RNA–Protein interactions for RNA: ENST00000521491.1

CDH17-205, Transcript of cadherin 17, human

TSL 5

Gene CDH17, Length 637 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH17-205	ENST00000521491	COL6A1	P12109	1028 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	ALAS1	P13196	640 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	CAPN2	P17655	700 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	U2AF2	P26368	475 aa	Known RBP eCLIP	6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	CALML3	P27482	149 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	NOS2	P35228	1153 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	IRX3	P78415	501 aa	Predicted RBP	6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	CEBPZ	Q03701	1054 aa	Known RBP	6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	DNM1	Q05193	864 aa	Known RBP	6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	CACNB2	Q08289	660 aa	Predicted RBP	6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	PLS1	Q14651	629 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	COG2	Q14746	738 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	TMEM132B	Q14DG7	1078 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	LRRC26	Q2I0M4	334 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	WDR44	Q5JSH3	913 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	UTP14C	Q5TAP6	766 aa	Known RBP	6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	TAF3	Q5VWG9	929 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	JAKMIP3	Q5VZ66	844 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	SNRNP48	Q6IEG0	339 aa	Known RBP	6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	PIK3AP1	Q6ZUJ8	805 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	BRAP	Q7Z569	592 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	NOSTRIN	Q8IVI9	506 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	DAGLB	Q8NCG7	672 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	REPS2	Q8NFH8	660 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	CUL5	Q93034	780 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	TNFRSF25	Q93038	417 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	ZFP42	Q96MM3	310 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	GBP4	Q96PP9	640 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	PAGR1	Q9BTK6	254 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	MKNK1	Q9BUB5	465 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	COL25A1	Q9BXS0	654 aa	Predicted RBP	6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	ZMYND12	Q9H0C1	365 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	PORCN	Q9H237	461 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	FOXP1	Q9H334	677 aa	Predicted RBP	6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	C6orf50	Q9HD87	102 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	RIC8A	Q9NPQ8	531 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	PCDHA6	Q9UN73	950 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	ZNF232	Q9UNY5	417 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	PCDHA8	Q9Y5H6	950 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	IVNS1ABP	Q9Y6Y0	642 aa		6.15	□□□□□ -1.42
CDH17-205	ENST00000521491	ABCB11	O95342	1321 aa		6.15	□□□□□ -1.43
CDH17-205	ENST00000521491	DOCK5	Q9H7D0	1870 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	CCDC194	A0A1B0GVG4	234 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	EML1	O00423	815 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	NFIB	O00712	420 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	CNMD	O75829	334 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	CFB	P00751	764 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	ATP2B1	P20020	1258 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	GNA11	P29992	359 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	HOXA7	P31268	230 aa	Predicted RBP	6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	HOXA13	P31271	388 aa	Predicted RBP	6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	HERVK_113	P62684	666 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	PABPC4	Q13310	644 aa	Known RBP eCLIP	6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	INF2	Q27J81	1249 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	MUM1L1	Q5H9M0	696 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	GALNT17	Q6IS24	598 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	USP17L6P	Q6QN14	398 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	REXO1	Q8N1G1	1221 aa	Known RBP	6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	RGS22	Q8NE09	1264 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	GPRC5A	Q8NFJ5	357 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	BICD2	Q8TD16	824 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	ZDHHC1	Q8WTX9	485 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	USP6NL	Q92738	828 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	FAM161B	Q96MY7	647 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	USP28	Q96RU2	1077 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	PSTPIP2	Q9H939	334 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	FLRT1	Q9NZU1	646 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	BTBD7	Q9P203	1132 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	PRDM4	Q9UKN5	801 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	ADAMTS5	Q9UNA0	930 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	RIPK3	Q9Y572	518 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	ATP6V1D	Q9Y5K8	247 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	CLIC4	Q9Y696	253 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	KIAA1217	Q5T5P2	1943 aa		6.14	□□□□□ -1.43
CDH17-205	ENST00000521491	FRMPD3	Q5JV73	1810 aa		6.13	□□□□□ -1.43
CDH17-205	ENST00000521491	MEIS2	O14770	477 aa		6.13	□□□□□ -1.43
CDH17-205	ENST00000521491	XRCC5	P13010	732 aa	Known RBP	6.13	□□□□□ -1.43
CDH17-205	ENST00000521491	PLA2G4A	P47712	749 aa		6.13	□□□□□ -1.43
CDH17-205	ENST00000521491	TOB1	P50616	345 aa	Predicted RBP	6.13	□□□□□ -1.43
CDH17-205	ENST00000521491	MRPL12	P52815	198 aa	Known RBP	6.13	□□□□□ -1.43
CDH17-205	ENST00000521491	KRT85	P78386	507 aa		6.13	□□□□□ -1.43
CDH17-205	ENST00000521491	NONO	Q15233	471 aa	Known RBP eCLIP	6.13	□□□□□ -1.43
CDH17-205	ENST00000521491	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	6.13	□□□□□ -1.43
CDH17-205	ENST00000521491	C4orf17	Q53FE4	359 aa		6.13	□□□□□ -1.43
CDH17-205	ENST00000521491	SLC30A10	Q6XR72	485 aa		6.13	□□□□□ -1.43
CDH17-205	ENST00000521491	LBX2	Q6XYB7	198 aa		6.13	□□□□□ -1.43
CDH17-205	ENST00000521491	PRICKLE2	Q7Z3G6	844 aa		6.13	□□□□□ -1.43
CDH17-205	ENST00000521491	KRT25	Q7Z3Z0	450 aa		6.13	□□□□□ -1.43
CDH17-205	ENST00000521491	GPR142	Q7Z601	462 aa		6.13	□□□□□ -1.43
CDH17-205	ENST00000521491	FAM177A1	Q8N128	213 aa	Predicted RBP	6.13	□□□□□ -1.43
CDH17-205	ENST00000521491	CLEC4D	Q8WXI8	215 aa		6.13	□□□□□ -1.43
CDH17-205	ENST00000521491	TBC1D5	Q92609	795 aa		6.13	□□□□□ -1.43
CDH17-205	ENST00000521491	SPATA32	Q96LK8	384 aa		6.13	□□□□□ -1.43
CDH17-205	ENST00000521491	ZNF396	Q96N95	335 aa	Predicted RBP	6.13	□□□□□ -1.43
CDH17-205	ENST00000521491	GUCD1	Q96NT3	240 aa		6.13	□□□□□ -1.43
CDH17-205	ENST00000521491	TRERF1	Q96PN7	1200 aa		6.13	□□□□□ -1.43
CDH17-205	ENST00000521491	ANO3	Q9BYT9	981 aa		6.13	□□□□□ -1.43
CDH17-205	ENST00000521491	RRAGD	Q9NQL2	400 aa	Predicted RBP	6.13	□□□□□ -1.43
CDH17-205	ENST00000521491	RNF146	Q9NTX7	359 aa		6.13	□□□□□ -1.43

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