RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 ATF2P15336 505 aa4.65□□□□□ -1.67
HMGB1P41-201ENST00000520234 CPEP16870 476 aa4.65□□□□□ -1.67
HMGB1P41-201ENST00000520234 STAT5AP42229 794 aa4.65□□□□□ -1.67
HMGB1P41-201ENST00000520234 FOXO4P98177 505 aa4.65□□□□□ -1.67
HMGB1P41-201ENST00000520234 IRF9Q00978 393 aa4.65□□□□□ -1.67
HMGB1P41-201ENST00000520234 OCRLQ01968 901 aa4.65□□□□□ -1.67
HMGB1P41-201ENST00000520234 GRIN1Q05586 938 aa4.65□□□□□ -1.67
HMGB1P41-201ENST00000520234 ZNF174Q15697 407 aa4.65□□□□□ -1.67
HMGB1P41-201ENST00000520234 CR1LQ2VPA4 569 aa4.65□□□□□ -1.67
HMGB1P41-201ENST00000520234 CT47A1Q5JQC4 288 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P41-201ENST00000520234 CC2D1AQ6P1N0 951 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P41-201ENST00000520234 ZNF662Q6ZS27 426 aa4.65□□□□□ -1.67
HMGB1P41-201ENST00000520234 FILIP1Q7Z7B0 1213 aa4.65□□□□□ -1.67
HMGB1P41-201ENST00000520234 SMARCC2Q8TAQ2 1214 aa4.65□□□□□ -1.67
HMGB1P41-201ENST00000520234 LEO1Q8WVC0 666 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P41-201ENST00000520234 TMEM209Q96SK2 561 aa4.65□□□□□ -1.67
HMGB1P41-201ENST00000520234 ACSS2Q9NR19 701 aa4.65□□□□□ -1.67
HMGB1P41-201ENST00000520234 PLA2G2DQ9UNK4 145 aa4.65□□□□□ -1.67
HMGB1P41-201ENST00000520234 ACOT7O00154 380 aa4.64□□□□□ -1.67
HMGB1P41-201ENST00000520234 SCDO00767 359 aa4.64□□□□□ -1.67
HMGB1P41-201ENST00000520234 C4BPAP04003 597 aaKnown RBP4.64□□□□□ -1.67
HMGB1P41-201ENST00000520234 ENO2P09104 434 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P41-201ENST00000520234 NCLP19338 710 aaKnown RBP4.64□□□□□ -1.67
HMGB1P41-201ENST00000520234 SDHAP31040 664 aa4.64□□□□□ -1.67
HMGB1P41-201ENST00000520234 MC3RP41968 323 aa4.64□□□□□ -1.67
HMGB1P41-201ENST00000520234 CAP1Q01518 475 aa4.64□□□□□ -1.67
HMGB1P41-201ENST00000520234 DSG1Q02413 1049 aa4.64□□□□□ -1.67
HMGB1P41-201ENST00000520234 DBPQ10586 325 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P41-201ENST00000520234 SEPT7Q16181 437 aaKnown RBP4.64□□□□□ -1.67
HMGB1P41-201ENST00000520234 VMACQ2NL98 169 aa4.64□□□□□ -1.67
HMGB1P41-201ENST00000520234 FAM26EQ8N5C1 309 aa4.64□□□□□ -1.67
HMGB1P41-201ENST00000520234 TTLL6Q8N841 843 aa4.64□□□□□ -1.67
HMGB1P41-201ENST00000520234 LINC01356Q8N9X3 169 aa4.64□□□□□ -1.67
HMGB1P41-201ENST00000520234 ZCRB1Q8TBF4 217 aaKnown RBP4.64□□□□□ -1.67
HMGB1P41-201ENST00000520234 WRNIP1Q96S55 665 aa4.64□□□□□ -1.67
HMGB1P41-201ENST00000520234 PCIF1Q9H4Z3 704 aa4.64□□□□□ -1.67
HMGB1P41-201ENST00000520234 ANKRD62A6NC57 917 aa4.63□□□□□ -1.67
HMGB1P41-201ENST00000520234 KCNK3O14649 394 aa4.63□□□□□ -1.67
HMGB1P41-201ENST00000520234 FOXP2O15409 715 aa4.63□□□□□ -1.67
HMGB1P41-201ENST00000520234 ZEB2O60315 1214 aa4.63□□□□□ -1.67
HMGB1P41-201ENST00000520234 BRINP1O60477 761 aa4.63□□□□□ -1.67
HMGB1P41-201ENST00000520234 CYP7B1O75881 506 aa4.63□□□□□ -1.67
HMGB1P41-201ENST00000520234 CYP17A1P05093 508 aa4.63□□□□□ -1.67
HMGB1P41-201ENST00000520234 C6P13671 934 aa4.63□□□□□ -1.67
HMGB1P41-201ENST00000520234 ATP2A2P16615 1042 aaKnown RBP4.63□□□□□ -1.67
HMGB1P41-201ENST00000520234 CNGA1P29973 690 aa4.63□□□□□ -1.67
HMGB1P41-201ENST00000520234 LSSP48449 732 aa4.63□□□□□ -1.67
HMGB1P41-201ENST00000520234 FNTBP49356 437 aa4.63□□□□□ -1.67
HMGB1P41-201ENST00000520234 SEC23AQ15436 765 aa4.63□□□□□ -1.67
HMGB1P41-201ENST00000520234 VASNQ6EMK4 673 aa4.63□□□□□ -1.67
HMGB1P41-201ENST00000520234 CNKSR3Q6P9H4 555 aa4.63□□□□□ -1.67
HMGB1P41-201ENST00000520234 C11orf74Q86VG3 221 aa4.63□□□□□ -1.67
HMGB1P41-201ENST00000520234 PASD1Q8IV76 773 aa4.63□□□□□ -1.67
HMGB1P41-201ENST00000520234 TMEFF1Q8IYR6 380 aa4.63□□□□□ -1.67
HMGB1P41-201ENST00000520234 EFHBQ8N7U6 833 aa4.63□□□□□ -1.67
HMGB1P41-201ENST00000520234 LINC00482Q8N8I6 264 aa4.63□□□□□ -1.67
HMGB1P41-201ENST00000520234 SMC1BQ8NDV3 1235 aa4.63□□□□□ -1.67
HMGB1P41-201ENST00000520234 BRINP2Q9C0B6 783 aa4.63□□□□□ -1.67
HMGB1P41-201ENST00000520234 EPB41L4AQ9HCS5 686 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P41-201ENST00000520234 OXSMQ9NWU1 459 aa4.63□□□□□ -1.67
HMGB1P41-201ENST00000520234 SPO11Q9Y5K1 396 aa4.63□□□□□ -1.67
HMGB1P41-201ENST00000520234 PRAMEF25A6NGN4 478 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 ZNF891A8MT65 544 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 KRT37O76014 449 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 BPIP17213 487 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 TACR2P21452 398 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 KPNA1P52294 538 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 KIF11P52732 1056 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 ITGA1P56199 1179 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 IL2P60568 153 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 HTRA3P83110 453 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 TMEM132BQ14DG7 1078 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 CD276Q5ZPR3 534 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 CPZQ66K79 652 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 PROSER1Q86XN7 944 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 FAM129CQ86XR2 697 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 NME9Q86XW9 330 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 NXPE1Q8N323 547 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 AFAP1L2Q8N4X5 818 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 KIAA1958Q8N8K9 716 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 DTX3Q8N9I9 347 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 KYQ8NBH2 561 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 IGDCC4Q8TDY8 1250 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 USP7Q93009 1102 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 E2F7Q96AV8 911 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 CLIC6Q96NY7 704 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 TTC1Q99614 292 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 GORASP1Q9BQQ3 440 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 C11orf84Q9BUA3 381 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 IFT22Q9H7X7 185 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 DLL4Q9NR61 685 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 THG1LQ9NWX6 298 aaKnown RBP4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 ARHGAP28Q9P2N2 729 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 ASB1Q9Y576 335 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 PMF1-BGLAPU3KQ54 211 aa4.62□□□□□ -1.67
HMGB1P41-201ENST00000520234 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P41-201ENST00000520234 ZNF839A8K0R7 811 aa4.61□□□□□ -1.67
HMGB1P41-201ENST00000520234 FKBP9O95302 570 aa4.61□□□□□ -1.67
HMGB1P41-201ENST00000520234 CHGBP05060 677 aa4.61□□□□□ -1.67
HMGB1P41-201ENST00000520234 AOAHP28039 575 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms