RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 COL4A6Q14031 1691 aa14.06□□□□□ -0.16
VEGFA-223ENST00000523125 TCF20Q9UGU0 1960 aaKnown RBP14.05□□□□□ -0.16
VEGFA-223ENST00000523125 ZBTB42B2RXF5 422 aa14.05□□□□□ -0.16
VEGFA-223ENST00000523125 DEXIO95424 95 aa14.05□□□□□ -0.16
VEGFA-223ENST00000523125 NLRP5P59047 1200 aa14.05□□□□□ -0.16
VEGFA-223ENST00000523125 ERVK-21P61565 698 aa14.05□□□□□ -0.16
VEGFA-223ENST00000523125 MRPS6P82932 125 aaKnown RBP14.05□□□□□ -0.16
VEGFA-223ENST00000523125 SETQ01105 290 aaPredicted RBP14.05□□□□□ -0.16
VEGFA-223ENST00000523125 GRB10Q13322 594 aa14.05□□□□□ -0.16
VEGFA-223ENST00000523125 PRR16Q569H4 304 aa14.05□□□□□ -0.16
VEGFA-223ENST00000523125 FBXO47Q5MNV8 452 aa14.05□□□□□ -0.16
VEGFA-223ENST00000523125 SWSAP1Q6NVH7 229 aa14.05□□□□□ -0.16
VEGFA-223ENST00000523125 RSPH3Q86UC2 560 aa14.05□□□□□ -0.16
VEGFA-223ENST00000523125 SP7Q8TDD2 431 aaPredicted RBP14.05□□□□□ -0.16
VEGFA-223ENST00000523125 FAM49AQ9H0Q0 323 aaPredicted RBP14.05□□□□□ -0.16
VEGFA-223ENST00000523125 TPCN1Q9ULQ1 816 aa14.05□□□□□ -0.16
VEGFA-223ENST00000523125 PCDHA4Q9UN74 947 aa14.05□□□□□ -0.16
VEGFA-223ENST00000523125 MAFBQ9Y5Q3 323 aaPredicted RBP14.05□□□□□ -0.16
VEGFA-223ENST00000523125 MUC3AQ02505 3323 aa14.05□□□□□ -0.16
VEGFA-223ENST00000523125 KIAA1671Q9BY89 1806 aa14.04□□□□□ -0.16
VEGFA-223ENST00000523125 CPLX1O14810 134 aa14.04□□□□□ -0.16
VEGFA-223ENST00000523125 USP11P51784 963 aa14.04□□□□□ -0.16
VEGFA-223ENST00000523125 ANAPC15P60006 121 aa14.04□□□□□ -0.16
VEGFA-223ENST00000523125 SCRN1Q12765 414 aa14.04□□□□□ -0.16
VEGFA-223ENST00000523125 FAM160B1Q5W0V3 765 aa14.04□□□□□ -0.16
VEGFA-223ENST00000523125 ZNF746Q6NUN9 644 aaPredicted RBP14.04□□□□□ -0.16
VEGFA-223ENST00000523125 MIS18BP1Q6P0N0 1132 aa14.04□□□□□ -0.16
VEGFA-223ENST00000523125 PDXDC2PQ6P474 469 aa14.04□□□□□ -0.16
VEGFA-223ENST00000523125 MTHFD1LQ6UB35 978 aa14.04□□□□□ -0.16
VEGFA-223ENST00000523125 ATP8B4Q8TF62 1192 aa14.04□□□□□ -0.16
VEGFA-223ENST00000523125 TNPO1Q92973 898 aaKnown RBP14.04□□□□□ -0.16
VEGFA-223ENST00000523125 IL17RAQ96F46 866 aa14.04□□□□□ -0.16
VEGFA-223ENST00000523125 TGS1Q96RS0 853 aaKnown RBP14.04□□□□□ -0.16
VEGFA-223ENST00000523125 AGO3Q9H9G7 860 aaKnown RBP14.04□□□□□ -0.16
VEGFA-223ENST00000523125 SUGCTQ9HAC7 445 aa14.04□□□□□ -0.16
VEGFA-223ENST00000523125 ZNF302Q9NR11 478 aa14.04□□□□□ -0.16
VEGFA-223ENST00000523125 SMIM35A0A1B0GVV1 85 aa14.03□□□□□ -0.16
VEGFA-223ENST00000523125 ENPP3O14638 875 aa14.03□□□□□ -0.16
VEGFA-223ENST00000523125 BACH1O14867 736 aa14.03□□□□□ -0.16
VEGFA-223ENST00000523125 MSH4O15457 936 aa14.03□□□□□ -0.16
VEGFA-223ENST00000523125 HBP1O60381 514 aa14.03□□□□□ -0.16
VEGFA-223ENST00000523125 PFKFB2O60825 505 aa14.03□□□□□ -0.16
VEGFA-223ENST00000523125 DTNBO60941 627 aa14.03□□□□□ -0.16
VEGFA-223ENST00000523125 UPP2O95045 317 aa14.03□□□□□ -0.16
VEGFA-223ENST00000523125 RPLP2P05387 115 aaKnown RBP14.03□□□□□ -0.16
VEGFA-223ENST00000523125 KLRC1P26715 233 aa14.03□□□□□ -0.16
VEGFA-223ENST00000523125 TMEM62Q0P6H9 643 aa14.03□□□□□ -0.16
VEGFA-223ENST00000523125 IER5Q5VY09 327 aa14.03□□□□□ -0.16
VEGFA-223ENST00000523125 TSHZ1Q6ZSZ6 1077 aa14.03□□□□□ -0.16
VEGFA-223ENST00000523125 BLIDQ8IZY5 108 aa14.03□□□□□ -0.16
VEGFA-223ENST00000523125 MICALL1Q8N3F8 863 aa14.03□□□□□ -0.16
VEGFA-223ENST00000523125 DAGLBQ8NCG7 672 aa14.03□□□□□ -0.16
VEGFA-223ENST00000523125 TBCKQ8TEA7 893 aa14.03□□□□□ -0.16
VEGFA-223ENST00000523125 ATXN2LQ8WWM7 1075 aaKnown RBP14.03□□□□□ -0.16
VEGFA-223ENST00000523125 SLC5A5Q92911 643 aa14.03□□□□□ -0.16
VEGFA-223ENST00000523125 C17orf80Q9BSJ5 609 aa14.03□□□□□ -0.16
VEGFA-223ENST00000523125 THEGQ9P2T0 379 aa14.03□□□□□ -0.16
VEGFA-223ENST00000523125 MTUS1Q9ULD2 1270 aa14.03□□□□□ -0.16
VEGFA-223ENST00000523125 SQORQ9Y6N5 450 aa14.03□□□□□ -0.16
VEGFA-223ENST00000523125 COL1A2P08123 1366 aa14.02□□□□□ -0.17
VEGFA-223ENST00000523125 IGSF9BQ9UPX0 1349 aa14.02□□□□□ -0.17
VEGFA-223ENST00000523125 KDM3AQ9Y4C1 1321 aa14.02□□□□□ -0.17
VEGFA-223ENST00000523125 CYP3A7-CYP3A51PA0A087WV96 503 aa14.02□□□□□ -0.17
VEGFA-223ENST00000523125 GTPBP6O43824 516 aaPredicted RBP14.02□□□□□ -0.17
VEGFA-223ENST00000523125 CTDNEP1O95476 244 aa14.02□□□□□ -0.17
VEGFA-223ENST00000523125 CYP3A7P24462 503 aa14.02□□□□□ -0.17
VEGFA-223ENST00000523125 AK2P54819 239 aa14.02□□□□□ -0.17
VEGFA-223ENST00000523125 KRT76Q01546 638 aa14.02□□□□□ -0.17
VEGFA-223ENST00000523125 ZNF484Q5JVG2 852 aa14.02□□□□□ -0.17
VEGFA-223ENST00000523125 RTN4RL1Q86UN2 441 aaPredicted RBP14.02□□□□□ -0.17
VEGFA-223ENST00000523125 SMAP1Q8IYB5 467 aaPredicted RBP14.02□□□□□ -0.17
VEGFA-223ENST00000523125 KIAA0319LQ8IZA0 1049 aa14.02□□□□□ -0.17
VEGFA-223ENST00000523125 FAM177A1Q8N128 213 aaPredicted RBP14.02□□□□□ -0.17
VEGFA-223ENST00000523125 NME8Q8N427 588 aa14.02□□□□□ -0.17
VEGFA-223ENST00000523125 GDPD5Q8WTR4 605 aa14.02□□□□□ -0.17
VEGFA-223ENST00000523125 LINC01599Q8WXQ3 324 aa14.02□□□□□ -0.17
VEGFA-223ENST00000523125 GJA10Q969M2 543 aa14.02□□□□□ -0.17
VEGFA-223ENST00000523125 CELF4Q9BZC1 486 aaKnown RBP14.02□□□□□ -0.17
VEGFA-223ENST00000523125 PCDHA10Q9Y5I2 948 aa14.02□□□□□ -0.17
VEGFA-223ENST00000523125 TRPV2Q9Y5S1 764 aa14.02□□□□□ -0.17
VEGFA-223ENST00000523125 BRWD1Q9NSI6 2320 aa14.02□□□□□ -0.17
VEGFA-223ENST00000523125 FNDC1Q4ZHG4 1894 aaPredicted RBP14.01□□□□□ -0.17
VEGFA-223ENST00000523125 TTC28Q96AY4 2481 aa14.01□□□□□ -0.17
VEGFA-223ENST00000523125 SEC24BO95487 1268 aa14.01□□□□□ -0.17
VEGFA-223ENST00000523125 PSAPP07602 524 aa14.01□□□□□ -0.17
VEGFA-223ENST00000523125 CD52P31358 61 aa14.01□□□□□ -0.17
VEGFA-223ENST00000523125 Q4G0T1 1027 aa14.01□□□□□ -0.17
VEGFA-223ENST00000523125 TJAP1Q5JTD0 557 aa14.01□□□□□ -0.17
VEGFA-223ENST00000523125 GALNT17Q6IS24 598 aa14.01□□□□□ -0.17
VEGFA-223ENST00000523125 CPLX2Q6PUV4 134 aaKnown RBP14.01□□□□□ -0.17
VEGFA-223ENST00000523125 CRIPAKQ8N1N5 446 aa14.01□□□□□ -0.17
VEGFA-223ENST00000523125 BBXQ8WY36 941 aaPredicted RBP14.01□□□□□ -0.17
VEGFA-223ENST00000523125 MBOAT7Q96N66 472 aa14.01□□□□□ -0.17
VEGFA-223ENST00000523125 ASB2Q96Q27 587 aa14.01□□□□□ -0.17
VEGFA-223ENST00000523125 YME1L1Q96TA2 773 aa14.01□□□□□ -0.17
VEGFA-223ENST00000523125 RIT2Q99578 217 aa14.01□□□□□ -0.17
VEGFA-223ENST00000523125 PHF20Q9BVI0 1012 aa14.01□□□□□ -0.17
VEGFA-223ENST00000523125 SLKQ9H2G2 1235 aaPredicted RBP14.01□□□□□ -0.17
VEGFA-223ENST00000523125 CDHR5Q9HBB8 845 aa14.01□□□□□ -0.17
VEGFA-223ENST00000523125 GJB4Q9NTQ9 266 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms