RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ZNF302Q9NR11 478 aa23.51■■□□□ 1.35
SDCBP-209ENST00000522243 PDRG1Q9NUG6 133 aa23.51■■□□□ 1.35
SDCBP-209ENST00000522243 PRUNE2Q8WUY3 3088 aa23.51■■□□□ 1.35
SDCBP-209ENST00000522243 CHD7Q9P2D1 2997 aa23.51■■□□□ 1.35
SDCBP-209ENST00000522243 CPLX1O14810 134 aa23.5■■□□□ 1.35
SDCBP-209ENST00000522243 SETQ01105 290 aaPredicted RBP23.5■■□□□ 1.35
SDCBP-209ENST00000522243 MIS18BP1Q6P0N0 1132 aa23.5■■□□□ 1.35
SDCBP-209ENST00000522243 PDXDC2PQ6P474 469 aa23.5■■□□□ 1.35
SDCBP-209ENST00000522243 MTHFD1LQ6UB35 978 aa23.5■■□□□ 1.35
SDCBP-209ENST00000522243 TRMT1LQ7Z2T5 733 aaKnown RBP23.5■■□□□ 1.35
SDCBP-209ENST00000522243 TRIM22Q8IYM9 498 aa23.5■■□□□ 1.35
SDCBP-209ENST00000522243 SP7Q8TDD2 431 aaPredicted RBP23.5■■□□□ 1.35
SDCBP-209ENST00000522243 AGO3Q9H9G7 860 aaKnown RBP23.5■■□□□ 1.35
SDCBP-209ENST00000522243 PCDHA2Q9Y5H9 948 aa23.5■■□□□ 1.35
SDCBP-209ENST00000522243 CD52P31358 61 aa23.49■■□□□ 1.35
SDCBP-209ENST00000522243 SLC26A2P50443 739 aa23.49■■□□□ 1.35
SDCBP-209ENST00000522243 IER5Q5VY09 327 aa23.49■■□□□ 1.35
SDCBP-209ENST00000522243 FBXO22Q8NEZ5 403 aa23.49■■□□□ 1.35
SDCBP-209ENST00000522243 ZNF274Q96GC6 653 aaPredicted RBP23.49■■□□□ 1.35
SDCBP-209ENST00000522243 TBC1D22BQ9NU19 505 aa23.49■■□□□ 1.35
SDCBP-209ENST00000522243 TRPV2Q9Y5S1 764 aa23.49■■□□□ 1.35
SDCBP-209ENST00000522243 MYH9P35579 1960 aaKnown RBP23.49■■□□□ 1.35
SDCBP-209ENST00000522243 NLRC5Q86WI3 1866 aa23.48■■□□□ 1.35
SDCBP-209ENST00000522243 M0QZ92 97 aa23.48■■□□□ 1.35
SDCBP-209ENST00000522243 ENPP3O14638 875 aa23.48■■□□□ 1.35
SDCBP-209ENST00000522243 EDIL3O43854 480 aa23.48■■□□□ 1.35
SDCBP-209ENST00000522243 HBP1O60381 514 aa23.48■■□□□ 1.35
SDCBP-209ENST00000522243 ATP4AP20648 1035 aa23.48■■□□□ 1.35
SDCBP-209ENST00000522243 KLRC1P26715 233 aa23.48■■□□□ 1.35
SDCBP-209ENST00000522243 CIITAP33076 1130 aa23.48■■□□□ 1.35
SDCBP-209ENST00000522243 TSHZ1Q6ZSZ6 1077 aa23.48■■□□□ 1.35
SDCBP-209ENST00000522243 CKAP2LQ8IYA6 745 aa23.48■■□□□ 1.35
SDCBP-209ENST00000522243 ATP8B4Q8TF62 1192 aa23.48■■□□□ 1.35
SDCBP-209ENST00000522243 AIFM3Q96NN9 605 aa23.48■■□□□ 1.35
SDCBP-209ENST00000522243 SH3GLB2Q9NR46 395 aa23.48■■□□□ 1.35
SDCBP-209ENST00000522243 TCF20Q9UGU0 1960 aaKnown RBP23.48■■□□□ 1.35
SDCBP-209ENST00000522243 EVPLQ92817 2033 aa23.47■■□□□ 1.35
SDCBP-209ENST00000522243 SMIM35A0A1B0GVV1 85 aa23.47■■□□□ 1.35
SDCBP-209ENST00000522243 ZNF746Q6NUN9 644 aaPredicted RBP23.47■■□□□ 1.35
SDCBP-209ENST00000522243 LENG9Q96B70 501 aa23.47■■□□□ 1.35
SDCBP-209ENST00000522243 WDR81Q562E7 1941 aa23.47■■□□□ 1.35
SDCBP-209ENST00000522243 DTNBO60941 627 aa23.46■■□□□ 1.35
SDCBP-209ENST00000522243 DEXIO95424 95 aa23.46■■□□□ 1.35
SDCBP-209ENST00000522243 RPLP2P05387 115 aaKnown RBP23.46■■□□□ 1.35
SDCBP-209ENST00000522243 EPC2Q52LR7 807 aa23.46■■□□□ 1.35
SDCBP-209ENST00000522243 IL27Q8NEV9 243 aa23.46■■□□□ 1.35
SDCBP-209ENST00000522243 ADAMTS19Q8TE59 1207 aa23.46■■□□□ 1.35
SDCBP-209ENST00000522243 CELF4Q9BZC1 486 aaKnown RBP23.46■■□□□ 1.35
SDCBP-209ENST00000522243 LMCD1Q9NZU5 365 aa23.46■■□□□ 1.35
SDCBP-209ENST00000522243 TCEAL9Q9UHQ7 104 aa23.46■■□□□ 1.35
SDCBP-209ENST00000522243 PCDHA4Q9UN74 947 aa23.46■■□□□ 1.35
SDCBP-209ENST00000522243 GINS2Q9Y248 185 aa23.46■■□□□ 1.35
SDCBP-209ENST00000522243 SAMM50Q9Y512 469 aa23.46■■□□□ 1.35
SDCBP-209ENST00000522243 PSAPP07602 524 aa23.45■■□□□ 1.34
SDCBP-209ENST00000522243 KCNQ1P51787 676 aa23.45■■□□□ 1.34
SDCBP-209ENST00000522243 KRT76Q01546 638 aa23.45■■□□□ 1.34
SDCBP-209ENST00000522243 CPLX2Q6PUV4 134 aaKnown RBP23.45■■□□□ 1.34
SDCBP-209ENST00000522243 TBCKQ8TEA7 893 aa23.45■■□□□ 1.34
SDCBP-209ENST00000522243 LINC01599Q8WXQ3 324 aa23.45■■□□□ 1.34
SDCBP-209ENST00000522243 GJA10Q969M2 543 aa23.45■■□□□ 1.34
SDCBP-209ENST00000522243 IL17RAQ96F46 866 aa23.45■■□□□ 1.34
SDCBP-209ENST00000522243 GABBR1Q9UBS5 961 aa23.45■■□□□ 1.34
SDCBP-209ENST00000522243 PCDHA10Q9Y5I2 948 aa23.45■■□□□ 1.34
SDCBP-209ENST00000522243 COL1A2P08123 1366 aa23.44■■□□□ 1.34
SDCBP-209ENST00000522243 MSH4O15457 936 aa23.44■■□□□ 1.34
SDCBP-209ENST00000522243 USP11P51784 963 aa23.44■■□□□ 1.34
SDCBP-209ENST00000522243 ZNF484Q5JVG2 852 aa23.44■■□□□ 1.34
SDCBP-209ENST00000522243 RTN4RL1Q86UN2 441 aaPredicted RBP23.44■■□□□ 1.34
SDCBP-209ENST00000522243 TMEM192Q8IY95 271 aa23.44■■□□□ 1.34
SDCBP-209ENST00000522243 SMAP1Q8IYB5 467 aaPredicted RBP23.44■■□□□ 1.34
SDCBP-209ENST00000522243 BLIDQ8IZY5 108 aa23.44■■□□□ 1.34
SDCBP-209ENST00000522243 NME8Q8N427 588 aa23.44■■□□□ 1.34
SDCBP-209ENST00000522243 FIBCD1Q8N539 461 aa23.44■■□□□ 1.34
SDCBP-209ENST00000522243 SAMD11Q96NU1 681 aa23.44■■□□□ 1.34
SDCBP-209ENST00000522243 PPP1R16BQ96T49 567 aa23.44■■□□□ 1.34
SDCBP-209ENST00000522243 PADI3Q9ULW8 664 aa23.44■■□□□ 1.34
SDCBP-209ENST00000522243 MAFBQ9Y5Q3 323 aaPredicted RBP23.44■■□□□ 1.34
SDCBP-209ENST00000522243 A0A0C4DFX4 3053 aa23.44■■□□□ 1.34
SDCBP-209ENST00000522243 IGSF9BQ9UPX0 1349 aa23.43■■□□□ 1.34
SDCBP-209ENST00000522243 ZBTB42B2RXF5 422 aa23.43■■□□□ 1.34
SDCBP-209ENST00000522243 SCRN1Q12765 414 aa23.43■■□□□ 1.34
SDCBP-209ENST00000522243 PAK2Q13177 524 aa23.43■■□□□ 1.34
SDCBP-209ENST00000522243 TMEM266Q2M3C6 531 aa23.43■■□□□ 1.34
SDCBP-209ENST00000522243 BBXQ8WY36 941 aaPredicted RBP23.43■■□□□ 1.34
SDCBP-209ENST00000522243 CDHR5Q9HBB8 845 aa23.43■■□□□ 1.34
SDCBP-209ENST00000522243 SQORQ9Y6N5 450 aa23.43■■□□□ 1.34
SDCBP-209ENST00000522243 RALGAPA2Q2PPJ7 1873 aa23.43■■□□□ 1.34
SDCBP-209ENST00000522243 TTC3P53804 2025 aa23.42■■□□□ 1.34
SDCBP-209ENST00000522243 CHMP2AO43633 222 aa23.42■■□□□ 1.34
SDCBP-209ENST00000522243 BMP1P13497 986 aa23.42■■□□□ 1.34
SDCBP-209ENST00000522243 GPM6BQ13491 265 aa23.42■■□□□ 1.34
SDCBP-209ENST00000522243 AAK1Q2M2I8 961 aa23.42■■□□□ 1.34
SDCBP-209ENST00000522243 KIAA0319LQ8IZA0 1049 aa23.42■■□□□ 1.34
SDCBP-209ENST00000522243 HLA-CQ95604 372 aa23.42■■□□□ 1.34
SDCBP-209ENST00000522243 SLKQ9H2G2 1235 aaPredicted RBP23.42■■□□□ 1.34
SDCBP-209ENST00000522243 TPCN1Q9ULQ1 816 aa23.42■■□□□ 1.34
SDCBP-209ENST00000522243 KCNJ14Q9UNX9 436 aa23.42■■□□□ 1.34
SDCBP-209ENST00000522243 COG5Q9UP83 839 aa23.42■■□□□ 1.34
SDCBP-209ENST00000522243 COL4A6Q14031 1691 aa23.41■■□□□ 1.34
SDCBP-209ENST00000522243 KDM3AQ9Y4C1 1321 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms