RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 KAT6AQ92794 2004 aa13.38□□□□□ -0.27
PVT1-215ENST00000522963 TRIP12Q14669 1992 aaPredicted RBP13.38□□□□□ -0.27
PVT1-215ENST00000522963 B4GALT4O60513 344 aa13.37□□□□□ -0.27
PVT1-215ENST00000522963 MED24O75448 989 aa13.37□□□□□ -0.27
PVT1-215ENST00000522963 LGALS2P05162 132 aa13.37□□□□□ -0.27
PVT1-215ENST00000522963 PSAPP07602 524 aa13.37□□□□□ -0.27
PVT1-215ENST00000522963 CMA1P23946 247 aa13.37□□□□□ -0.27
PVT1-215ENST00000522963 KRT79Q5XKE5 535 aa13.37□□□□□ -0.27
PVT1-215ENST00000522963 MIS18BP1Q6P0N0 1132 aa13.37□□□□□ -0.27
PVT1-215ENST00000522963 CABP7Q86V35 215 aa13.37□□□□□ -0.27
PVT1-215ENST00000522963 TRIM50Q86XT4 487 aa13.37□□□□□ -0.27
PVT1-215ENST00000522963 C7orf31Q8N865 590 aa13.37□□□□□ -0.27
PVT1-215ENST00000522963 SLC43A3Q8NBI5 491 aa13.37□□□□□ -0.27
PVT1-215ENST00000522963 SNX29Q8TEQ0 813 aa13.37□□□□□ -0.27
PVT1-215ENST00000522963 DYDC2Q96IM9 177 aa13.37□□□□□ -0.27
PVT1-215ENST00000522963 PCYT2Q99447 389 aa13.37□□□□□ -0.27
PVT1-215ENST00000522963 HSD17B14Q9BPX1 270 aa13.37□□□□□ -0.27
PVT1-215ENST00000522963 KATNAL1Q9BW62 490 aa13.37□□□□□ -0.27
PVT1-215ENST00000522963 UBE2OQ9C0C9 1292 aaKnown RBP13.37□□□□□ -0.27
PVT1-215ENST00000522963 CCSER1Q9C0I3 900 aa13.37□□□□□ -0.27
PVT1-215ENST00000522963 GOLPH3LQ9H4A5 285 aa13.37□□□□□ -0.27
PVT1-215ENST00000522963 TRIOBPQ9H2D6 2365 aa13.36□□□□□ -0.27
PVT1-215ENST00000522963 IGKV6D-21A0A0A0MT36 114 aa13.36□□□□□ -0.27
PVT1-215ENST00000522963 GOLGA6L4A6NEF3 574 aa13.36□□□□□ -0.27
PVT1-215ENST00000522963 GOLGA6L22H0YM25 854 aa13.36□□□□□ -0.27
PVT1-215ENST00000522963 SLITRK3O94933 977 aa13.36□□□□□ -0.27
PVT1-215ENST00000522963 SPATA31C1P0DKV0 1188 aa13.36□□□□□ -0.27
PVT1-215ENST00000522963 CYP2C9P11712 490 aa13.36□□□□□ -0.27
PVT1-215ENST00000522963 HOXD8P13378 290 aaPredicted RBP13.36□□□□□ -0.27
PVT1-215ENST00000522963 ITGB8P26012 769 aa13.36□□□□□ -0.27
PVT1-215ENST00000522963 TCF7P36402 384 aaPredicted RBP13.36□□□□□ -0.27
PVT1-215ENST00000522963 CCT6AP40227 531 aaKnown RBP13.36□□□□□ -0.27
PVT1-215ENST00000522963 UBA7P41226 1012 aa13.36□□□□□ -0.27
PVT1-215ENST00000522963 UBE2HP62256 183 aa13.36□□□□□ -0.27
PVT1-215ENST00000522963 CYP4A11Q02928 519 aa13.36□□□□□ -0.27
PVT1-215ENST00000522963 CTTNQ14247 550 aaKnown RBP13.36□□□□□ -0.27
PVT1-215ENST00000522963 ECM1Q16610 540 aa13.36□□□□□ -0.27
PVT1-215ENST00000522963 UGCGQ16739 394 aa13.36□□□□□ -0.27
PVT1-215ENST00000522963 SWSAP1Q6NVH7 229 aa13.36□□□□□ -0.27
PVT1-215ENST00000522963 NFRKBQ6P4R8 1299 aa13.36□□□□□ -0.27
PVT1-215ENST00000522963 CATSPER3Q86XQ3 398 aa13.36□□□□□ -0.27
PVT1-215ENST00000522963 CCDC60Q8IWA6 550 aaPredicted RBP13.36□□□□□ -0.27
PVT1-215ENST00000522963 FSIP1Q8NA03 581 aa13.36□□□□□ -0.27
PVT1-215ENST00000522963 BANK1Q8NDB2 785 aa13.36□□□□□ -0.27
PVT1-215ENST00000522963 ERMNQ8TAM6 284 aa13.36□□□□□ -0.27
PVT1-215ENST00000522963 MRPS27Q92552 414 aaKnown RBP13.36□□□□□ -0.27
PVT1-215ENST00000522963 GLG1Q92896 1179 aa13.36□□□□□ -0.27
PVT1-215ENST00000522963 POLR3CQ9BUI4 534 aaPredicted RBP13.36□□□□□ -0.27
PVT1-215ENST00000522963 SEZ6LQ9BYH1 1024 aa13.36□□□□□ -0.27
PVT1-215ENST00000522963 WRAP73Q9P2S5 460 aaPredicted RBP13.36□□□□□ -0.27
PVT1-215ENST00000522963 HDAC6Q9UBN7 1215 aa13.36□□□□□ -0.27
PVT1-215ENST00000522963 GABBR1Q9UBS5 961 aa13.36□□□□□ -0.27
PVT1-215ENST00000522963 STK24Q9Y6E0 443 aa13.36□□□□□ -0.27
PVT1-215ENST00000522963 A0A087X0B3 334 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 FAM237AA0A1B0GTK4 181 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 A0A1B0GVL5 298 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 POTEB3A0JP26 581 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 H3BRB1 525 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 BACH1O14867 736 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 KIAA0355O15063 1070 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 LGR5O75473 907 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 SLC34A2O95436 690 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 F2P00734 622 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 CD4P01730 458 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 P4HBP07237 508 aaKnown RBP13.35□□□□□ -0.27
PVT1-215ENST00000522963 PFKFB1P16118 471 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 MARK3P27448 753 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 RPA1P27694 616 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 CYP2C18P33260 490 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 GRB10Q13322 594 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 KARSQ15046 597 aaKnown RBP13.35□□□□□ -0.27
PVT1-215ENST00000522963 ZRSR1Q15695 479 aaKnown RBP13.35□□□□□ -0.27
PVT1-215ENST00000522963 PTGISQ16647 500 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 HAUS3Q68CZ6 603 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 POTEBQ6S5H4 581 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 TPH2Q8IWU9 490 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 NEK9Q8TD19 979 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 PNMA5Q96PV4 448 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 PLIN2Q99541 437 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 C16orf70Q9BSU1 422 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 PANK2Q9BZ23 570 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 HIPK3Q9H422 1215 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 TUT1Q9H6E5 874 aaKnown RBP13.35□□□□□ -0.27
PVT1-215ENST00000522963 TUFT1Q9NNX1 390 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 FAM13BQ9NYF5 915 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 TBX21Q9UL17 535 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 ZNF215Q9UL58 517 aaPredicted RBP13.35□□□□□ -0.27
PVT1-215ENST00000522963 HPSEQ9Y251 543 aa13.35□□□□□ -0.27
PVT1-215ENST00000522963 LTBP2Q14767 1821 aa13.34□□□□□ -0.27
PVT1-215ENST00000522963 SLC26A4O43511 780 aa13.34□□□□□ -0.27
PVT1-215ENST00000522963 ZNF862O60290 1169 aa13.34□□□□□ -0.27
PVT1-215ENST00000522963 TIMP1P01033 207 aa13.34□□□□□ -0.27
PVT1-215ENST00000522963 TXLNAP40222 546 aa13.34□□□□□ -0.27
PVT1-215ENST00000522963 QARSP47897 775 aaKnown RBP13.34□□□□□ -0.27
PVT1-215ENST00000522963 NDUFA8P51970 172 aa13.34□□□□□ -0.27
PVT1-215ENST00000522963 CCL23P55773 120 aa13.34□□□□□ -0.27
PVT1-215ENST00000522963 PSMC5P62195 406 aa13.34□□□□□ -0.27
PVT1-215ENST00000522963 ZNF200P98182 395 aaPredicted RBP13.34□□□□□ -0.27
PVT1-215ENST00000522963 TMEM119Q4V9L6 283 aa13.34□□□□□ -0.27
PVT1-215ENST00000522963 HYIQ5T013 277 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms