RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 C19orf44Q9H6X5 657 aa5.87□□□□□ -1.47
CTNNA1-212ENST00000518919 GPATCH2Q9NW75 528 aa5.87□□□□□ -1.47
CTNNA1-212ENST00000518919 MIS18AQ9NYP9 233 aa5.87□□□□□ -1.47
CTNNA1-212ENST00000518919 TSPYL4Q9UJ04 414 aa5.87□□□□□ -1.47
CTNNA1-212ENST00000518919 ABCC6O95255 1503 aa5.87□□□□□ -1.47
CTNNA1-212ENST00000518919 RGPD2P0DJD1 1756 aa5.87□□□□□ -1.47
CTNNA1-212ENST00000518919 XIRP1Q702N8 1843 aaKnown RBP5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 KDM3BQ7LBC6 1761 aa5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 ADAMTS7Q9UKP4 1686 aa5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 OVOS2A0A0G2JMS6 1433 aa5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 CNTNAP5Q8WYK1 1306 aa5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 IGF2BP3O00425 579 aaKnown RBP eCLIP5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 GABRDO14764 452 aa5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 ZNF205O95201 554 aa5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 SYPP08247 313 aa5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 LCP1P13796 627 aa5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 VAV1P15498 845 aa5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 LSSP48449 732 aa5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 OCRLQ01968 901 aa5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 CYP27C1Q4G0S4 372 aa5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 ATP13A4Q4VNC1 1196 aa5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 TMEM177Q53S58 311 aa5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 FAM47CQ5HY64 1035 aa5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 IQCEQ6IPM2 695 aa5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 CCSAPQ6IQ19 270 aaPredicted RBP5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 C11orf74Q86VG3 221 aa5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 PASD1Q8IV76 773 aa5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 SIRT2Q8IXJ6 389 aa5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 CHPFQ8IZ52 775 aa5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 IL17REQ8NFR9 667 aa5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 PCDH19Q8TAB3 1148 aa5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 RTF1Q92541 710 aaKnown RBP5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 DDX17Q92841 729 aaKnown RBP5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 HEXIM2Q96MH2 286 aaKnown RBP5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 THG1LQ9NWX6 298 aaKnown RBP5.86□□□□□ -1.47
CTNNA1-212ENST00000518919 COL18A1P39060 1754 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 STRCQ7RTU9 1775 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 MEGF6O75095 1541 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 PXDNLA1KZ92 1463 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 PTPRCP08575 1304 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 TRBV23OR9-2A0A075B6M9 112 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 NPHP3-ACAD11A0A0J9YXS1 232 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 SSU72P8A0A1W2PR75 194 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 TPD52L2O43399 206 aaKnown RBP5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 MYO1BO43795 1136 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 PRKD3O94806 890 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 SOD2P04179 222 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 CKMP06732 381 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 PAMP19021 973 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 COL8A1P27658 744 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 GNALP38405 381 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 DNM2P50570 870 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 PCBP3P57721 371 aaKnown RBP5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 NUCB1Q02818 461 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 ABCB5Q2M3G0 1257 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 OGFOD3Q6PK18 319 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 ARHGAP27Q6ZUM4 889 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 G2E3Q7L622 706 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 ZAR1Q86SH2 424 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 CLEC10AQ8IUN9 316 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 MYO1HQ8N1T3 1032 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 CISD2Q8N5K1 135 aaKnown RBP5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 CDH19Q9H159 772 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 B4GALT6Q9UBX8 382 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 SPEF1Q9Y4P9 236 aa5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 N4BP2Q86UW6 1770 aaPredicted RBP5.85□□□□□ -1.47
CTNNA1-212ENST00000518919 SOS1Q07889 1333 aaPredicted RBP5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 CCDC66A2RUB6 948 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 ARNTLO00327 626 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 ULK1O75385 1050 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 FBXO21O94952 628 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 SRFP11831 508 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 GRK2P25098 689 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 ADMP35318 185 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 GRK3P35626 688 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 KPNA1P52294 538 aaPredicted RBP5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 ST5P78524 1137 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 LAPTM5Q13571 262 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 RTP2Q5QGT7 225 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 ZNF530Q6P9A1 599 aaPredicted RBP5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 CERS3Q8IU89 383 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 NAT16Q8N8M0 369 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 RCBTB1Q8NDN9 531 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 CHTF18Q8WVB6 975 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 GATA6Q92908 595 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 FBXW5Q969U6 566 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 MMP19Q99542 508 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 FAM83CQ9BQN1 747 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 CDADC1Q9BWV3 514 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 RTFDC1Q9BY42 306 aaPredicted RBP5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 FOXP3Q9BZS1 431 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 IPPKQ9H8X2 491 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 EMC7Q9NPA0 242 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 BABAM1Q9NWV8 329 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 ZNF180Q9UJW8 692 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 TCFL5Q9UL49 500 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 RIPOR2Q9Y4F9 1068 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 PCDHA2Q9Y5H9 948 aa5.84□□□□□ -1.47
CTNNA1-212ENST00000518919 MRC1P22897 1456 aa5.83□□□□□ -1.48
CTNNA1-212ENST00000518919 KDM6AO15550 1401 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms