RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 PCDH1Q08174 1060 aa8.21□□□□□ -1.1
SDCBP-210ENST00000522843 PDE4CQ08493 712 aa8.21□□□□□ -1.1
SDCBP-210ENST00000522843 ZNF423Q2M1K9 1284 aa8.21□□□□□ -1.1
SDCBP-210ENST00000522843 FAM47AQ5JRC9 791 aa8.21□□□□□ -1.1
SDCBP-210ENST00000522843 PRAMEF19Q5SWL8 479 aa8.21□□□□□ -1.1
SDCBP-210ENST00000522843 SLC4A10Q6U841 1118 aa8.21□□□□□ -1.1
SDCBP-210ENST00000522843 GJD3Q8N144 294 aa8.21□□□□□ -1.1
SDCBP-210ENST00000522843 RETREG2Q8NC44 543 aa8.21□□□□□ -1.1
SDCBP-210ENST00000522843 ARRDC4Q8NCT1 418 aa8.21□□□□□ -1.1
SDCBP-210ENST00000522843 MISP3Q96FF7 219 aa8.21□□□□□ -1.1
SDCBP-210ENST00000522843 CLEC4MQ9H2X3 399 aaPredicted RBP8.21□□□□□ -1.1
SDCBP-210ENST00000522843 GSX1Q9H4S2 264 aaPredicted RBP8.21□□□□□ -1.1
SDCBP-210ENST00000522843 AS3MTQ9HBK9 375 aa8.21□□□□□ -1.1
SDCBP-210ENST00000522843 BTBD7Q9P203 1132 aa8.21□□□□□ -1.1
SDCBP-210ENST00000522843 TACC3Q9Y6A5 838 aa8.21□□□□□ -1.1
SDCBP-210ENST00000522843 SMCHD1A6NHR9 2005 aa8.2□□□□□ -1.1
SDCBP-210ENST00000522843 GBF1Q92538 1859 aa8.2□□□□□ -1.1
SDCBP-210ENST00000522843 PRRC2BQ5JSZ5 2229 aaKnown RBP8.2□□□□□ -1.1
SDCBP-210ENST00000522843 A0A096LPE4 126 aa8.2□□□□□ -1.1
SDCBP-210ENST00000522843 A0A1W2PPZ6 126 aa8.2□□□□□ -1.1
SDCBP-210ENST00000522843 C19orf81C9J6K1 198 aa8.2□□□□□ -1.1
SDCBP-210ENST00000522843 SEPT4O43236 478 aa8.2□□□□□ -1.1
SDCBP-210ENST00000522843 RAG1P15918 1043 aa8.2□□□□□ -1.1
SDCBP-210ENST00000522843 MECOMQ03112 1051 aa8.2□□□□□ -1.1
SDCBP-210ENST00000522843 EXOSC9Q06265 439 aaKnown RBP8.2□□□□□ -1.1
SDCBP-210ENST00000522843 FAAP100Q0VG06 881 aa8.2□□□□□ -1.1
SDCBP-210ENST00000522843 DDX10Q13206 875 aaKnown RBP8.2□□□□□ -1.1
SDCBP-210ENST00000522843 RASGRF1Q13972 1273 aa8.2□□□□□ -1.1
SDCBP-210ENST00000522843 CCDC27Q2M243 656 aa8.2□□□□□ -1.1
SDCBP-210ENST00000522843 TMEM31Q5JXX7 168 aa8.2□□□□□ -1.1
SDCBP-210ENST00000522843 TMEM240Q5SV17 173 aa8.2□□□□□ -1.1
SDCBP-210ENST00000522843 ATG4DQ86TL0 474 aaPredicted RBP8.2□□□□□ -1.1
SDCBP-210ENST00000522843 TMOD4Q9NZQ9 345 aa8.2□□□□□ -1.1
SDCBP-210ENST00000522843 EGFL7Q9UHF1 273 aa8.2□□□□□ -1.1
SDCBP-210ENST00000522843 DENND2AQ9ULE3 1009 aa8.2□□□□□ -1.1
SDCBP-210ENST00000522843 AP4E1Q9UPM8 1137 aa8.2□□□□□ -1.1
SDCBP-210ENST00000522843 YBX2Q9Y2T7 364 aaKnown RBP8.2□□□□□ -1.1
SDCBP-210ENST00000522843 RABGAP1Q9Y3P9 1069 aa8.2□□□□□ -1.1
SDCBP-210ENST00000522843 WDFY4Q6ZS81 3184 aa8.2□□□□□ -1.1
SDCBP-210ENST00000522843 TRANK1O15050 2925 aa8.19□□□□□ -1.1
SDCBP-210ENST00000522843 H3BRB1 525 aa8.19□□□□□ -1.1
SDCBP-210ENST00000522843 DYNC1LI2O43237 492 aaPredicted RBP8.19□□□□□ -1.1
SDCBP-210ENST00000522843 PQBP1O60828 265 aaKnown RBP8.19□□□□□ -1.1
SDCBP-210ENST00000522843 ATP2B3Q16720 1220 aa8.19□□□□□ -1.1
SDCBP-210ENST00000522843 CYP27C1Q4G0S4 372 aa8.19□□□□□ -1.1
SDCBP-210ENST00000522843 OLFML2BQ68BL8 750 aa8.19□□□□□ -1.1
SDCBP-210ENST00000522843 DZIP1Q86YF9 867 aaKnown RBP8.19□□□□□ -1.1
SDCBP-210ENST00000522843 CCAR1Q8IX12 1150 aaKnown RBP8.19□□□□□ -1.1
SDCBP-210ENST00000522843 NKX2-4Q9H2Z4 354 aa8.19□□□□□ -1.1
SDCBP-210ENST00000522843 TUT1Q9H6E5 874 aaKnown RBP8.19□□□□□ -1.1
SDCBP-210ENST00000522843 ABCF2Q9UG63 623 aa8.19□□□□□ -1.1
SDCBP-210ENST00000522843 ZBTB21Q9ULJ3 1066 aa8.19□□□□□ -1.1
SDCBP-210ENST00000522843 IL16Q14005 1332 aa8.19□□□□□ -1.1
SDCBP-210ENST00000522843 ZNF236Q9UL36 1845 aa8.19□□□□□ -1.1
SDCBP-210ENST00000522843 POLR3DP05423 398 aaPredicted RBP8.18□□□□□ -1.1
SDCBP-210ENST00000522843 ASNSP08243 561 aa8.18□□□□□ -1.1
SDCBP-210ENST00000522843 MRE11P49959 708 aa8.18□□□□□ -1.1
SDCBP-210ENST00000522843 BNIP3Q12983 259 aa8.18□□□□□ -1.1
SDCBP-210ENST00000522843 PKN1Q16512 942 aa8.18□□□□□ -1.1
SDCBP-210ENST00000522843 WDR78Q5VTH9 848 aa8.18□□□□□ -1.1
SDCBP-210ENST00000522843 B4GALNT3Q6L9W6 998 aa8.18□□□□□ -1.1
SDCBP-210ENST00000522843 CATSPERGQ6ZRH7 1159 aa8.18□□□□□ -1.1
SDCBP-210ENST00000522843 METTL16Q86W50 562 aaKnown RBP8.18□□□□□ -1.1
SDCBP-210ENST00000522843 C12orf42Q96LP6 360 aa8.18□□□□□ -1.1
SDCBP-210ENST00000522843 CORO1BQ9BR76 489 aa8.18□□□□□ -1.1
SDCBP-210ENST00000522843 CD320Q9NPF0 282 aa8.18□□□□□ -1.1
SDCBP-210ENST00000522843 TMEM39AQ9NV64 488 aa8.18□□□□□ -1.1
SDCBP-210ENST00000522843 GNL3LQ9NVN8 582 aaKnown RBP8.18□□□□□ -1.1
SDCBP-210ENST00000522843 HERC5Q9UII4 1024 aaKnown RBP8.18□□□□□ -1.1
SDCBP-210ENST00000522843 TBX21Q9UL17 535 aa8.18□□□□□ -1.1
SDCBP-210ENST00000522843 LRRC37A2A6NM11 1700 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 A0A1W2PQ45 241 aaPredicted RBP8.17□□□□□ -1.1
SDCBP-210ENST00000522843 A0A1W2PQY0 241 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 ERC2O15083 957 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 GLRX3O76003 335 aaKnown RBP8.17□□□□□ -1.1
SDCBP-210ENST00000522843 PGK1P00558 417 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 TIMP1P01033 207 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 ACRP10323 421 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 FUT4P22083 530 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 ADORA2AP29274 412 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 CCNA1P78396 465 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 ARHGAP4P98171 946 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 LBX2Q6XYB7 198 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 SPOCD1Q6ZMY3 1216 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 CCDC129Q6ZRS4 1044 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 ZNF365Q70YC5 407 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 ANKRD33Q7Z3H0 272 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 CCNJLQ8IV13 435 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 GLYCTKQ8IVS8 523 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 ZGPATQ8N5A5 531 aaKnown RBP8.17□□□□□ -1.1
SDCBP-210ENST00000522843 GLIS3Q8NEA6 775 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 SH3RF3Q8TEJ3 882 aaPredicted RBP8.17□□□□□ -1.1
SDCBP-210ENST00000522843 TMEM40Q8WWA1 233 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 FAM168AQ92567 244 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 NSUN4Q96CB9 384 aaKnown RBP8.17□□□□□ -1.1
SDCBP-210ENST00000522843 USP44Q9H0E7 712 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 SIL1Q9H173 461 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 CWC22Q9HCG8 908 aaKnown RBP8.17□□□□□ -1.1
SDCBP-210ENST00000522843 PI4KBQ9UBF8 816 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 PDS5AQ29RF7 1337 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms