RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 COL9A3Q14050 684 aaPredicted RBP10.7□□□□□ -0.7
CTNNA1-221ENST00000520339 LRRC8DQ7L1W4 858 aa10.7□□□□□ -0.7
CTNNA1-221ENST00000520339 HERC6Q8IVU3 1022 aa10.7□□□□□ -0.7
CTNNA1-221ENST00000520339 CCDC155Q8N6L0 562 aa10.7□□□□□ -0.7
CTNNA1-221ENST00000520339 PIBF1Q8WXW3 757 aa10.7□□□□□ -0.7
CTNNA1-221ENST00000520339 PPM1EQ8WY54 764 aa10.7□□□□□ -0.7
CTNNA1-221ENST00000520339 WNT8BQ93098 351 aa10.7□□□□□ -0.7
CTNNA1-221ENST00000520339 SLC9A7Q96T83 725 aa10.7□□□□□ -0.7
CTNNA1-221ENST00000520339 C16orf70Q9BSU1 422 aa10.7□□□□□ -0.7
CTNNA1-221ENST00000520339 SPZ1Q9BXG8 430 aa10.7□□□□□ -0.7
CTNNA1-221ENST00000520339 BCAS3Q9H6U6 928 aa10.7□□□□□ -0.7
CTNNA1-221ENST00000520339 SCN10AQ9Y5Y9 1956 aa10.7□□□□□ -0.7
CTNNA1-221ENST00000520339 CDH23Q9H251 3354 aa10.69□□□□□ -0.7
CTNNA1-221ENST00000520339 SPATA31C2B4DYI2 1134 aa10.69□□□□□ -0.7
CTNNA1-221ENST00000520339 SH2B2O14492 632 aaPredicted RBP10.69□□□□□ -0.7
CTNNA1-221ENST00000520339 SLC27A2O14975 620 aa10.69□□□□□ -0.7
CTNNA1-221ENST00000520339 PRC1O43663 620 aa10.69□□□□□ -0.7
CTNNA1-221ENST00000520339 SORBS3O60504 671 aa10.69□□□□□ -0.7
CTNNA1-221ENST00000520339 ARHGEF15O94989 841 aa10.69□□□□□ -0.7
CTNNA1-221ENST00000520339 CD2BP2O95400 341 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-221ENST00000520339 PARNO95453 639 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-221ENST00000520339 CA3P07451 260 aa10.69□□□□□ -0.7
CTNNA1-221ENST00000520339 KIF5BP33176 963 aa10.69□□□□□ -0.7
CTNNA1-221ENST00000520339 RPIAP49247 311 aa10.69□□□□□ -0.7
CTNNA1-221ENST00000520339 GNAQP50148 359 aa10.69□□□□□ -0.7
CTNNA1-221ENST00000520339 USP4Q13107 963 aa10.69□□□□□ -0.7
CTNNA1-221ENST00000520339 TCTN1Q2MV58 587 aa10.69□□□□□ -0.7
CTNNA1-221ENST00000520339 VASH1Q7L8A9 365 aaPredicted RBP10.69□□□□□ -0.7
CTNNA1-221ENST00000520339 ZNF654Q8IZM8 581 aa10.69□□□□□ -0.7
CTNNA1-221ENST00000520339 TMTC2Q8N394 836 aa10.69□□□□□ -0.7
CTNNA1-221ENST00000520339 SRBD1Q8N5C6 995 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-221ENST00000520339 CTCFLQ8NI51 663 aaPredicted RBP10.69□□□□□ -0.7
CTNNA1-221ENST00000520339 INPP4AQ96PE3 977 aaPredicted RBP10.69□□□□□ -0.7
CTNNA1-221ENST00000520339 LZTS2Q9BRK4 669 aa10.69□□□□□ -0.7
CTNNA1-221ENST00000520339 ESYT1Q9BSJ8 1104 aa10.69□□□□□ -0.7
CTNNA1-221ENST00000520339 MYL10Q9BUA6 226 aa10.69□□□□□ -0.7
CTNNA1-221ENST00000520339 MLXIPQ9HAP2 919 aa10.69□□□□□ -0.7
CTNNA1-221ENST00000520339 EPOPA6NHQ4 379 aa10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 KIF28PB7ZC32 967 aa10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 RFXAPO00287 272 aa10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 MEIS2O14770 477 aa10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 STAM2O75886 525 aa10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 PLEKHA8P1O95397 391 aa10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 POU3F3P20264 500 aaPredicted RBP10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 MCM5P33992 734 aa10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 LIFRP42702 1097 aa10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 TAP1Q03518 808 aa10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 MBTPS1Q14703 1052 aa10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 ARID5BQ14865 1188 aa10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 NECTIN1Q15223 517 aa10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 CCDC85BQ15834 202 aaPredicted RBP10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 TMCO4Q5TGY1 634 aa10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 ERICH6BQ5W0A0 696 aa10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 CREB3L3Q68CJ9 461 aa10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 XRRA1Q6P2D8 792 aa10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 CNKSR3Q6P9H4 555 aa10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 USP17L6PQ6QN14 398 aa10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 CASC1Q6TDU7 716 aa10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 METTL7BQ6UX53 244 aa10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 EHBP1Q8NDI1 1231 aa10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 ATXN2LQ8WWM7 1075 aaKnown RBP10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 RRP36Q96EU6 259 aaKnown RBP10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 TMEM87BQ96K49 555 aa10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 RTEL1Q9NZ71 1219 aa10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 RBM19Q9Y4C8 960 aaKnown RBP10.68□□□□□ -0.7
CTNNA1-221ENST00000520339 ABHD14A-ACY1A0A1B0GW23 586 aa10.67□□□□□ -0.7
CTNNA1-221ENST00000520339 RBAK-RBAKDNI3L0D1 243 aa10.67□□□□□ -0.7
CTNNA1-221ENST00000520339 FIBPO43427 364 aa10.67□□□□□ -0.7
CTNNA1-221ENST00000520339 HOXC8P31273 242 aa10.67□□□□□ -0.7
CTNNA1-221ENST00000520339 WDR5P61964 334 aaKnown RBP10.67□□□□□ -0.7
CTNNA1-221ENST00000520339 NEDD9Q14511 834 aa10.67□□□□□ -0.7
CTNNA1-221ENST00000520339 GNPTABQ3T906 1256 aa10.67□□□□□ -0.7
CTNNA1-221ENST00000520339 ZNF618Q5T7W0 954 aa10.67□□□□□ -0.7
CTNNA1-221ENST00000520339 SERINC5Q86VE9 423 aa10.67□□□□□ -0.7
CTNNA1-221ENST00000520339 ASB2Q96Q27 587 aa10.67□□□□□ -0.7
CTNNA1-221ENST00000520339 GPR20Q99678 358 aa10.67□□□□□ -0.7
CTNNA1-221ENST00000520339 SENP7Q9BQF6 1050 aa10.67□□□□□ -0.7
CTNNA1-221ENST00000520339 CERS4Q9HA82 394 aa10.67□□□□□ -0.7
CTNNA1-221ENST00000520339 KIAA1024Q9UPX6 916 aa10.67□□□□□ -0.7
CTNNA1-221ENST00000520339 MTCH2Q9Y6C9 303 aa10.67□□□□□ -0.7
CTNNA1-221ENST00000520339 C17orf102A2RUQ5 167 aa10.66□□□□□ -0.7
CTNNA1-221ENST00000520339 CCDC69A6NI79 296 aa10.66□□□□□ -0.7
CTNNA1-221ENST00000520339 H3BRB1 525 aa10.66□□□□□ -0.7
CTNNA1-221ENST00000520339 LGALS2P05162 132 aa10.66□□□□□ -0.7
CTNNA1-221ENST00000520339 SMIM10L2AP0DMW4 78 aa10.66□□□□□ -0.7
CTNNA1-221ENST00000520339 SMIM10L2BP0DMW5 78 aa10.66□□□□□ -0.7
CTNNA1-221ENST00000520339 RXRAP19793 462 aa10.66□□□□□ -0.7
CTNNA1-221ENST00000520339 KCNJ6P48051 423 aa10.66□□□□□ -0.7
CTNNA1-221ENST00000520339 DEFB103AP81534 67 aa10.66□□□□□ -0.7
CTNNA1-221ENST00000520339 MRPS5P82675 430 aaKnown RBP10.66□□□□□ -0.7
CTNNA1-221ENST00000520339 PCNX4Q63HM2 1172 aa10.66□□□□□ -0.7
CTNNA1-221ENST00000520339 NFXL1Q6ZNB6 911 aa10.66□□□□□ -0.7
CTNNA1-221ENST00000520339 CYFIP1Q7L576 1253 aa10.66□□□□□ -0.7
CTNNA1-221ENST00000520339 TMCO2Q7Z6W1 182 aaPredicted RBP10.66□□□□□ -0.7
CTNNA1-221ENST00000520339 SGMS1Q86VZ5 419 aa10.66□□□□□ -0.7
CTNNA1-221ENST00000520339 CMTR1Q8N1G2 835 aaKnown RBP10.66□□□□□ -0.7
CTNNA1-221ENST00000520339 SMARCC2Q8TAQ2 1214 aa10.66□□□□□ -0.7
CTNNA1-221ENST00000520339 CUL5Q93034 780 aa10.66□□□□□ -0.7
CTNNA1-221ENST00000520339 USP26Q9BXU7 913 aa10.66□□□□□ -0.7
CTNNA1-221ENST00000520339 RNPEPQ9H4A4 650 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms