RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	PLIN2	Q99541	437 aa		11.15	□□□□□ -0.63
TCF7-223	ENST00000522653	MID2	Q9UJV3	735 aa		11.15	□□□□□ -0.63
TCF7-223	ENST00000522653	UTP11	Q9Y3A2	253 aa	Known RBP	11.15	□□□□□ -0.63
TCF7-223	ENST00000522653	UBN2	Q6ZU65	1347 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	RGL2	O15211	777 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	PSMC2	P35998	433 aa	Known RBP	11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	ELAVL2	Q12926	359 aa	Known RBP	11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	CHADL	Q6NUI6	762 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	APPL2	Q8NEU8	664 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	TMEM169	Q96HH4	297 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	CTNND2	Q9UQB3	1225 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	PCDHB4	Q9Y5E5	795 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	EFCAB14	O75071	495 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	RNF40	O75150	1001 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	ALDH1A3	P47895	512 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	FAM151A	Q8WW52	585 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	SUDS3	Q9H7L9	328 aa	Predicted RBP	11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	MRPL47	Q9HD33	250 aa	Known RBP	11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	KIAA1468	Q9P260	1216 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	MROH7-TTC4	A0A0A0MT08	1334 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	RAG1	P15918	1043 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	KLHL30	Q0D2K2	578 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	MTMR1	Q13613	665 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	NFIX	Q14938	502 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	SUSD4	Q5VX71	490 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	HHIPL2	Q6UWX4	724 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	TOGARAM2	Q6ZUX3	1019 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	KIF2C	Q99661	725 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	MTA3	Q9BTC8	594 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	ADAM21	Q9UKJ8	722 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	BAG5	Q9UL15	447 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	NFE2L3	Q9Y4A8	694 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	CROCC2	H7BZ55	1655 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	UNC13B	O14795	1591 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	ABCC3	O15438	1527 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	AGL	P35573	1532 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	PRMT3	O60678	531 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	CUL4A	Q13619	759 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	LAMC2	Q13753	1193 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	DGKD	Q16760	1214 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	ZNF667	Q5HYK9	610 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	ANKS3	Q6ZW76	656 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	VPS50	Q96JG6	964 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	MTR	Q99707	1265 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	STAP1	Q9ULZ2	295 aa		11.14	□□□□□ -0.63
TCF7-223	ENST00000522653	TRPM1	Q7Z4N2	1603 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	PAM	P19021	973 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	CYP2B6	P20813	491 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	DPYD	Q12882	1025 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	PTK2B	Q14289	1009 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	ANGEL2	Q5VTE6	544 aa	Known RBP	11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	EEPD1	Q7L9B9	569 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	ANKRD7	Q92527	254 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	EMILIN2	Q9BXX0	1053 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	TDRD3	Q9H7E2	651 aa	Known RBP	11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	MROH7	Q68CQ1	1323 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	LRRD1	A4D1F6	860 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	CYP2C19	P33261	490 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	CDK8	P49336	464 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	TSTA3	Q13630	321 aa	Predicted RBP	11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	GKAP1	Q5VSY0	366 aa	Predicted RBP	11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	CCDC170	Q8IYT3	715 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	TMEM199	Q8N511	208 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	SYNRG	Q9UMZ2	1314 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	HIP1R	O75146	1068 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	TFAM	Q00059	246 aa	Known RBP	11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	MTA1	Q13330	715 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	OOSP2	Q86WS3	158 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	LDHD	Q86WU2	507 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	GBP5	Q96PP8	586 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	MSTO1	Q9BUK6	570 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	SYNDIG1	Q9H7V2	258 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	RRAGC	Q9HB90	399 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	KCNK9	Q9NPC2	374 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	C1orf167	Q5SNV9	1468 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	LOC102724159	A0A0B4J2E5	919 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	SMIM23	A6NLE4	172 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	DLAT	P10515	647 aa	Known RBP	11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	LAMB3	Q13751	1172 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	PWP2	Q15269	919 aa	Known RBP	11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	FAM26F	Q5R3K3	315 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	SCFD2	Q8WU76	684 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	TNIP3	Q96KP6	325 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	TRIM4	Q9C037	500 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	TYW1	Q9NV66	732 aa	Known RBP	11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	PRDM4	Q9UKN5	801 aa		11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	CPSF1	Q10570	1443 aa	Known RBP	11.13	□□□□□ -0.63
TCF7-223	ENST00000522653	ADGRB3	O60242	1522 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	PRRG1	O14668	218 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	CHUK	O15111	745 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	ZBTB22	O15209	634 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	SLC26A4	O43511	780 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	CIB2	O75838	187 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	DYM	Q7RTS9	669 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	IL17RE	Q8NFR9	667 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	OSCP1	Q8WVF1	389 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	STAM	Q92783	540 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	PARD6B	Q9BYG5	372 aa		11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.12	□□□□□ -0.63
TCF7-223	ENST00000522653	ACTR5	Q9H9F9	607 aa	Predicted RBP	11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms