RNA–Protein interactions for RNA: ENST00000520532.5

TRAPPC9-207, Transcript of trafficking protein particle complex 9, humanhuman

TSL 5

Gene TRAPPC9, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-207ENST00000520532 COL4A4P53420 1690 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 SMIM35A0A1B0GVV1 85 aa8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 DDX39AO00148 427 aaKnown RBP8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 SORBS3O60504 671 aa8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 OATP04181 439 aa8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 IQCF3P0C7M6 154 aa8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 CYP2C9P11712 490 aa8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 ACTN1P12814 892 aa8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 CSF2RAP15509 400 aa8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 GJB2P29033 226 aa8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 CYP2C18P33260 490 aa8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 SMAD3P84022 425 aaKnown RBP8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 PRKCEQ02156 737 aa8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 PLCB4Q15147 1175 aa8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 CALCRLQ16602 461 aa8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 ZNF484Q5JVG2 852 aa8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 FAM26DQ5JW98 314 aa8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 PDXDC2PQ6P474 469 aa8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 MIER3Q7Z3K6 550 aa8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 BRAPQ7Z569 592 aa8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 EXOC8Q8IYI6 725 aa8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 USP38Q8NB14 1042 aa8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 HERVK_113Q902F9 699 aa8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 APBB2Q92870 758 aa8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 RNPC3Q96LT9 517 aaKnown RBP8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 UNC45AQ9H3U1 944 aa8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 TET1Q8NFU7 2136 aa8.35□□□□□ -1.07
TRAPPC9-207ENST00000520532 NLRC5Q86WI3 1866 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 EVPLQ92817 2033 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 FAM205CA6NFA0 338 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 MAGEB2O15479 319 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 TREHO43280 583 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 GAS2O43903 313 aaKnown RBP8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 LYPLA2O95372 231 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 BMP15O95972 392 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 OR52Z1P0C646 297 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 INSRRP14616 1297 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 MUTP22033 750 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 MARK3P27448 753 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 PRPHP41219 470 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 FXR1P51114 621 aaKnown RBP eCLIP8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 PSMC5P62195 406 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 XKR3Q5GH77 459 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 EARS2Q5JPH6 523 aaKnown RBP8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 TTC38Q5R3I4 469 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 TMEM240Q5SV17 173 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 MARCH8Q5T0T0 291 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 HAUS3Q68CZ6 603 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 CNKSR3Q6P9H4 555 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 TRAF7Q6Q0C0 670 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 HSCBQ8IWL3 235 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 NME8Q8N427 588 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 KCTD17Q8N5Z5 321 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 HAS1Q92839 578 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 MTMR9Q96QG7 549 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 SLC9A7Q96T83 725 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 JPH2Q9BR39 696 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 RAB34Q9BZG1 259 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 SETD4Q9NVD3 440 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 PCDHA12Q9UN75 941 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 TELO2Q9Y4R8 837 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 PCDHA2Q9Y5H9 948 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 STK24Q9Y6E0 443 aa8.34□□□□□ -1.07
TRAPPC9-207ENST00000520532 RSPH10B2B2RC85 870 aa8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 ZBTB42B2RXF5 422 aa8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 H3BQV1 296 aa8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 M0QZ92 97 aa8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 CHMP2AO43633 222 aa8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 C22orf31O95567 290 aa8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 FGBP02675 491 aa8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 P4HBP07237 508 aaKnown RBP8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 RSPH10BP0C881 870 aa8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 THPOP40225 353 aa8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 QARSP47897 775 aaKnown RBP8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 FXR2P51116 673 aaKnown RBP eCLIP8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 CCL23P55773 120 aa8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 CHMP4BP1P59074 171 aa8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 MRPS6P82932 125 aaKnown RBP8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 CDC42EP1Q00587 391 aa8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 MGAT3Q09327 533 aa8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 HIC1Q14526 733 aa8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 EPHA7Q15375 998 aa8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 SHHQ15465 462 aa8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 TMEM266Q2M3C6 531 aa8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 ODR4Q5SWX8 454 aa8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 IER5Q5VY09 327 aa8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 FAM109BQ6ICB4 259 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 SWSAP1Q6NVH7 229 aa8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 MTHFD1LQ6UB35 978 aa8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 C4orf19Q8IY42 314 aa8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 CKAP2LQ8IYA6 745 aa8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 PHOSPHO2Q8TCD6 241 aa8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 NIFKQ9BYG3 293 aaKnown RBP8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 TTC12Q9H892 705 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 GABBR1Q9UBS5 961 aa8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 MORC2Q9Y6X9 1032 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC9-207ENST00000520532 ABHD14A-ACY1A0A1B0GW23 586 aa8.32□□□□□ -1.08
TRAPPC9-207ENST00000520532 KIF28PB7ZC32 967 aa8.32□□□□□ -1.08
TRAPPC9-207ENST00000520532 SLC26A4O43511 780 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms