RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 ARMCX3Q9UH62 379 aaPredicted RBP28.32■■■□□ 2.12
COL13A1-213ENST00000520267 CCPG1Q9ULG6 757 aa28.32■■■□□ 2.12
COL13A1-213ENST00000520267 MYH10P35580 1976 aa28.31■■■□□ 2.12
COL13A1-213ENST00000520267 GAP43P17677 238 aa28.31■■■□□ 2.12
COL13A1-213ENST00000520267 LONRF2Q1L5Z9 754 aa28.31■■■□□ 2.12
COL13A1-213ENST00000520267 SLC9C1Q4G0N8 1177 aa28.31■■■□□ 2.12
COL13A1-213ENST00000520267 FUT8Q9BYC5 575 aa28.31■■■□□ 2.12
COL13A1-213ENST00000520267 FER1L6Q2WGJ9 1857 aa28.31■■■□□ 2.12
COL13A1-213ENST00000520267 FAM13AO94988 1023 aa28.31■■■□□ 2.12
COL13A1-213ENST00000520267 NR3C1P04150 777 aa28.31■■■□□ 2.12
COL13A1-213ENST00000520267 SERPING1P05155 500 aa28.31■■■□□ 2.12
COL13A1-213ENST00000520267 ICAM1P05362 532 aa28.31■■■□□ 2.12
COL13A1-213ENST00000520267 DEFB129Q9H1M3 183 aa28.31■■■□□ 2.12
COL13A1-213ENST00000520267 PIM2Q9P1W9 311 aa28.31■■■□□ 2.12
COL13A1-213ENST00000520267 NMT1P30419 496 aaKnown RBP28.3■■■□□ 2.12
COL13A1-213ENST00000520267 HSD17B4P51659 736 aa28.3■■■□□ 2.12
COL13A1-213ENST00000520267 MYCT1Q8N699 235 aa28.3■■■□□ 2.12
COL13A1-213ENST00000520267 TRIM58Q8NG06 486 aa28.3■■■□□ 2.12
COL13A1-213ENST00000520267 WDR11Q9BZH6 1224 aa28.3■■■□□ 2.12
COL13A1-213ENST00000520267 IKZF4Q9H2S9 585 aa28.3■■■□□ 2.12
COL13A1-213ENST00000520267 COL20A1Q9P218 1284 aa28.3■■■□□ 2.12
COL13A1-213ENST00000520267 ZNF185O15231 689 aa28.3■■■□□ 2.12
COL13A1-213ENST00000520267 CLIC2O15247 247 aa28.3■■■□□ 2.12
COL13A1-213ENST00000520267 PJA2O43164 708 aa28.3■■■□□ 2.12
COL13A1-213ENST00000520267 TACC1O75410 805 aa28.3■■■□□ 2.12
COL13A1-213ENST00000520267 EGFRP00533 1210 aa28.3■■■□□ 2.12
COL13A1-213ENST00000520267 BAG6P46379 1132 aa28.3■■■□□ 2.12
COL13A1-213ENST00000520267 CASP4P49662 377 aa28.3■■■□□ 2.12
COL13A1-213ENST00000520267 SETQ01105 290 aaPredicted RBP28.3■■■□□ 2.12
COL13A1-213ENST00000520267 GABPB1Q06547 395 aaPredicted RBP28.3■■■□□ 2.12
COL13A1-213ENST00000520267 DPY19L2P1Q6NXN4 242 aa28.3■■■□□ 2.12
COL13A1-213ENST00000520267 B3GNT9Q6UX72 402 aa28.3■■■□□ 2.12
COL13A1-213ENST00000520267 MXRA8Q9BRK3 442 aa28.3■■■□□ 2.12
COL13A1-213ENST00000520267 SALL4Q9UJQ4 1053 aa28.3■■■□□ 2.12
COL13A1-213ENST00000520267 ACTN1P12814 892 aa28.29■■■□□ 2.12
COL13A1-213ENST00000520267 DMTNQ08495 405 aa28.29■■■□□ 2.12
COL13A1-213ENST00000520267 DGKZQ13574 1117 aa28.29■■■□□ 2.12
COL13A1-213ENST00000520267 RAPGEF1Q13905 1077 aa28.29■■■□□ 2.12
COL13A1-213ENST00000520267 SLC16A10Q8TF71 515 aa28.29■■■□□ 2.12
COL13A1-213ENST00000520267 HNRNPLLQ8WVV9 542 aaKnown RBP28.29■■■□□ 2.12
COL13A1-213ENST00000520267 TEKT3Q9BXF9 490 aa28.29■■■□□ 2.12
COL13A1-213ENST00000520267 JADE2Q9NQC1 790 aa28.29■■■□□ 2.12
COL13A1-213ENST00000520267 RBAK-RBAKDNI3L0D1 243 aa28.29■■■□□ 2.12
COL13A1-213ENST00000520267 NFIBO00712 420 aa28.29■■■□□ 2.12
COL13A1-213ENST00000520267 TGFB1I1O43294 461 aa28.29■■■□□ 2.12
COL13A1-213ENST00000520267 AFPP02771 609 aaKnown RBP28.29■■■□□ 2.12
COL13A1-213ENST00000520267 SLC9A1P19634 815 aa28.29■■■□□ 2.12
COL13A1-213ENST00000520267 VSNL1P62760 191 aa28.29■■■□□ 2.12
COL13A1-213ENST00000520267 RASSF7Q02833 373 aa28.29■■■□□ 2.12
COL13A1-213ENST00000520267 EPHA7Q15375 998 aa28.29■■■□□ 2.12
COL13A1-213ENST00000520267 ANKRD13CQ8N6S4 541 aa28.29■■■□□ 2.12
COL13A1-213ENST00000520267 TEPSINQ96N21 525 aa28.29■■■□□ 2.12
COL13A1-213ENST00000520267 ZMYM2Q9UBW7 1377 aa28.28■■■□□ 2.12
COL13A1-213ENST00000520267 IPO5O00410 1097 aaKnown RBP28.28■■■□□ 2.12
COL13A1-213ENST00000520267 ITGB5P18084 799 aa28.28■■■□□ 2.12
COL13A1-213ENST00000520267 ZC2HC1CQ53FD0 456 aaPredicted RBP28.28■■■□□ 2.12
COL13A1-213ENST00000520267 CLEC4DQ8WXI8 215 aa28.28■■■□□ 2.12
COL13A1-213ENST00000520267 HOOK2Q96ED9 719 aa28.28■■■□□ 2.12
COL13A1-213ENST00000520267 NACC1Q96RE7 527 aa28.28■■■□□ 2.12
COL13A1-213ENST00000520267 JRKLQ9Y4A0 524 aa28.28■■■□□ 2.12
COL13A1-213ENST00000520267 BEND6Q5SZJ8 279 aaPredicted RBP28.27■■■□□ 2.12
COL13A1-213ENST00000520267 FRMPD4Q14CM0 1322 aa28.27■■■□□ 2.12
COL13A1-213ENST00000520267 EIF3DO15371 548 aaKnown RBP eCLIP28.27■■■□□ 2.12
COL13A1-213ENST00000520267 XRCC5P13010 732 aaKnown RBP28.27■■■□□ 2.12
COL13A1-213ENST00000520267 MUTP22033 750 aa28.27■■■□□ 2.12
COL13A1-213ENST00000520267 RPL13P26373 211 aaKnown RBP28.27■■■□□ 2.12
COL13A1-213ENST00000520267 ARID5AQ03989 594 aa28.27■■■□□ 2.12
COL13A1-213ENST00000520267 SF3B2Q13435 895 aaKnown RBP28.27■■■□□ 2.12
COL13A1-213ENST00000520267 DCAF17Q5H9S7 520 aaPredicted RBP28.27■■■□□ 2.12
COL13A1-213ENST00000520267 FAM133AQ8N9E0 248 aa28.27■■■□□ 2.12
COL13A1-213ENST00000520267 PRPF38AQ8NAV1 312 aaKnown RBP28.27■■■□□ 2.12
COL13A1-213ENST00000520267 DRC1Q96MC2 740 aa28.27■■■□□ 2.12
COL13A1-213ENST00000520267 PARVGQ9HBI0 331 aa28.27■■■□□ 2.12
COL13A1-213ENST00000520267 AIPL1Q9NZN9 384 aa28.27■■■□□ 2.12
COL13A1-213ENST00000520267 DDX39AO00148 427 aaKnown RBP28.26■■■□□ 2.11
COL13A1-213ENST00000520267 PDE2AO00408 941 aaPredicted RBP28.26■■■□□ 2.11
COL13A1-213ENST00000520267 CKAP4Q07065 602 aaKnown RBP28.26■■■□□ 2.11
COL13A1-213ENST00000520267 IL31RAQ8NI17 732 aa28.26■■■□□ 2.11
COL13A1-213ENST00000520267 FIZ1Q96SL8 496 aa28.26■■■□□ 2.11
COL13A1-213ENST00000520267 ABCB6Q9NP58 842 aa28.26■■■□□ 2.11
COL13A1-213ENST00000520267 RPTORQ8N122 1335 aa28.26■■■□□ 2.11
COL13A1-213ENST00000520267 SLC16A3O15427 465 aaKnown RBP28.26■■■□□ 2.11
COL13A1-213ENST00000520267 KSR1Q8IVT5 923 aa28.26■■■□□ 2.11
COL13A1-213ENST00000520267 CPXCR1Q8N123 301 aa28.26■■■□□ 2.11
COL13A1-213ENST00000520267 BANK1Q8NDB2 785 aa28.26■■■□□ 2.11
COL13A1-213ENST00000520267 JDP2Q8WYK2 163 aa28.26■■■□□ 2.11
COL13A1-213ENST00000520267 LXNQ9BS40 222 aa28.26■■■□□ 2.11
COL13A1-213ENST00000520267 UBXN6Q9BZV1 441 aa28.26■■■□□ 2.11
COL13A1-213ENST00000520267 TAOK3Q9H2K8 898 aa28.26■■■□□ 2.11
COL13A1-213ENST00000520267 PKD2L1Q9P0L9 805 aa28.26■■■□□ 2.11
COL13A1-213ENST00000520267 SNX12Q9UMY4 172 aa28.26■■■□□ 2.11
COL13A1-213ENST00000520267 MYH11P35749 1972 aa28.25■■■□□ 2.11
COL13A1-213ENST00000520267 WDR46O15213 610 aaKnown RBP28.25■■■□□ 2.11
COL13A1-213ENST00000520267 EPB41P11171 864 aaKnown RBP28.25■■■□□ 2.11
COL13A1-213ENST00000520267 METTL14Q9HCE5 456 aaKnown RBP28.25■■■□□ 2.11
COL13A1-213ENST00000520267 PLCB1Q9NQ66 1216 aa28.25■■■□□ 2.11
COL13A1-213ENST00000520267 PCDHB13Q9Y5F0 798 aa28.25■■■□□ 2.11
COL13A1-213ENST00000520267 PON1P27169 355 aa28.25■■■□□ 2.11
COL13A1-213ENST00000520267 USP14P54578 494 aa28.25■■■□□ 2.11
COL13A1-213ENST00000520267 ASIC2Q16515 512 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms