RNA–Protein interactions for RNA: ENST00000519824.6

FAM49B-215, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM49B, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-215ENST00000519824 CAPN11Q9UMQ6 739 aa13.61□□□□□ -0.23
FAM49B-215ENST00000519824 CCDC66A2RUB6 948 aa13.61□□□□□ -0.23
FAM49B-215ENST00000519824 YDJCA8MPS7 323 aa13.61□□□□□ -0.23
FAM49B-215ENST00000519824 FOSP01100 380 aaPredicted RBP13.61□□□□□ -0.23
FAM49B-215ENST00000519824 ASNSP08243 561 aa13.61□□□□□ -0.23
FAM49B-215ENST00000519824 KRT19P08727 400 aa13.61□□□□□ -0.23
FAM49B-215ENST00000519824 MAP3K9P80192 1104 aa13.61□□□□□ -0.23
FAM49B-215ENST00000519824 MTMR1Q13613 665 aa13.61□□□□□ -0.23
FAM49B-215ENST00000519824 RRP1BQ14684 758 aaKnown RBP13.61□□□□□ -0.23
FAM49B-215ENST00000519824 C10orf67Q8IYJ2 551 aa13.61□□□□□ -0.23
FAM49B-215ENST00000519824 RETREG2Q8NC44 543 aa13.61□□□□□ -0.23
FAM49B-215ENST00000519824 DCAF4Q8WV16 495 aa13.61□□□□□ -0.23
FAM49B-215ENST00000519824 ATG4CQ96DT6 458 aa13.61□□□□□ -0.23
FAM49B-215ENST00000519824 LARSQ9P2J5 1176 aaKnown RBP13.61□□□□□ -0.23
FAM49B-215ENST00000519824 ATMINO43313 823 aaPredicted RBP13.61□□□□□ -0.23
FAM49B-215ENST00000519824 PLCB3Q01970 1234 aa13.61□□□□□ -0.23
FAM49B-215ENST00000519824 KCNB1Q14721 858 aa13.61□□□□□ -0.23
FAM49B-215ENST00000519824 CEP55Q53EZ4 464 aa13.61□□□□□ -0.23
FAM49B-215ENST00000519824 PASD1Q8IV76 773 aa13.61□□□□□ -0.23
FAM49B-215ENST00000519824 TRIM58Q8NG06 486 aa13.61□□□□□ -0.23
FAM49B-215ENST00000519824 TAAR1Q96RJ0 339 aa13.61□□□□□ -0.23
FAM49B-215ENST00000519824 RPAP3Q9H6T3 665 aaPredicted RBP13.61□□□□□ -0.23
FAM49B-215ENST00000519824 CNOT7Q9UIV1 285 aaKnown RBP13.61□□□□□ -0.23
FAM49B-215ENST00000519824 PARP4Q9UKK3 1724 aaKnown RBP13.61□□□□□ -0.23
FAM49B-215ENST00000519824 ZSCAN5CA6NGD5 496 aaPredicted RBP13.6□□□□□ -0.23
FAM49B-215ENST00000519824 HOXA10P31260 410 aaPredicted RBP13.6□□□□□ -0.23
FAM49B-215ENST00000519824 PRPHP41219 470 aa13.6□□□□□ -0.23
FAM49B-215ENST00000519824 VAV2P52735 878 aa13.6□□□□□ -0.23
FAM49B-215ENST00000519824 HERVK_113P62684 666 aa13.6□□□□□ -0.23
FAM49B-215ENST00000519824 KNOP1Q1ED39 458 aaKnown RBP13.6□□□□□ -0.23
FAM49B-215ENST00000519824 NT5DC1Q5TFE4 455 aa13.6□□□□□ -0.23
FAM49B-215ENST00000519824 ANGEL2Q5VTE6 544 aaKnown RBP13.6□□□□□ -0.23
FAM49B-215ENST00000519824 RNF207Q6ZRF8 634 aa13.6□□□□□ -0.23
FAM49B-215ENST00000519824 ARHGAP20Q9P2F6 1191 aa13.6□□□□□ -0.23
FAM49B-215ENST00000519824 A0A087X0T9 212 aa13.6□□□□□ -0.23
FAM49B-215ENST00000519824 HIP1RO75146 1068 aa13.6□□□□□ -0.23
FAM49B-215ENST00000519824 FAM228BP0C875 321 aa13.6□□□□□ -0.23
FAM49B-215ENST00000519824 SNX1Q13596 522 aa13.6□□□□□ -0.23
FAM49B-215ENST00000519824 RNF187Q5TA31 235 aaPredicted RBP13.6□□□□□ -0.23
FAM49B-215ENST00000519824 SWSAP1Q6NVH7 229 aa13.6□□□□□ -0.23
FAM49B-215ENST00000519824 POP1Q99575 1024 aaKnown RBP13.6□□□□□ -0.23
FAM49B-215ENST00000519824 LRRC1Q9BTT6 524 aa13.6□□□□□ -0.23
FAM49B-215ENST00000519824 PLCB1Q9NQ66 1216 aa13.6□□□□□ -0.23
FAM49B-215ENST00000519824 NFU1Q9UMS0 254 aa13.6□□□□□ -0.23
FAM49B-215ENST00000519824 BUB1BO60566 1050 aaPredicted RBP13.6□□□□□ -0.23
FAM49B-215ENST00000519824 HSF2BPO75031 334 aa13.6□□□□□ -0.23
FAM49B-215ENST00000519824 H2AFZP0C0S5 128 aa13.6□□□□□ -0.23
FAM49B-215ENST00000519824 TBX2Q13207 712 aaPredicted RBP13.6□□□□□ -0.23
FAM49B-215ENST00000519824 CASP8Q14790 479 aa13.6□□□□□ -0.23
FAM49B-215ENST00000519824 TRIP13Q15645 432 aaPredicted RBP13.6□□□□□ -0.23
FAM49B-215ENST00000519824 H2AFVQ71UI9 128 aa13.6□□□□□ -0.23
FAM49B-215ENST00000519824 TMEM139Q8IV31 216 aa13.6□□□□□ -0.23
FAM49B-215ENST00000519824 SCFD1Q8WVM8 642 aa13.6□□□□□ -0.23
FAM49B-215ENST00000519824 GLT8D2Q9H1C3 349 aa13.6□□□□□ -0.23
FAM49B-215ENST00000519824 RNF146Q9NTX7 359 aa13.6□□□□□ -0.23
FAM49B-215ENST00000519824 SRGAP2CP0DJJ0 459 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 KLRC1P26715 233 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 GMPSP49915 693 aaPredicted RBP13.59□□□□□ -0.23
FAM49B-215ENST00000519824 CFAP58Q5T655 872 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 PI4K2AQ9BTU6 479 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 ZNF446Q9NWS9 450 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 DNAJC12Q9UKB3 198 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 SLIT2O94813 1529 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 PDS5AQ29RF7 1337 aaKnown RBP13.59□□□□□ -0.23
FAM49B-215ENST00000519824 NUP98P52948 1817 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 GOLGA6BA6NDN3 693 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 SPDYE2BA6NHP3 402 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 FANCGO15287 622 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 SPDYE6P0CI01 402 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 LRRC63Q05C16 580 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 MTM1Q13496 603 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 WHAMMP3Q1A5X7 153 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 DDX42Q86XP3 938 aaKnown RBP eCLIP13.59□□□□□ -0.23
FAM49B-215ENST00000519824 DDX47Q9H0S4 455 aaKnown RBP13.59□□□□□ -0.23
FAM49B-215ENST00000519824 NYAP2Q9P242 653 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 COL18A1P39060 1754 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 KRIT1O00522 736 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 HEXIM1O94992 359 aaKnown RBP13.59□□□□□ -0.23
FAM49B-215ENST00000519824 FGRP09769 529 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 CD58P19256 250 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 RPS6P62753 249 aaKnown RBP13.59□□□□□ -0.23
FAM49B-215ENST00000519824 MYL7Q01449 175 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 PLCD3Q8N3E9 789 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 HDAC7Q8WUI4 952 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 FAM118BQ9BPY3 351 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 DEFB129Q9H1M3 183 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 GABBR1Q9UBS5 961 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 GAKO14976 1311 aa13.59□□□□□ -0.23
FAM49B-215ENST00000519824 PVALEFA0A1B0GWK0 134 aa13.58□□□□□ -0.23
FAM49B-215ENST00000519824 AKAP3O75969 853 aa13.58□□□□□ -0.23
FAM49B-215ENST00000519824 SMTNP53814 917 aa13.58□□□□□ -0.23
FAM49B-215ENST00000519824 CFAP221Q4G0U5 840 aa13.58□□□□□ -0.23
FAM49B-215ENST00000519824 SMAP1Q8IYB5 467 aaPredicted RBP13.58□□□□□ -0.23
FAM49B-215ENST00000519824 TXLNBQ8N3L3 684 aa13.58□□□□□ -0.23
FAM49B-215ENST00000519824 CCDC114Q96M63 670 aa13.58□□□□□ -0.23
FAM49B-215ENST00000519824 NACC1Q96RE7 527 aa13.58□□□□□ -0.23
FAM49B-215ENST00000519824 ZNRF3Q9ULT6 936 aa13.58□□□□□ -0.23
FAM49B-215ENST00000519824 NOP56O00567 594 aaKnown RBP13.58□□□□□ -0.24
FAM49B-215ENST00000519824 MEIS2O14770 477 aa13.58□□□□□ -0.24
FAM49B-215ENST00000519824 CSDE1O75534 798 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms