RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 BMPR1AP36894 532 aa12.37□□□□□ -0.43
PVT1-208ENST00000519481 PAK2Q13177 524 aa12.37□□□□□ -0.43
PVT1-208ENST00000519481 PLCB4Q15147 1175 aa12.37□□□□□ -0.43
PVT1-208ENST00000519481 PFKFB3Q16875 520 aaPredicted RBP12.37□□□□□ -0.43
PVT1-208ENST00000519481 ODR4Q5SWX8 454 aa12.37□□□□□ -0.43
PVT1-208ENST00000519481 JAKMIP3Q5VZ66 844 aa12.37□□□□□ -0.43
PVT1-208ENST00000519481 MIS18BP1Q6P0N0 1132 aa12.37□□□□□ -0.43
PVT1-208ENST00000519481 BLOC1S2Q6QNY1 142 aa12.37□□□□□ -0.43
PVT1-208ENST00000519481 FAM43BQ6ZT52 329 aaPredicted RBP12.37□□□□□ -0.43
PVT1-208ENST00000519481 PLA2G4DQ86XP0 818 aa12.37□□□□□ -0.43
PVT1-208ENST00000519481 JAKMIP1Q96N16 626 aaKnown RBP12.37□□□□□ -0.43
PVT1-208ENST00000519481 LMAN2LQ9H0V9 348 aa12.37□□□□□ -0.43
PVT1-208ENST00000519481 TMEM260Q9NX78 707 aa12.37□□□□□ -0.43
PVT1-208ENST00000519481 COL4A6Q14031 1691 aa12.37□□□□□ -0.43
PVT1-208ENST00000519481 REV3LO60673 3130 aa12.37□□□□□ -0.43
PVT1-208ENST00000519481 ESYT2A0FGR8 921 aa12.36□□□□□ -0.43
PVT1-208ENST00000519481 RBAK-RBAKDNI3L0D1 243 aa12.36□□□□□ -0.43
PVT1-208ENST00000519481 DDX39AO00148 427 aaKnown RBP12.36□□□□□ -0.43
PVT1-208ENST00000519481 ATG7O95352 703 aa12.36□□□□□ -0.43
PVT1-208ENST00000519481 GNA11P29992 359 aa12.36□□□□□ -0.43
PVT1-208ENST00000519481 CDC27P30260 824 aa12.36□□□□□ -0.43
PVT1-208ENST00000519481 CLK2P49760 499 aaKnown RBP12.36□□□□□ -0.43
PVT1-208ENST00000519481 SETQ01105 290 aaPredicted RBP12.36□□□□□ -0.43
PVT1-208ENST00000519481 KRT76Q01546 638 aa12.36□□□□□ -0.43
PVT1-208ENST00000519481 APOBRQ0VD83 1088 aa12.36□□□□□ -0.43
PVT1-208ENST00000519481 ITGB3BPQ13352 177 aaPredicted RBP12.36□□□□□ -0.43
PVT1-208ENST00000519481 TCEAL5Q5H9L2 206 aa12.36□□□□□ -0.43
PVT1-208ENST00000519481 PTCRAQ6ISU1 281 aaPredicted RBP12.36□□□□□ -0.43
PVT1-208ENST00000519481 PDXDC2PQ6P474 469 aa12.36□□□□□ -0.43
PVT1-208ENST00000519481 Q6ZUG5 572 aa12.36□□□□□ -0.43
PVT1-208ENST00000519481 SKAP1Q86WV1 359 aa12.36□□□□□ -0.43
PVT1-208ENST00000519481 NPAS4Q8IUM7 802 aa12.36□□□□□ -0.43
PVT1-208ENST00000519481 CKAP2LQ8IYA6 745 aa12.36□□□□□ -0.43
PVT1-208ENST00000519481 BICD2Q8TD16 824 aa12.36□□□□□ -0.43
PVT1-208ENST00000519481 BRF1Q92994 677 aa12.36□□□□□ -0.43
PVT1-208ENST00000519481 CELF4Q9BZC1 486 aaKnown RBP12.36□□□□□ -0.43
PVT1-208ENST00000519481 AGO3Q9H9G7 860 aaKnown RBP12.36□□□□□ -0.43
PVT1-208ENST00000519481 ZNF302Q9NR11 478 aa12.36□□□□□ -0.43
PVT1-208ENST00000519481 FAM217BQ9NTX9 383 aaPredicted RBP12.36□□□□□ -0.43
PVT1-208ENST00000519481 LRFN2Q9ULH4 789 aa12.36□□□□□ -0.43
PVT1-208ENST00000519481 COL1A2P08123 1366 aa12.35□□□□□ -0.43
PVT1-208ENST00000519481 C5orf67F2Z3F1 127 aa12.35□□□□□ -0.43
PVT1-208ENST00000519481 IPO5O00410 1097 aaKnown RBP12.35□□□□□ -0.43
PVT1-208ENST00000519481 CYP3A4P08684 503 aa12.35□□□□□ -0.43
PVT1-208ENST00000519481 KLRC1P26715 233 aa12.35□□□□□ -0.43
PVT1-208ENST00000519481 PSMA5P28066 241 aa12.35□□□□□ -0.43
PVT1-208ENST00000519481 TMEM62Q0P6H9 643 aa12.35□□□□□ -0.43
PVT1-208ENST00000519481 ZNF484Q5JVG2 852 aa12.35□□□□□ -0.43
PVT1-208ENST00000519481 MTHFD1LQ6UB35 978 aa12.35□□□□□ -0.43
PVT1-208ENST00000519481 ABHD15Q6UXT9 468 aa12.35□□□□□ -0.43
PVT1-208ENST00000519481 REXO1Q8N1G1 1221 aaKnown RBP12.35□□□□□ -0.43
PVT1-208ENST00000519481 ATP8B4Q8TF62 1192 aa12.35□□□□□ -0.43
PVT1-208ENST00000519481 TRAPPC12Q8WVT3 735 aa12.35□□□□□ -0.43
PVT1-208ENST00000519481 CLP1Q92989 425 aaKnown RBP12.35□□□□□ -0.43
PVT1-208ENST00000519481 PPP2R3CQ969Q6 453 aa12.35□□□□□ -0.43
PVT1-208ENST00000519481 ZBTB10Q96DT7 871 aa12.35□□□□□ -0.43
PVT1-208ENST00000519481 PABPC5Q96DU9 382 aaKnown RBP12.35□□□□□ -0.43
PVT1-208ENST00000519481 ZNF577Q9BSK1 485 aa12.35□□□□□ -0.43
PVT1-208ENST00000519481 PLVAPQ9BX97 442 aa12.35□□□□□ -0.43
PVT1-208ENST00000519481 ZMYND12Q9H0C1 365 aa12.35□□□□□ -0.43
PVT1-208ENST00000519481 TBC1D22BQ9NU19 505 aa12.35□□□□□ -0.43
PVT1-208ENST00000519481 PADI3Q9ULW8 664 aa12.35□□□□□ -0.43
PVT1-208ENST00000519481 GINS2Q9Y248 185 aa12.35□□□□□ -0.43
PVT1-208ENST00000519481 IGSF9BQ9UPX0 1349 aa12.35□□□□□ -0.43
PVT1-208ENST00000519481 KDM3AQ9Y4C1 1321 aa12.35□□□□□ -0.43
PVT1-208ENST00000519481 IGKV6D-21A0A0A0MT36 114 aa12.34□□□□□ -0.43
PVT1-208ENST00000519481 FAM86B1E9PN63 330 aa12.34□□□□□ -0.43
PVT1-208ENST00000519481 PRPF3O43395 683 aaKnown RBP12.34□□□□□ -0.43
PVT1-208ENST00000519481 DGKIO75912 1065 aa12.34□□□□□ -0.43
PVT1-208ENST00000519481 REC8O95072 547 aa12.34□□□□□ -0.43
PVT1-208ENST00000519481 FAM86B2P0C5J1 330 aa12.34□□□□□ -0.43
PVT1-208ENST00000519481 SSTR3P32745 418 aaPredicted RBP12.34□□□□□ -0.43
PVT1-208ENST00000519481 NFX1Q12986 1120 aaKnown RBP12.34□□□□□ -0.43
PVT1-208ENST00000519481 TMEM31Q5JXX7 168 aa12.34□□□□□ -0.43
PVT1-208ENST00000519481 SWSAP1Q6NVH7 229 aa12.34□□□□□ -0.43
PVT1-208ENST00000519481 CMTR2Q8IYT2 770 aaKnown RBP12.34□□□□□ -0.43
PVT1-208ENST00000519481 CCDC148Q8NFR7 591 aa12.34□□□□□ -0.43
PVT1-208ENST00000519481 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.34□□□□□ -0.43
PVT1-208ENST00000519481 NEK9Q8TD19 979 aa12.34□□□□□ -0.43
PVT1-208ENST00000519481 ZNF689Q96CS4 500 aaPredicted RBP12.34□□□□□ -0.43
PVT1-208ENST00000519481 CCDC136Q96JN2 1154 aa12.34□□□□□ -0.43
PVT1-208ENST00000519481 EPHX3Q9H6B9 360 aa12.34□□□□□ -0.43
PVT1-208ENST00000519481 CLDND1Q9NY35 253 aa12.34□□□□□ -0.43
PVT1-208ENST00000519481 MUC3AQ02505 3323 aa12.34□□□□□ -0.43
PVT1-208ENST00000519481 TTC3P53804 2025 aa12.33□□□□□ -0.43
PVT1-208ENST00000519481 XIRP2A4UGR9 3374 aa12.33□□□□□ -0.44
PVT1-208ENST00000519481 GRXCR2A6NFK2 248 aa12.33□□□□□ -0.44
PVT1-208ENST00000519481 H3BQ06 376 aaPredicted RBP12.33□□□□□ -0.44
PVT1-208ENST00000519481 RPS6KA5O75582 802 aa12.33□□□□□ -0.44
PVT1-208ENST00000519481 CCNE2O96020 404 aa12.33□□□□□ -0.44
PVT1-208ENST00000519481 PSAPP07602 524 aa12.33□□□□□ -0.44
PVT1-208ENST00000519481 CPA1P15085 419 aa12.33□□□□□ -0.44
PVT1-208ENST00000519481 IBSPP21815 317 aaPredicted RBP12.33□□□□□ -0.44
PVT1-208ENST00000519481 HSPA4P34932 840 aa12.33□□□□□ -0.44
PVT1-208ENST00000519481 NAALADL2Q58DX5 795 aa12.33□□□□□ -0.44
PVT1-208ENST00000519481 ZNF746Q6NUN9 644 aaPredicted RBP12.33□□□□□ -0.44
PVT1-208ENST00000519481 CCDC60Q8IWA6 550 aaPredicted RBP12.33□□□□□ -0.44
PVT1-208ENST00000519481 FAM178BQ8IXR5 827 aa12.33□□□□□ -0.44
PVT1-208ENST00000519481 SMAP1Q8IYB5 467 aaPredicted RBP12.33□□□□□ -0.44
PVT1-208ENST00000519481 GJD3Q8N144 294 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms