RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 MARK3P27448 753 aa18.21■□□□□ 0.51
LSM1-204ENST00000522515 PSMC6P62333 389 aa18.21■□□□□ 0.51
LSM1-204ENST00000522515 PRKCEQ02156 737 aa18.21■□□□□ 0.51
LSM1-204ENST00000522515 CXCL17Q6UXB2 119 aa18.21■□□□□ 0.51
LSM1-204ENST00000522515 KCNK18Q7Z418 384 aa18.21■□□□□ 0.51
LSM1-204ENST00000522515 PCSK9Q8NBP7 692 aaKnown RBP18.21■□□□□ 0.51
LSM1-204ENST00000522515 CRISPLD2Q9H0B8 497 aa18.21■□□□□ 0.51
LSM1-204ENST00000522515 NT5C3AQ9H0P0 336 aa18.21■□□□□ 0.51
LSM1-204ENST00000522515 TUT1Q9H6E5 874 aaKnown RBP18.21■□□□□ 0.51
LSM1-204ENST00000522515 POLR2DO15514 142 aaKnown RBP18.2■□□□□ 0.5
LSM1-204ENST00000522515 ZEB2O60315 1214 aa18.2■□□□□ 0.5
LSM1-204ENST00000522515 KPNA6O60684 536 aa18.2■□□□□ 0.5
LSM1-204ENST00000522515 DKC1O60832 514 aaKnown RBP eCLIP18.2■□□□□ 0.5
LSM1-204ENST00000522515 STBD1O95210 358 aa18.2■□□□□ 0.5
LSM1-204ENST00000522515 LYPLA2O95372 231 aa18.2■□□□□ 0.5
LSM1-204ENST00000522515 F2P00734 622 aa18.2■□□□□ 0.5
LSM1-204ENST00000522515 LIG1P18858 919 aa18.2■□□□□ 0.5
LSM1-204ENST00000522515 COL13A1Q5TAT6 717 aaPredicted RBP18.2■□□□□ 0.5
LSM1-204ENST00000522515 CKAP2LQ8IYA6 745 aa18.2■□□□□ 0.5
LSM1-204ENST00000522515 PIGOQ8TEQ8 1089 aa18.2■□□□□ 0.5
LSM1-204ENST00000522515 RNPEPQ9H4A4 650 aa18.2■□□□□ 0.5
LSM1-204ENST00000522515 ERAP1Q9NZ08 941 aa18.2■□□□□ 0.5
LSM1-204ENST00000522515 MYH9P35579 1960 aaKnown RBP18.2■□□□□ 0.5
LSM1-204ENST00000522515 TMEM150BA6NC51 233 aa18.19■□□□□ 0.5
LSM1-204ENST00000522515 E9PMD0 336 aa18.19■□□□□ 0.5
LSM1-204ENST00000522515 OATP04181 439 aa18.19■□□□□ 0.5
LSM1-204ENST00000522515 SLC26A2P50443 739 aa18.19■□□□□ 0.5
LSM1-204ENST00000522515 ACLYP53396 1101 aa18.19■□□□□ 0.5
LSM1-204ENST00000522515 PLCB4Q15147 1175 aa18.19■□□□□ 0.5
LSM1-204ENST00000522515 NAALADL2Q58DX5 795 aa18.19■□□□□ 0.5
LSM1-204ENST00000522515 RRAGBQ5VZM2 374 aa18.19■□□□□ 0.5
LSM1-204ENST00000522515 NACC1Q96RE7 527 aa18.19■□□□□ 0.5
LSM1-204ENST00000522515 TSEN34Q9BSV6 310 aaKnown RBP18.19■□□□□ 0.5
LSM1-204ENST00000522515 MTG1Q9BT17 334 aaPredicted RBP18.19■□□□□ 0.5
LSM1-204ENST00000522515 ZNF215Q9UL58 517 aaPredicted RBP18.19■□□□□ 0.5
LSM1-204ENST00000522515 TFRCP02786 760 aaKnown RBP18.18■□□□□ 0.5
LSM1-204ENST00000522515 YWHABP31946 246 aaKnown RBP18.18■□□□□ 0.5
LSM1-204ENST00000522515 SYKP43405 635 aa18.18■□□□□ 0.5
LSM1-204ENST00000522515 GJA8P48165 433 aa18.18■□□□□ 0.5
LSM1-204ENST00000522515 CHMP4BP1P59074 171 aa18.18■□□□□ 0.5
LSM1-204ENST00000522515 SNW1Q13573 536 aaKnown RBP18.18■□□□□ 0.5
LSM1-204ENST00000522515 E2F4Q16254 413 aa18.18■□□□□ 0.5
LSM1-204ENST00000522515 XKR3Q5GH77 459 aa18.18■□□□□ 0.5
LSM1-204ENST00000522515 CCDC73Q6ZRK6 1079 aa18.18■□□□□ 0.5
LSM1-204ENST00000522515 ANO5Q75V66 913 aa18.18■□□□□ 0.5
LSM1-204ENST00000522515 ENGASEQ8NFI3 743 aa18.18■□□□□ 0.5
LSM1-204ENST00000522515 ATP8B4Q8TF62 1192 aa18.18■□□□□ 0.5
LSM1-204ENST00000522515 PPP1R13LQ8WUF5 828 aa18.18■□□□□ 0.5
LSM1-204ENST00000522515 DHX58Q96C10 678 aa18.18■□□□□ 0.5
LSM1-204ENST00000522515 SH2D3AQ9BRG2 576 aa18.18■□□□□ 0.5
LSM1-204ENST00000522515 TMEM106CQ9BVX2 250 aa18.18■□□□□ 0.5
LSM1-204ENST00000522515 BLOC1S4Q9NUP1 217 aa18.18■□□□□ 0.5
LSM1-204ENST00000522515 MOXD2PA6NHM9 499 aa18.17■□□□□ 0.5
LSM1-204ENST00000522515 DDX11L8A8MPP1 907 aa18.17■□□□□ 0.5
LSM1-204ENST00000522515 KBTBD13C9JR72 458 aa18.17■□□□□ 0.5
LSM1-204ENST00000522515 HAS3O00219 553 aa18.17■□□□□ 0.5
LSM1-204ENST00000522515 DNM1LO00429 736 aa18.17■□□□□ 0.5
LSM1-204ENST00000522515 STAT6P42226 847 aa18.17■□□□□ 0.5
LSM1-204ENST00000522515 PSEN2P49810 448 aa18.17■□□□□ 0.5
LSM1-204ENST00000522515 FAM160A1Q05DH4 1040 aa18.17■□□□□ 0.5
LSM1-204ENST00000522515 MFSD10Q14728 455 aa18.17■□□□□ 0.5
LSM1-204ENST00000522515 KIAA0753Q2KHM9 967 aa18.17■□□□□ 0.5
LSM1-204ENST00000522515 FMR1NBQ8N0W7 255 aaPredicted RBP18.17■□□□□ 0.5
LSM1-204ENST00000522515 SEPT9Q9UHD8 586 aaPredicted RBP18.17■□□□□ 0.5
LSM1-204ENST00000522515 DNM3Q9UQ16 869 aa18.17■□□□□ 0.5
LSM1-204ENST00000522515 NR1I2O75469 434 aa18.17■□□□□ 0.5
LSM1-204ENST00000522515 ZNF202O95125 648 aa18.17■□□□□ 0.5
LSM1-204ENST00000522515 PLA2G4FQ68DD2 849 aa18.17■□□□□ 0.5
LSM1-204ENST00000522515 KCTD17Q8N5Z5 321 aa18.17■□□□□ 0.5
LSM1-204ENST00000522515 IQUBQ8NA54 791 aa18.17■□□□□ 0.5
LSM1-204ENST00000522515 BBXQ8WY36 941 aaPredicted RBP18.17■□□□□ 0.5
LSM1-204ENST00000522515 FAM167AQ96KS9 214 aa18.17■□□□□ 0.5
LSM1-204ENST00000522515 KATNAL1Q9BW62 490 aa18.17■□□□□ 0.5
LSM1-204ENST00000522515 BHMT2Q9H2M3 363 aa18.17■□□□□ 0.5
LSM1-204ENST00000522515 NRBP2Q9NSY0 501 aa18.17■□□□□ 0.5
LSM1-204ENST00000522515 PHF24Q9UPV7 400 aa18.17■□□□□ 0.5
LSM1-204ENST00000522515 TRPC6Q9Y210 931 aa18.17■□□□□ 0.5
LSM1-204ENST00000522515 EYA4O95677 639 aa18.16■□□□□ 0.5
LSM1-204ENST00000522515 XRCC6P12956 609 aaKnown RBP eCLIP18.16■□□□□ 0.5
LSM1-204ENST00000522515 MNX1P50219 401 aaPredicted RBP18.16■□□□□ 0.5
LSM1-204ENST00000522515 NPEPPSP55786 919 aa18.16■□□□□ 0.5
LSM1-204ENST00000522515 LONRF3Q496Y0 759 aa18.16■□□□□ 0.5
LSM1-204ENST00000522515 OTUD6AQ7L8S5 288 aa18.16■□□□□ 0.5
LSM1-204ENST00000522515 GPT2Q8TD30 523 aa18.16■□□□□ 0.5
LSM1-204ENST00000522515 RAD54LQ92698 747 aa18.16■□□□□ 0.5
LSM1-204ENST00000522515 ANKEF1Q9NU02 776 aa18.16■□□□□ 0.5
LSM1-204ENST00000522515 STK17AQ9UEE5 414 aa18.16■□□□□ 0.5
LSM1-204ENST00000522515 SERTAD1Q9UHV2 236 aa18.16■□□□□ 0.5
LSM1-204ENST00000522515 SCN10AQ9Y5Y9 1956 aa18.15■□□□□ 0.5
LSM1-204ENST00000522515 A0A1W2PQ45 241 aaPredicted RBP18.15■□□□□ 0.5
LSM1-204ENST00000522515 A0A1W2PQY0 241 aa18.15■□□□□ 0.5
LSM1-204ENST00000522515 ACTN4O43707 911 aaKnown RBP18.15■□□□□ 0.5
LSM1-204ENST00000522515 HBP1O60381 514 aa18.15■□□□□ 0.5
LSM1-204ENST00000522515 CABYRO75952 493 aa18.15■□□□□ 0.5
LSM1-204ENST00000522515 RARRES1P49788 294 aa18.15■□□□□ 0.5
LSM1-204ENST00000522515 MCM6Q14566 821 aa18.15■□□□□ 0.5
LSM1-204ENST00000522515 NFKBIBQ15653 356 aa18.15■□□□□ 0.5
LSM1-204ENST00000522515 LARP4BQ92615 738 aaKnown RBP18.15■□□□□ 0.5
LSM1-204ENST00000522515 GLT1D1Q96MS3 346 aa18.15■□□□□ 0.5
LSM1-204ENST00000522515 PYM1Q9BRP8 204 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms