RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 ITGB7P26010 798 aa7.78□□□□□ -1.16
VPS13B-211ENST00000522802 ARNTP27540 789 aa7.78□□□□□ -1.16
VPS13B-211ENST00000522802 ADORA2AP29274 412 aa7.78□□□□□ -1.16
VPS13B-211ENST00000522802 NOS3P29474 1203 aa7.78□□□□□ -1.16
VPS13B-211ENST00000522802 CCNA1P78396 465 aa7.78□□□□□ -1.16
VPS13B-211ENST00000522802 EXOSC6Q5RKV6 272 aaKnown RBP7.78□□□□□ -1.16
VPS13B-211ENST00000522802 RASIP1Q5U651 963 aa7.78□□□□□ -1.16
VPS13B-211ENST00000522802 OLFML2BQ68BL8 750 aa7.78□□□□□ -1.16
VPS13B-211ENST00000522802 CCDC129Q6ZRS4 1044 aa7.78□□□□□ -1.16
VPS13B-211ENST00000522802 Q6ZS46 218 aa7.78□□□□□ -1.16
VPS13B-211ENST00000522802 ACAD11Q709F0 780 aa7.78□□□□□ -1.16
VPS13B-211ENST00000522802 C16orf59Q7L2K0 433 aa7.78□□□□□ -1.16
VPS13B-211ENST00000522802 TEX11Q8IYF3 940 aa7.78□□□□□ -1.16
VPS13B-211ENST00000522802 MRRFQ96E11 262 aaKnown RBP7.78□□□□□ -1.16
VPS13B-211ENST00000522802 NOC4LQ9BVI4 516 aaKnown RBP7.78□□□□□ -1.16
VPS13B-211ENST00000522802 USP26Q9BXU7 913 aa7.78□□□□□ -1.16
VPS13B-211ENST00000522802 TMPRSS13Q9BYE2 586 aa7.78□□□□□ -1.16
VPS13B-211ENST00000522802 USP44Q9H0E7 712 aa7.78□□□□□ -1.16
VPS13B-211ENST00000522802 PRKRIP1Q9H875 184 aaPredicted RBP7.78□□□□□ -1.16
VPS13B-211ENST00000522802 TACC3Q9Y6A5 838 aa7.78□□□□□ -1.16
VPS13B-211ENST00000522802 PRRC2BQ5JSZ5 2229 aaKnown RBP7.78□□□□□ -1.16
VPS13B-211ENST00000522802 MYH1P12882 1939 aa7.78□□□□□ -1.16
VPS13B-211ENST00000522802 COL11A1P12107 1806 aaPredicted RBP7.78□□□□□ -1.16
VPS13B-211ENST00000522802 FLT1P17948 1338 aa7.78□□□□□ -1.16
VPS13B-211ENST00000522802 CFAP54Q96N23 3096 aa7.77□□□□□ -1.16
VPS13B-211ENST00000522802 ROBO3Q96MS0 1386 aa7.77□□□□□ -1.17
VPS13B-211ENST00000522802 COBLO75128 1261 aa7.77□□□□□ -1.17
VPS13B-211ENST00000522802 CIAO1O76071 339 aa7.77□□□□□ -1.17
VPS13B-211ENST00000522802 PGK1P00558 417 aa7.77□□□□□ -1.17
VPS13B-211ENST00000522802 CCDC184Q52MB2 194 aa7.77□□□□□ -1.17
VPS13B-211ENST00000522802 TMEM31Q5JXX7 168 aa7.77□□□□□ -1.17
VPS13B-211ENST00000522802 SULF2Q8IWU5 870 aa7.77□□□□□ -1.17
VPS13B-211ENST00000522802 NSUN4Q96CB9 384 aaKnown RBP7.77□□□□□ -1.17
VPS13B-211ENST00000522802 C12orf42Q96LP6 360 aa7.77□□□□□ -1.17
VPS13B-211ENST00000522802 FEZ1Q99689 392 aa7.77□□□□□ -1.17
VPS13B-211ENST00000522802 CORO1BQ9BR76 489 aa7.77□□□□□ -1.17
VPS13B-211ENST00000522802 NKX2-4Q9H2Z4 354 aa7.77□□□□□ -1.17
VPS13B-211ENST00000522802 XPNPEP3Q9NQH7 507 aa7.77□□□□□ -1.17
VPS13B-211ENST00000522802 PI4KBQ9UBF8 816 aa7.77□□□□□ -1.17
VPS13B-211ENST00000522802 TBX21Q9UL17 535 aa7.77□□□□□ -1.17
VPS13B-211ENST00000522802 PA2G4Q9UQ80 394 aaKnown RBP7.77□□□□□ -1.17
VPS13B-211ENST00000522802 YBX2Q9Y2T7 364 aaKnown RBP7.77□□□□□ -1.17
VPS13B-211ENST00000522802 USP34Q70CQ2 3546 aa7.77□□□□□ -1.17
VPS13B-211ENST00000522802 ZNFX1Q9P2E3 1918 aaKnown RBP7.76□□□□□ -1.17
VPS13B-211ENST00000522802 CACNA1AO00555 2505 aa7.76□□□□□ -1.17
VPS13B-211ENST00000522802 GH2P01242 217 aa7.76□□□□□ -1.17
VPS13B-211ENST00000522802 GSTP1P09211 210 aaKnown RBP7.76□□□□□ -1.17
VPS13B-211ENST00000522802 ACRP10323 421 aa7.76□□□□□ -1.17
VPS13B-211ENST00000522802 CSF2RAP15509 400 aa7.76□□□□□ -1.17
VPS13B-211ENST00000522802 ZNF252P-AS1Q0IIN9 211 aa7.76□□□□□ -1.17
VPS13B-211ENST00000522802 TMEM240Q5SV17 173 aa7.76□□□□□ -1.17
VPS13B-211ENST00000522802 SPTY2D1Q68D10 685 aaPredicted RBP7.76□□□□□ -1.17
VPS13B-211ENST00000522802 LBX2Q6XYB7 198 aa7.76□□□□□ -1.17
VPS13B-211ENST00000522802 ADGRA1Q86SQ6 560 aa7.76□□□□□ -1.17
VPS13B-211ENST00000522802 DPP9Q86TI2 863 aa7.76□□□□□ -1.17
VPS13B-211ENST00000522802 MAPKAPK5Q8IW41 473 aa7.76□□□□□ -1.17
VPS13B-211ENST00000522802 AGGF1Q8N302 714 aaeCLIP7.76□□□□□ -1.17
VPS13B-211ENST00000522802 RUSC1Q9BVN2 902 aa7.76□□□□□ -1.17
VPS13B-211ENST00000522802 MOV10L1Q9BXT6 1211 aaKnown RBP7.76□□□□□ -1.17
VPS13B-211ENST00000522802 EMILIN2Q9BXX0 1053 aa7.76□□□□□ -1.17
VPS13B-211ENST00000522802 CACNA2D2Q9NY47 1150 aa7.76□□□□□ -1.17
VPS13B-211ENST00000522802 HMG20BQ9P0W2 317 aa7.76□□□□□ -1.17
VPS13B-211ENST00000522802 SAP30BPQ9UHR5 308 aaKnown RBP7.76□□□□□ -1.17
VPS13B-211ENST00000522802 PALD1Q9ULE6 856 aa7.76□□□□□ -1.17
VPS13B-211ENST00000522802 SAMM50Q9Y512 469 aa7.76□□□□□ -1.17
VPS13B-211ENST00000522802 BRWD1Q9NSI6 2320 aa7.75□□□□□ -1.17
VPS13B-211ENST00000522802 TRIOO75962 3097 aa7.75□□□□□ -1.17
VPS13B-211ENST00000522802 NAV1Q8NEY1 1877 aa7.75□□□□□ -1.17
VPS13B-211ENST00000522802 TIMP1P01033 207 aa7.75□□□□□ -1.17
VPS13B-211ENST00000522802 TAL1P17542 331 aaPredicted RBP7.75□□□□□ -1.17
VPS13B-211ENST00000522802 GATA4P43694 442 aa7.75□□□□□ -1.17
VPS13B-211ENST00000522802 TIMM10P62072 90 aa7.75□□□□□ -1.17
VPS13B-211ENST00000522802 PCNX4Q63HM2 1172 aa7.75□□□□□ -1.17
VPS13B-211ENST00000522802 CATSPERGQ6ZRH7 1159 aa7.75□□□□□ -1.17
VPS13B-211ENST00000522802 ANKRD33Q7Z3H0 272 aa7.75□□□□□ -1.17
VPS13B-211ENST00000522802 METTL16Q86W50 562 aaKnown RBP7.75□□□□□ -1.17
VPS13B-211ENST00000522802 CRACR2BQ8N4Y2 399 aaPredicted RBP7.75□□□□□ -1.17
VPS13B-211ENST00000522802 SLC44A5Q8NCS7 719 aa7.75□□□□□ -1.17
VPS13B-211ENST00000522802 ACER1Q8TDN7 264 aa7.75□□□□□ -1.17
VPS13B-211ENST00000522802 MAML3Q96JK9 1138 aa7.75□□□□□ -1.17
VPS13B-211ENST00000522802 CCDC86Q9H6F5 360 aaKnown RBP7.75□□□□□ -1.17
VPS13B-211ENST00000522802 RPAP3Q9H6T3 665 aaPredicted RBP7.75□□□□□ -1.17
VPS13B-211ENST00000522802 SUGCTQ9HAC7 445 aa7.75□□□□□ -1.17
VPS13B-211ENST00000522802 AATFQ9NY61 560 aaKnown RBP eCLIP7.75□□□□□ -1.17
VPS13B-211ENST00000522802 RAI14Q9P0K7 980 aa7.75□□□□□ -1.17
VPS13B-211ENST00000522802 CYP8B1Q9UNU6 501 aa7.75□□□□□ -1.17
VPS13B-211ENST00000522802 SYNRGQ9UMZ2 1314 aa7.75□□□□□ -1.17
VPS13B-211ENST00000522802 A0A1B0GUL7 405 aa7.74□□□□□ -1.17
VPS13B-211ENST00000522802 MYADML2A6NDP7 307 aa7.74□□□□□ -1.17
VPS13B-211ENST00000522802 ADAMTS4O75173 837 aa7.74□□□□□ -1.17
VPS13B-211ENST00000522802 MAP4K4O95819 1239 aaPredicted RBP7.74□□□□□ -1.17
VPS13B-211ENST00000522802 RECKO95980 971 aa7.74□□□□□ -1.17
VPS13B-211ENST00000522802 RARBP10826 455 aa7.74□□□□□ -1.17
VPS13B-211ENST00000522802 MYOGP15173 224 aa7.74□□□□□ -1.17
VPS13B-211ENST00000522802 MRE11P49959 708 aa7.74□□□□□ -1.17
VPS13B-211ENST00000522802 ACLYP53396 1101 aa7.74□□□□□ -1.17
VPS13B-211ENST00000522802 RABGGTBP53611 331 aa7.74□□□□□ -1.17
VPS13B-211ENST00000522802 GSTO1P78417 241 aa7.74□□□□□ -1.17
VPS13B-211ENST00000522802 RAB30Q15771 203 aa7.74□□□□□ -1.17
VPS13B-211ENST00000522802 HP1BP3Q5SSJ5 553 aaPredicted RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms