RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 TCEAL9Q9UHQ7 104 aa20.23■□□□□ 0.83
TRAPPC9-211ENST00000521700 PCDHA2Q9Y5H9 948 aa20.23■□□□□ 0.83
TRAPPC9-211ENST00000521700 CDH23Q9H251 3354 aa20.22■□□□□ 0.83
TRAPPC9-211ENST00000521700 CCDC194A0A1B0GVG4 234 aa20.22■□□□□ 0.83
TRAPPC9-211ENST00000521700 GAS7O60861 476 aa20.22■□□□□ 0.83
TRAPPC9-211ENST00000521700 RBM25P49756 843 aaKnown RBP20.22■□□□□ 0.83
TRAPPC9-211ENST00000521700 MKRN4PQ13434 485 aaPredicted RBP20.22■□□□□ 0.83
TRAPPC9-211ENST00000521700 LRCH2Q5VUJ6 765 aa20.22■□□□□ 0.83
TRAPPC9-211ENST00000521700 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.22■□□□□ 0.83
TRAPPC9-211ENST00000521700 SEPT8Q92599 483 aa20.22■□□□□ 0.83
TRAPPC9-211ENST00000521700 TEKT3Q9BXF9 490 aa20.22■□□□□ 0.83
TRAPPC9-211ENST00000521700 FAM49AQ9H0Q0 323 aaPredicted RBP20.22■□□□□ 0.83
TRAPPC9-211ENST00000521700 GABBR1Q9UBS5 961 aa20.22■□□□□ 0.83
TRAPPC9-211ENST00000521700 MYH9P35579 1960 aaKnown RBP20.22■□□□□ 0.83
TRAPPC9-211ENST00000521700 WDR64B1ANS9 1081 aa20.21■□□□□ 0.83
TRAPPC9-211ENST00000521700 KIF28PB7ZC32 967 aa20.21■□□□□ 0.83
TRAPPC9-211ENST00000521700 PSMD10O75832 226 aa20.21■□□□□ 0.83
TRAPPC9-211ENST00000521700 CA3P07451 260 aa20.21■□□□□ 0.83
TRAPPC9-211ENST00000521700 KLRC1P26715 233 aa20.21■□□□□ 0.83
TRAPPC9-211ENST00000521700 LETM2Q2VYF4 491 aa20.21■□□□□ 0.83
TRAPPC9-211ENST00000521700 EARS2Q5JPH6 523 aaKnown RBP20.21■□□□□ 0.83
TRAPPC9-211ENST00000521700 PPP2R2DQ66LE6 453 aa20.21■□□□□ 0.83
TRAPPC9-211ENST00000521700 MTHFD1LQ6UB35 978 aa20.21■□□□□ 0.83
TRAPPC9-211ENST00000521700 PIK3AP1Q6ZUJ8 805 aa20.21■□□□□ 0.83
TRAPPC9-211ENST00000521700 UNC45AQ9H3U1 944 aa20.21■□□□□ 0.83
TRAPPC9-211ENST00000521700 PRDM12Q9H4Q4 367 aa20.21■□□□□ 0.83
TRAPPC9-211ENST00000521700 DISC1Q9NRI5 854 aa20.21■□□□□ 0.83
TRAPPC9-211ENST00000521700 DDX25Q9UHL0 483 aaKnown RBP20.21■□□□□ 0.83
TRAPPC9-211ENST00000521700 SAMM50Q9Y512 469 aa20.21■□□□□ 0.83
TRAPPC9-211ENST00000521700 CDY2AQ9Y6F7 541 aa20.21■□□□□ 0.83
TRAPPC9-211ENST00000521700 WDR81Q562E7 1941 aa20.21■□□□□ 0.83
TRAPPC9-211ENST00000521700 COL6A3P12111 3177 aa20.21■□□□□ 0.83
TRAPPC9-211ENST00000521700 MYO9BQ13459 2157 aa20.21■□□□□ 0.83
TRAPPC9-211ENST00000521700 SMIM35A0A1B0GVV1 85 aa20.2■□□□□ 0.82
TRAPPC9-211ENST00000521700 ZBTB42B2RXF5 422 aa20.2■□□□□ 0.82
TRAPPC9-211ENST00000521700 SLC37A4O43826 429 aa20.2■□□□□ 0.82
TRAPPC9-211ENST00000521700 FOSL2P15408 326 aa20.2■□□□□ 0.82
TRAPPC9-211ENST00000521700 MRPS6P82932 125 aaKnown RBP20.2■□□□□ 0.82
TRAPPC9-211ENST00000521700 NR5A1Q13285 461 aa20.2■□□□□ 0.82
TRAPPC9-211ENST00000521700 ZNF484Q5JVG2 852 aa20.2■□□□□ 0.82
TRAPPC9-211ENST00000521700 NEK8Q86SG6 692 aa20.2■□□□□ 0.82
TRAPPC9-211ENST00000521700 CKAP2LQ8IYA6 745 aa20.2■□□□□ 0.82
TRAPPC9-211ENST00000521700 ETNPPLQ8TBG4 499 aa20.2■□□□□ 0.82
TRAPPC9-211ENST00000521700 BBXQ8WY36 941 aaPredicted RBP20.2■□□□□ 0.82
TRAPPC9-211ENST00000521700 SIP14410 1827 aa20.2■□□□□ 0.82
TRAPPC9-211ENST00000521700 COL1A2P08123 1366 aa20.2■□□□□ 0.82
TRAPPC9-211ENST00000521700 MICAL3Q7RTP6 2002 aa20.19■□□□□ 0.82
TRAPPC9-211ENST00000521700 CHMP2AO43633 222 aa20.19■□□□□ 0.82
TRAPPC9-211ENST00000521700 TLL1O43897 1013 aa20.19■□□□□ 0.82
TRAPPC9-211ENST00000521700 ARHGEF15O94989 841 aa20.19■□□□□ 0.82
TRAPPC9-211ENST00000521700 GJB5O95377 273 aa20.19■□□□□ 0.82
TRAPPC9-211ENST00000521700 RPLP2P05387 115 aaKnown RBP20.19■□□□□ 0.82
TRAPPC9-211ENST00000521700 GHRP10912 638 aa20.19■□□□□ 0.82
TRAPPC9-211ENST00000521700 SFNP31947 248 aa20.19■□□□□ 0.82
TRAPPC9-211ENST00000521700 KRT2P35908 639 aa20.19■□□□□ 0.82
TRAPPC9-211ENST00000521700 JAK3P52333 1124 aa20.19■□□□□ 0.82
TRAPPC9-211ENST00000521700 LPIN1Q14693 890 aa20.19■□□□□ 0.82
TRAPPC9-211ENST00000521700 PPP4R3AQ6IN85 833 aa20.19■□□□□ 0.82
TRAPPC9-211ENST00000521700 B3GNT9Q6UX72 402 aa20.19■□□□□ 0.82
TRAPPC9-211ENST00000521700 TRMT1LQ7Z2T5 733 aaKnown RBP20.19■□□□□ 0.82
TRAPPC9-211ENST00000521700 CCDC83Q8IWF9 413 aa20.19■□□□□ 0.82
TRAPPC9-211ENST00000521700 TNFRSF25Q93038 417 aa20.19■□□□□ 0.82
TRAPPC9-211ENST00000521700 ZBED2Q9BTP6 218 aa20.19■□□□□ 0.82
TRAPPC9-211ENST00000521700 IFIH1Q9BYX4 1025 aaKnown RBP20.19■□□□□ 0.82
TRAPPC9-211ENST00000521700 IGSF9BQ9UPX0 1349 aa20.19■□□□□ 0.82
TRAPPC9-211ENST00000521700 FAM205CA6NFA0 338 aa20.18■□□□□ 0.82
TRAPPC9-211ENST00000521700 ZNF862O60290 1169 aa20.18■□□□□ 0.82
TRAPPC9-211ENST00000521700 MMP1P03956 469 aa20.18■□□□□ 0.82
TRAPPC9-211ENST00000521700 FOSBP53539 338 aa20.18■□□□□ 0.82
TRAPPC9-211ENST00000521700 TMEM62Q0P6H9 643 aa20.18■□□□□ 0.82
TRAPPC9-211ENST00000521700 FBXO47Q5MNV8 452 aa20.18■□□□□ 0.82
TRAPPC9-211ENST00000521700 IER5Q5VY09 327 aa20.18■□□□□ 0.82
TRAPPC9-211ENST00000521700 KRT40Q6A162 431 aa20.18■□□□□ 0.82
TRAPPC9-211ENST00000521700 FAM117BQ6P1L5 589 aa20.18■□□□□ 0.82
TRAPPC9-211ENST00000521700 NME8Q8N427 588 aa20.18■□□□□ 0.82
TRAPPC9-211ENST00000521700 APBB2Q92870 758 aa20.18■□□□□ 0.82
TRAPPC9-211ENST00000521700 ZSCAN31Q96LW9 406 aaPredicted RBP20.18■□□□□ 0.82
TRAPPC9-211ENST00000521700 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.17■□□□□ 0.82
TRAPPC9-211ENST00000521700 LCHNA4D1U4 455 aa20.17■□□□□ 0.82
TRAPPC9-211ENST00000521700 BTBD18B2RXH4 712 aa20.17■□□□□ 0.82
TRAPPC9-211ENST00000521700 CCNT1O60563 726 aaKnown RBP20.17■□□□□ 0.82
TRAPPC9-211ENST00000521700 AMHP03971 560 aa20.17■□□□□ 0.82
TRAPPC9-211ENST00000521700 GCFC2P16383 781 aaKnown RBP20.17■□□□□ 0.82
TRAPPC9-211ENST00000521700 TAP1Q03518 808 aa20.17■□□□□ 0.82
TRAPPC9-211ENST00000521700 ADGRE1Q14246 886 aa20.17■□□□□ 0.82
TRAPPC9-211ENST00000521700 UGCGQ16739 394 aa20.17■□□□□ 0.82
TRAPPC9-211ENST00000521700 MIER3Q7Z3K6 550 aa20.17■□□□□ 0.82
TRAPPC9-211ENST00000521700 KIAA0319LQ8IZA0 1049 aa20.17■□□□□ 0.82
TRAPPC9-211ENST00000521700 SLC17A8Q8NDX2 589 aa20.17■□□□□ 0.82
TRAPPC9-211ENST00000521700 RDM1Q8NG50 284 aa20.17■□□□□ 0.82
TRAPPC9-211ENST00000521700 MAFAQ8NHW3 353 aaPredicted RBP20.17■□□□□ 0.82
TRAPPC9-211ENST00000521700 LLPHQ9BRT6 129 aaKnown RBP20.17■□□□□ 0.82
TRAPPC9-211ENST00000521700 BRMS1Q9HCU9 246 aa20.17■□□□□ 0.82
TRAPPC9-211ENST00000521700 KCNMB3Q9NPA1 279 aa20.17■□□□□ 0.82
TRAPPC9-211ENST00000521700 TRPV2Q9Y5S1 764 aa20.17■□□□□ 0.82
TRAPPC9-211ENST00000521700 CHD9Q3L8U1 2897 aa20.17■□□□□ 0.82
TRAPPC9-211ENST00000521700 EVPLQ92817 2033 aa20.17■□□□□ 0.82
TRAPPC9-211ENST00000521700 C22orf31O95567 290 aa20.16■□□□□ 0.82
TRAPPC9-211ENST00000521700 TRIM29Q14134 588 aa20.16■□□□□ 0.82
TRAPPC9-211ENST00000521700 DIS3L2Q8IYB7 885 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms