RNA–Protein interactions for RNA: ENST00000520592.1

CDKL3-204, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 3

Gene CDKL3, Length 652 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-204ENST00000520592 DEF6Q9H4E7 631 aa4.45□□□□□ -1.7
CDKL3-204ENST00000520592 SMURF1Q9HCE7 757 aa4.45□□□□□ -1.7
CDKL3-204ENST00000520592 TRIM39Q9HCM9 518 aa4.45□□□□□ -1.7
CDKL3-204ENST00000520592 ARHGAP20Q9P2F6 1191 aa4.45□□□□□ -1.7
CDKL3-204ENST00000520592 ARHGAP28Q9P2N2 729 aa4.45□□□□□ -1.7
CDKL3-204ENST00000520592 ZFP69BQ9UJL9 534 aa4.45□□□□□ -1.7
CDKL3-204ENST00000520592 TNPO3Q9Y5L0 923 aaKnown RBP4.45□□□□□ -1.7
CDKL3-204ENST00000520592 HS3ST3A1Q9Y663 406 aa4.45□□□□□ -1.7
CDKL3-204ENST00000520592 CCDC163A0A0D9SF12 145 aa4.44□□□□□ -1.7
CDKL3-204ENST00000520592 ZNF561-AS1K7EIQ3 104 aa4.44□□□□□ -1.7
CDKL3-204ENST00000520592 PLD2O14939 933 aa4.44□□□□□ -1.7
CDKL3-204ENST00000520592 KCNA6P17658 529 aa4.44□□□□□ -1.7
CDKL3-204ENST00000520592 SDSP20132 328 aa4.44□□□□□ -1.7
CDKL3-204ENST00000520592 EPHA5P54756 1037 aa4.44□□□□□ -1.7
CDKL3-204ENST00000520592 TMEM132BQ14DG7 1078 aa4.44□□□□□ -1.7
CDKL3-204ENST00000520592 SEC23AQ15436 765 aa4.44□□□□□ -1.7
CDKL3-204ENST00000520592 TM4SF20Q53R12 229 aa4.44□□□□□ -1.7
CDKL3-204ENST00000520592 FAM26FQ5R3K3 315 aa4.44□□□□□ -1.7
CDKL3-204ENST00000520592 PKN3Q6P5Z2 889 aa4.44□□□□□ -1.7
CDKL3-204ENST00000520592 C2orf69Q8N8R5 385 aa4.44□□□□□ -1.7
CDKL3-204ENST00000520592 TTLL11Q8NHH1 800 aa4.44□□□□□ -1.7
CDKL3-204ENST00000520592 ZCCHC14Q8WYQ9 949 aaKnown RBP4.44□□□□□ -1.7
CDKL3-204ENST00000520592 FANCLQ9NW38 375 aa4.44□□□□□ -1.7
CDKL3-204ENST00000520592 UCKL1Q9NWZ5 548 aa4.44□□□□□ -1.7
CDKL3-204ENST00000520592 C11orf21Q9P2W6 132 aa4.44□□□□□ -1.7
CDKL3-204ENST00000520592 CD2APQ9Y5K6 639 aa4.44□□□□□ -1.7
CDKL3-204ENST00000520592 MRPL42Q9Y6G3 142 aaKnown RBP4.44□□□□□ -1.7
CDKL3-204ENST00000520592 M0R2C6 588 aa4.43□□□□□ -1.7
CDKL3-204ENST00000520592 WNT9AO14904 365 aa4.43□□□□□ -1.7
CDKL3-204ENST00000520592 MMEP08473 750 aa4.43□□□□□ -1.7
CDKL3-204ENST00000520592 MC4RP32245 332 aa4.43□□□□□ -1.7
CDKL3-204ENST00000520592 DBPQ10586 325 aaPredicted RBP4.43□□□□□ -1.7
CDKL3-204ENST00000520592 TRIM61Q5EBN2 209 aa4.43□□□□□ -1.7
CDKL3-204ENST00000520592 PRR31Q5SQ13 230 aa4.43□□□□□ -1.7
CDKL3-204ENST00000520592 OVCH1Q7RTY7 1134 aa4.43□□□□□ -1.7
CDKL3-204ENST00000520592 PLEKHH3Q7Z736 793 aa4.43□□□□□ -1.7
CDKL3-204ENST00000520592 DTX3Q8N9I9 347 aa4.43□□□□□ -1.7
CDKL3-204ENST00000520592 NUDT10Q8NFP7 164 aa4.43□□□□□ -1.7
CDKL3-204ENST00000520592 NUDT11Q96G61 164 aa4.43□□□□□ -1.7
CDKL3-204ENST00000520592 CDK5RAP1Q96SZ6 601 aaKnown RBP4.43□□□□□ -1.7
CDKL3-204ENST00000520592 TMEM168Q9H0V1 697 aa4.43□□□□□ -1.7
CDKL3-204ENST00000520592 CD248Q9HCU0 757 aa4.43□□□□□ -1.7
CDKL3-204ENST00000520592 DLL4Q9NR61 685 aa4.43□□□□□ -1.7
CDKL3-204ENST00000520592 SAMD15Q9P1V8 674 aa4.43□□□□□ -1.7
CDKL3-204ENST00000520592 FTSJ1Q9UET6 329 aa4.43□□□□□ -1.7
CDKL3-204ENST00000520592 ZNF839A8K0R7 811 aa4.42□□□□□ -1.7
CDKL3-204ENST00000520592 LAMTOR5O43504 91 aa4.42□□□□□ -1.7
CDKL3-204ENST00000520592 B4GALT4O60513 344 aa4.42□□□□□ -1.7
CDKL3-204ENST00000520592 DNAJC8O75937 253 aaPredicted RBP4.42□□□□□ -1.7
CDKL3-204ENST00000520592 GLRX3O76003 335 aaKnown RBP4.42□□□□□ -1.7
CDKL3-204ENST00000520592 IL18BPO95998 194 aa4.42□□□□□ -1.7
CDKL3-204ENST00000520592 JMJD7P0C870 316 aa4.42□□□□□ -1.7
CDKL3-204ENST00000520592 ZNF28P17035 718 aa4.42□□□□□ -1.7
CDKL3-204ENST00000520592 ADCY8P40145 1251 aa4.42□□□□□ -1.7
CDKL3-204ENST00000520592 LACTBP83111 547 aaPredicted RBP4.42□□□□□ -1.7
CDKL3-204ENST00000520592 PURAQ00577 322 aaKnown RBP4.42□□□□□ -1.7
CDKL3-204ENST00000520592 PABPC4Q13310 644 aaKnown RBP eCLIP4.42□□□□□ -1.7
CDKL3-204ENST00000520592 SMN1Q16637 294 aaKnown RBP4.42□□□□□ -1.7
CDKL3-204ENST00000520592 TKFCQ3LXA3 575 aa4.42□□□□□ -1.7
CDKL3-204ENST00000520592 TMEM177Q53S58 311 aa4.42□□□□□ -1.7
CDKL3-204ENST00000520592 FIGNQ5HY92 759 aa4.42□□□□□ -1.7
CDKL3-204ENST00000520592 PIK3R6Q5UE93 754 aa4.42□□□□□ -1.7
CDKL3-204ENST00000520592 ZNF585AQ6P3V2 769 aa4.42□□□□□ -1.7
CDKL3-204ENST00000520592 GPR155Q7Z3F1 870 aa4.42□□□□□ -1.7
CDKL3-204ENST00000520592 DDX53Q86TM3 631 aaKnown RBP4.42□□□□□ -1.7
CDKL3-204ENST00000520592 IGDCC4Q8TDY8 1250 aa4.42□□□□□ -1.7
CDKL3-204ENST00000520592 CELF4Q9BZC1 486 aaKnown RBP4.42□□□□□ -1.7
CDKL3-204ENST00000520592 KLC2Q9H0B6 622 aa4.42□□□□□ -1.7
CDKL3-204ENST00000520592 SLC12A8A0AV02 714 aa4.41□□□□□ -1.7
CDKL3-204ENST00000520592 PRAMEF22A3QJZ6 481 aa4.41□□□□□ -1.7
CDKL3-204ENST00000520592 CYP7B1O75881 506 aa4.41□□□□□ -1.7
CDKL3-204ENST00000520592 C4BPAP04003 597 aaKnown RBP4.41□□□□□ -1.7
CDKL3-204ENST00000520592 IGFALSP35858 605 aa4.41□□□□□ -1.7
CDKL3-204ENST00000520592 IRF9Q00978 393 aa4.41□□□□□ -1.7
CDKL3-204ENST00000520592 ICAM4Q14773 271 aa4.41□□□□□ -1.7
CDKL3-204ENST00000520592 SMAD2Q15796 467 aaKnown RBP4.41□□□□□ -1.7
CDKL3-204ENST00000520592 CNNM4Q6P4Q7 775 aa4.41□□□□□ -1.7
CDKL3-204ENST00000520592 LRSAM1Q6UWE0 723 aa4.41□□□□□ -1.7
CDKL3-204ENST00000520592 ARHGEF18Q6ZSZ5 1173 aa4.41□□□□□ -1.7
CDKL3-204ENST00000520592 JAZF1Q86VZ6 243 aa4.41□□□□□ -1.7
CDKL3-204ENST00000520592 CIR1Q86X95 450 aaPredicted RBP4.41□□□□□ -1.7
CDKL3-204ENST00000520592 HOMER1Q86YM7 354 aa4.41□□□□□ -1.7
CDKL3-204ENST00000520592 NOSTRINQ8IVI9 506 aa4.41□□□□□ -1.7
CDKL3-204ENST00000520592 PALM2Q8IXS6 379 aa4.41□□□□□ -1.7
CDKL3-204ENST00000520592 DHX37Q8IY37 1157 aaKnown RBP4.41□□□□□ -1.7
CDKL3-204ENST00000520592 HIPK4Q8NE63 616 aa4.41□□□□□ -1.7
CDKL3-204ENST00000520592 WNK4Q96J92 1243 aa4.41□□□□□ -1.7
CDKL3-204ENST00000520592 YTHDC1Q96MU7 727 aaKnown RBP4.41□□□□□ -1.7
CDKL3-204ENST00000520592 TMEM260Q9NX78 707 aa4.41□□□□□ -1.7
CDKL3-204ENST00000520592 KCNQ2O43526 872 aa4.4□□□□□ -1.71
CDKL3-204ENST00000520592 KPNA6O60684 536 aa4.4□□□□□ -1.71
CDKL3-204ENST00000520592 CLASP2O75122 1294 aaKnown RBP4.4□□□□□ -1.71
CDKL3-204ENST00000520592 HIP1RO75146 1068 aa4.4□□□□□ -1.71
CDKL3-204ENST00000520592 COL6A1P12109 1028 aa4.4□□□□□ -1.71
CDKL3-204ENST00000520592 PTGS1P23219 599 aa4.4□□□□□ -1.71
CDKL3-204ENST00000520592 NEK4P51957 841 aa4.4□□□□□ -1.71
CDKL3-204ENST00000520592 RRADP55042 308 aa4.4□□□□□ -1.71
CDKL3-204ENST00000520592 TGFB2P61812 414 aa4.4□□□□□ -1.71
CDKL3-204ENST00000520592 NFATC3Q12968 1075 aa4.4□□□□□ -1.71
CDKL3-204ENST00000520592 WDR72Q3MJ13 1102 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms