RNA–Protein interactions for RNA: ENST00000519634.5

CTNNA1-217, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-217ENST00000519634 MCF2L2Q86YR7 1114 aa7.57□□□□□ -1.2
CTNNA1-217ENST00000519634 SIRT2Q8IXJ6 389 aa7.57□□□□□ -1.2
CTNNA1-217ENST00000519634 SYTL5Q8TDW5 730 aaPredicted RBP7.57□□□□□ -1.2
CTNNA1-217ENST00000519634 GPATCH3Q96I76 525 aa7.57□□□□□ -1.2
CTNNA1-217ENST00000519634 RPGRIP1Q96KN7 1286 aa7.57□□□□□ -1.2
CTNNA1-217ENST00000519634 RMDN3Q96TC7 470 aa7.57□□□□□ -1.2
CTNNA1-217ENST00000519634 LRRCC1Q9C099 1032 aa7.57□□□□□ -1.2
CTNNA1-217ENST00000519634 CLEC1BQ9P126 229 aa7.57□□□□□ -1.2
CTNNA1-217ENST00000519634 CDV3Q9UKY7 258 aaKnown RBP7.57□□□□□ -1.2
CTNNA1-217ENST00000519634 PLAGL2Q9UPG8 496 aa7.57□□□□□ -1.2
CTNNA1-217ENST00000519634 USP15Q9Y4E8 981 aaPredicted RBP7.57□□□□□ -1.2
CTNNA1-217ENST00000519634 ZFHX2Q9C0A1 2572 aaPredicted RBP7.57□□□□□ -1.2
CTNNA1-217ENST00000519634 SCN5AQ14524 2016 aa7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 C5orf42Q9H799 3197 aa7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 TANC1Q9C0D5 1861 aa7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 FSD2A1L4K1 749 aa7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 ORC4O43929 436 aa7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 CSPG5O95196 566 aa7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 CTSHP09668 335 aa7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 PDHBP11177 359 aa7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 GNAT1P11488 350 aa7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 HOXC8P31273 242 aa7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 SOX11P35716 441 aa7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 VAC14Q08AM6 782 aa7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 ZNF543Q08ER8 600 aa7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 BTG3Q14201 252 aaPredicted RBP7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 USH1GQ495M9 461 aa7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 CELF3Q5SZQ8 465 aaKnown RBP7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 ARHGEF16Q5VV41 709 aa7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 PANK1Q8TE04 598 aa7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 P2RX5Q93086 422 aa7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 NKD2Q969F2 451 aaPredicted RBP7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 RIPOR3Q96MK2 946 aa7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 SPATA33Q96N06 139 aa7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 CDK15Q96Q40 435 aa7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 TAAR1Q96RJ0 339 aa7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 TMEM47Q9BQJ4 181 aa7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 RC3H2Q9HBD1 1191 aaKnown RBP7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 MAP4K5Q9Y4K4 846 aa7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 MCM3APO60318 1980 aa7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 TECTAO75443 2155 aa7.56□□□□□ -1.2
CTNNA1-217ENST00000519634 ABCB11O95342 1321 aa7.55□□□□□ -1.2
CTNNA1-217ENST00000519634 ZDBF2Q9HCK1 2354 aa7.55□□□□□ -1.2
CTNNA1-217ENST00000519634 RBAK-RBAKDNI3L0D1 243 aa7.55□□□□□ -1.2
CTNNA1-217ENST00000519634 TREHO43280 583 aa7.55□□□□□ -1.2
CTNNA1-217ENST00000519634 NR3C2P08235 984 aa7.55□□□□□ -1.2
CTNNA1-217ENST00000519634 SMIM10L2AP0DMW4 78 aa7.55□□□□□ -1.2
CTNNA1-217ENST00000519634 SMIM10L2BP0DMW5 78 aa7.55□□□□□ -1.2
CTNNA1-217ENST00000519634 NRIP1P48552 1158 aa7.55□□□□□ -1.2
CTNNA1-217ENST00000519634 CAMK1Q14012 370 aa7.55□□□□□ -1.2
CTNNA1-217ENST00000519634 FAM26DQ5JW98 314 aa7.55□□□□□ -1.2
CTNNA1-217ENST00000519634 GPATCH4Q5T3I0 446 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-217ENST00000519634 UBALD2Q8IYN6 164 aa7.55□□□□□ -1.2
CTNNA1-217ENST00000519634 ADSSL1Q8N142 457 aa7.55□□□□□ -1.2
CTNNA1-217ENST00000519634 SNIP1Q8TAD8 396 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-217ENST00000519634 SUSD6Q92537 303 aa7.55□□□□□ -1.2
CTNNA1-217ENST00000519634 ZNF689Q96CS4 500 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-217ENST00000519634 C16orf70Q9BSU1 422 aa7.55□□□□□ -1.2
CTNNA1-217ENST00000519634 TCP11L1Q9NUJ3 509 aa7.55□□□□□ -1.2
CTNNA1-217ENST00000519634 COL20A1Q9P218 1284 aa7.55□□□□□ -1.2
CTNNA1-217ENST00000519634 ANAPC4Q9UJX5 808 aa7.55□□□□□ -1.2
CTNNA1-217ENST00000519634 BARX2Q9UMQ3 279 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-217ENST00000519634 MRPL11Q9Y3B7 192 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-217ENST00000519634 TET1Q8NFU7 2136 aa7.55□□□□□ -1.2
CTNNA1-217ENST00000519634 H3BRB1 525 aa7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 GGPS1O95749 300 aa7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 GLP2RO95838 553 aa7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 ITGB1P05556 798 aa7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 FGRP09769 529 aa7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 SNHG28P0DPA3 235 aa7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 TGFB3P10600 412 aa7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 HSPD1P10809 573 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 EIF2AK2P19525 551 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 HSDL1Q3SXM5 330 aa7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 ZMYM1Q5SVZ6 1142 aa7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 ADGRD2Q7Z7M1 963 aa7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 CMTR2Q8IYT2 770 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 SPPL3Q8TCT6 385 aa7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 TBC1D5Q92609 795 aa7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 TTC14Q96N46 770 aa7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 NEK1Q96PY6 1258 aa7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 SEC62Q99442 399 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 CDCA3Q99618 268 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 OSBPL7Q9BZF2 842 aa7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 CHMP4BQ9H444 224 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 RNPEPQ9H4A4 650 aa7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 TUT1Q9H6E5 874 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 TLE6Q9H808 572 aa7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 MLXIPQ9HAP2 919 aa7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 PXMP2Q9NR77 195 aa7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 TOMM22Q9NS69 142 aa7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 ZBTB40Q9NUA8 1239 aa7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 TOR4AQ9NXH8 423 aa7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 DDX19BQ9UMR2 479 aa7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 CACNA1HO95180 2353 aa7.54□□□□□ -1.2
CTNNA1-217ENST00000519634 PTPRZ1P23471 2315 aaPredicted RBP7.53□□□□□ -1.2
CTNNA1-217ENST00000519634 CCDC171Q6TFL3 1326 aa7.53□□□□□ -1.2
CTNNA1-217ENST00000519634 SIP14410 1827 aa7.53□□□□□ -1.2
CTNNA1-217ENST00000519634 BAZ2AQ9UIF9 1905 aaKnown RBP7.53□□□□□ -1.2
CTNNA1-217ENST00000519634 ENPP3O14638 875 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms