RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 TPRNQ4KMQ1 711 aa8.6□□□□□ -1.03
CTNNA1-227ENST00000521387 ANKRD45Q5TZF3 282 aa8.6□□□□□ -1.03
CTNNA1-227ENST00000521387 PLPP4Q5VZY2 271 aa8.6□□□□□ -1.03
CTNNA1-227ENST00000521387 KIAA1841Q6NSI8 718 aa8.6□□□□□ -1.03
CTNNA1-227ENST00000521387 TSSK4Q6SA08 328 aa8.6□□□□□ -1.03
CTNNA1-227ENST00000521387 C16orf86Q6ZW13 317 aa8.6□□□□□ -1.03
CTNNA1-227ENST00000521387 PJA1Q8NG27 643 aa8.6□□□□□ -1.03
CTNNA1-227ENST00000521387 ADAM33Q9BZ11 813 aa8.6□□□□□ -1.03
CTNNA1-227ENST00000521387 NYAP2Q9P242 653 aa8.6□□□□□ -1.03
CTNNA1-227ENST00000521387 GPSM3Q9Y4H4 160 aa8.6□□□□□ -1.03
CTNNA1-227ENST00000521387 HCFC2Q9Y5Z7 792 aa8.6□□□□□ -1.03
CTNNA1-227ENST00000521387 GREB1LQ9C091 1923 aaPredicted RBP8.59□□□□□ -1.03
CTNNA1-227ENST00000521387 LOC102724159A0A0B4J2E5 919 aa8.59□□□□□ -1.03
CTNNA1-227ENST00000521387 PRKAB2O43741 272 aa8.59□□□□□ -1.03
CTNNA1-227ENST00000521387 N4BP1O75113 896 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-227ENST00000521387 FGF18O76093 207 aa8.59□□□□□ -1.03
CTNNA1-227ENST00000521387 SRGAP2BP0DMP2 458 aa8.59□□□□□ -1.03
CTNNA1-227ENST00000521387 PWP2Q15269 919 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-227ENST00000521387 CSRP2Q16527 193 aa8.59□□□□□ -1.03
CTNNA1-227ENST00000521387 FAM26DQ5JW98 314 aa8.59□□□□□ -1.03
CTNNA1-227ENST00000521387 TTC39AQ5SRH9 613 aa8.59□□□□□ -1.03
CTNNA1-227ENST00000521387 RARS2Q5T160 578 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-227ENST00000521387 C12orf60Q5U649 245 aa8.59□□□□□ -1.03
CTNNA1-227ENST00000521387 GPR152Q8TDT2 470 aa8.59□□□□□ -1.03
CTNNA1-227ENST00000521387 CASP10Q92851 521 aa8.59□□□□□ -1.03
CTNNA1-227ENST00000521387 ZNF512BQ96KM6 892 aaPredicted RBP8.59□□□□□ -1.03
CTNNA1-227ENST00000521387 EHMT1Q9H9B1 1298 aa8.59□□□□□ -1.03
CTNNA1-227ENST00000521387 SPATA6Q9NWH7 488 aaPredicted RBP8.59□□□□□ -1.03
CTNNA1-227ENST00000521387 DBR1Q9UK59 544 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-227ENST00000521387 MTF2Q9Y483 593 aaPredicted RBP8.59□□□□□ -1.03
CTNNA1-227ENST00000521387 CFAP46Q8IYW2 2715 aa8.59□□□□□ -1.03
CTNNA1-227ENST00000521387 DENND4AQ7Z401 1863 aa8.58□□□□□ -1.04
CTNNA1-227ENST00000521387 IGKV6D-41A0A0C4DH26 115 aa8.58□□□□□ -1.04
CTNNA1-227ENST00000521387 MAGEB6P1A0A0J9YX57 407 aa8.58□□□□□ -1.04
CTNNA1-227ENST00000521387 NFIBO00712 420 aa8.58□□□□□ -1.04
CTNNA1-227ENST00000521387 LAMTOR5O43504 91 aa8.58□□□□□ -1.04
CTNNA1-227ENST00000521387 LRP3O75074 770 aa8.58□□□□□ -1.04
CTNNA1-227ENST00000521387 CHRNA1P02708 482 aa8.58□□□□□ -1.04
CTNNA1-227ENST00000521387 CAPNS1P04632 268 aa8.58□□□□□ -1.04
CTNNA1-227ENST00000521387 RETP07949 1114 aa8.58□□□□□ -1.04
CTNNA1-227ENST00000521387 UBTFL1P0CB47 393 aaPredicted RBP8.58□□□□□ -1.04
CTNNA1-227ENST00000521387 LIMK1P53667 647 aa8.58□□□□□ -1.04
CTNNA1-227ENST00000521387 DGKDQ16760 1214 aa8.58□□□□□ -1.04
CTNNA1-227ENST00000521387 ATAT1Q5SQI0 421 aa8.58□□□□□ -1.04
CTNNA1-227ENST00000521387 IL31Q6EBC2 164 aa8.58□□□□□ -1.04
CTNNA1-227ENST00000521387 PDE12Q6L8Q7 609 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-227ENST00000521387 SLC30A10Q6XR72 485 aa8.58□□□□□ -1.04
CTNNA1-227ENST00000521387 CHST3Q7LGC8 479 aa8.58□□□□□ -1.04
CTNNA1-227ENST00000521387 LCORLQ8N3X6 602 aa8.58□□□□□ -1.04
CTNNA1-227ENST00000521387 SLC44A3Q8N4M1 653 aa8.58□□□□□ -1.04
CTNNA1-227ENST00000521387 MEIS3Q99687 375 aa8.58□□□□□ -1.04
CTNNA1-227ENST00000521387 DCTPP1Q9H773 170 aa8.58□□□□□ -1.04
CTNNA1-227ENST00000521387 ADD3Q9UEY8 706 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-227ENST00000521387 PIEZO2Q9H5I5 2752 aa8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 SDK1Q7Z5N4 2213 aa8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 MYH8P13535 1937 aa8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 TMEM232C9JQI7 657 aa8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 GIPC1O14908 333 aa8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 CLASP2O75122 1294 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 GH1P01241 217 aa8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 FDX1P10109 184 aa8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 GHRP10912 638 aa8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 TDGF1P13385 188 aa8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 RFX1P22670 979 aa8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 STARD6P59095 220 aa8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 FOXC1Q12948 553 aa8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 NBR1Q14596 966 aa8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 LPIN1Q14693 890 aa8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 LAIR1Q6GTX8 287 aa8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 XRRA1Q6P2D8 792 aa8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 CEP85Q6P2H3 762 aa8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 RASGRP2Q7LDG7 609 aa8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 RPAP2Q8IXW5 612 aaPredicted RBP8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 DHX37Q8IY37 1157 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 ATP6V0A1Q93050 837 aa8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 MKL1Q969V6 931 aa8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 TBC1D32Q96NH3 1257 aa8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 LSM14BQ9BX40 385 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 CRNKL1Q9BZJ0 848 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 ARHGEF3Q9NR81 526 aa8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 TMEM260Q9NX78 707 aa8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 IGSF9Q9P2J2 1179 aa8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 CLIP2Q9UDT6 1046 aa8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 ANKRD17O75179 2603 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 PATJQ8NI35 1801 aa8.57□□□□□ -1.04
CTNNA1-227ENST00000521387 CAND2O75155 1236 aa8.56□□□□□ -1.04
CTNNA1-227ENST00000521387 C1QL1O75973 258 aa8.56□□□□□ -1.04
CTNNA1-227ENST00000521387 PRB1P04280 392 aa8.56□□□□□ -1.04
CTNNA1-227ENST00000521387 SRFP11831 508 aa8.56□□□□□ -1.04
CTNNA1-227ENST00000521387 BMP3P12645 472 aa8.56□□□□□ -1.04
CTNNA1-227ENST00000521387 ATP8B2P98198 1209 aa8.56□□□□□ -1.04
CTNNA1-227ENST00000521387 PDE4DQ08499 809 aa8.56□□□□□ -1.04
CTNNA1-227ENST00000521387 COL28A1Q2UY09 1125 aa8.56□□□□□ -1.04
CTNNA1-227ENST00000521387 PSAPL1Q6NUJ1 521 aa8.56□□□□□ -1.04
CTNNA1-227ENST00000521387 OTOP3Q7RTS5 596 aa8.56□□□□□ -1.04
CTNNA1-227ENST00000521387 GLIS3Q8NEA6 775 aa8.56□□□□□ -1.04
CTNNA1-227ENST00000521387 CLEC4DQ8WXI8 215 aa8.56□□□□□ -1.04
CTNNA1-227ENST00000521387 TCF25Q9BQ70 676 aa8.56□□□□□ -1.04
CTNNA1-227ENST00000521387 C16orf70Q9BSU1 422 aa8.56□□□□□ -1.04
CTNNA1-227ENST00000521387 KATNAL1Q9BW62 490 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms