□□□□□ -1.32
SKP1-211ENST00000523359 CPA5Q8WXQ8 436 aa6.78□□□□□ -1.32
SKP1-211ENST00000523359 RNF38Q9H0F5 515 aa6.78□□□□□ -1.32
SKP1-211ENST00000523359 HOMER2Q9NSB8 354 aa6.78□□□□□ -1.32
SKP1-211ENST00000523359 PLA2G1BP04054 148 aaKnown RBP6.77□□□□□ -1.33
SKP1-211ENST00000523359 CYP17A1P05093 508 aa6.77□□□□□ -1.33
SKP1-211ENST00000523359 GUCY2FP51841 1108 aa6.77□□□□□ -1.33
SKP1-211ENST00000523359 HERVK_113P62684 666 aa6.77□□□□□ -1.33
SKP1-211ENST00000523359 FOXO4P98177 505 aa6.77□□□□□ -1.33
SKP1-211ENST00000523359 DBPQ10586 325 aaPredicted RBP6.77□□□□□ -1.33
SKP1-211ENST00000523359 DDB1Q16531 1140 aa6.77□□□□□ -1.33
SKP1-211ENST00000523359 CD276Q5ZPR3 534 aa6.77□□□□□ -1.33
SKP1-211ENST00000523359 TMC5Q6UXY8 1006 aa6.77□□□□□ -1.33
SKP1-211ENST00000523359 PROSER1Q86XN7 944 aa6.77□□□□□ -1.33
SKP1-211ENST00000523359 ADGRG2Q8IZP9 1017 aa6.77□□□□□ -1.33
SKP1-211ENST00000523359 COG1Q8WTW3 980 aa6.77□□□□□ -1.33
SKP1-211ENST00000523359 ASB15Q8WXK1 588 aa6.77□□□□□ -1.33
SKP1-211ENST00000523359 ERCC4Q92889 916 aaPredicted RBP6.77□□□□□ -1.33
SKP1-211ENST00000523359 SLC5A5Q92911 643 aa6.77□□□□□ -1.33
SKP1-211ENST00000523359 GBP4Q96PP9 640 aa6.77□□□□□ -1.33
SKP1-211ENST00000523359 NGRNQ9NPE2 291 aaKnown RBP6.77□□□□□ -1.33
SKP1-211ENST00000523359 FAN1Q9Y2M0 1017 aa6.77□□□□□ -1.33
SKP1-211ENST00000523359 ALG1L2C9J202 215 aa6.76□□□□□ -1.33
SKP1-211ENST00000523359 ULK1O75385 1050 aa6.76□□□□□ -1.33
SKP1-211ENST00000523359 AOAHP28039 575 aa6.76□□□□□ -1.33
SKP1-211ENST00000523359 MC4RP32245 332 aa6.76□□□□□ -1.33
SKP1-211ENST00000523359 FNTBP49356 437 aa6.76□□□□□ -1.33
SKP1-211ENST00000523359 SMAD3P84022 425 aaKnown RBP6.76□□□□□ -1.33
SKP1-211ENST00000523359 SMAD2Q15796 467 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms