RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 LZTS3O60299 673 aaPredicted RBP7.22□□□□□ -1.25
PABPC1-207ENST00000518716 SURF6O75683 361 aaKnown RBP7.22□□□□□ -1.25
PABPC1-207ENST00000518716 BCAR3O75815 825 aa7.22□□□□□ -1.25
PABPC1-207ENST00000518716 CDK8P49336 464 aa7.22□□□□□ -1.25
PABPC1-207ENST00000518716 TTLL4Q14679 1199 aa7.22□□□□□ -1.25
PABPC1-207ENST00000518716 SETDB1Q15047 1291 aa7.22□□□□□ -1.25
PABPC1-207ENST00000518716 SLC9C2Q5TAH2 1124 aa7.22□□□□□ -1.25
PABPC1-207ENST00000518716 C12orf60Q5U649 245 aa7.22□□□□□ -1.25
PABPC1-207ENST00000518716 IER5Q5VY09 327 aa7.22□□□□□ -1.25
PABPC1-207ENST00000518716 KRT40Q6A162 431 aa7.22□□□□□ -1.25
PABPC1-207ENST00000518716 CXCL17Q6UXB2 119 aa7.22□□□□□ -1.25
PABPC1-207ENST00000518716 HFE2Q6ZVN8 426 aa7.22□□□□□ -1.25
PABPC1-207ENST00000518716 C16orf86Q6ZW13 317 aa7.22□□□□□ -1.25
PABPC1-207ENST00000518716 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.22□□□□□ -1.25
PABPC1-207ENST00000518716 KRT25Q7Z3Z0 450 aa7.22□□□□□ -1.25
PABPC1-207ENST00000518716 ABI1Q8IZP0 508 aa7.22□□□□□ -1.25
PABPC1-207ENST00000518716 LCORLQ8N3X6 602 aa7.22□□□□□ -1.25
PABPC1-207ENST00000518716 FAM133AQ8N9E0 248 aa7.22□□□□□ -1.25
PABPC1-207ENST00000518716 GLMNQ92990 594 aa7.22□□□□□ -1.25
PABPC1-207ENST00000518716 CRNKL1Q9BZJ0 848 aaKnown RBP7.22□□□□□ -1.25
PABPC1-207ENST00000518716 TRPV6Q9H1D0 765 aa7.22□□□□□ -1.25
PABPC1-207ENST00000518716 MTIF3Q9H2K0 278 aaKnown RBP7.22□□□□□ -1.25
PABPC1-207ENST00000518716 C7orf69Q9H7B7 122 aa7.22□□□□□ -1.25
PABPC1-207ENST00000518716 KANSL2Q9H9L4 492 aa7.22□□□□□ -1.25
PABPC1-207ENST00000518716 ZHX1Q9UKY1 873 aaPredicted RBP7.22□□□□□ -1.25
PABPC1-207ENST00000518716 SLC4A7Q9Y6M7 1214 aa7.22□□□□□ -1.25
PABPC1-207ENST00000518716 ZBED9Q6R2W3 1325 aa7.22□□□□□ -1.25
PABPC1-207ENST00000518716 ZDBF2Q9HCK1 2354 aa7.22□□□□□ -1.25
PABPC1-207ENST00000518716 NAV1Q8NEY1 1877 aa7.21□□□□□ -1.25
PABPC1-207ENST00000518716 GREB1LQ9C091 1923 aaPredicted RBP7.21□□□□□ -1.25
PABPC1-207ENST00000518716 PTPRZ1P23471 2315 aaPredicted RBP7.21□□□□□ -1.26
PABPC1-207ENST00000518716 CYP2D7A0A087X1C5 515 aa7.21□□□□□ -1.26
PABPC1-207ENST00000518716 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.21□□□□□ -1.26
PABPC1-207ENST00000518716 DHX15O43143 795 aaKnown RBP7.21□□□□□ -1.26
PABPC1-207ENST00000518716 PRKAB2O43741 272 aa7.21□□□□□ -1.26
PABPC1-207ENST00000518716 B4GALT4O60513 344 aa7.21□□□□□ -1.26
PABPC1-207ENST00000518716 CABYRO75952 493 aa7.21□□□□□ -1.26
PABPC1-207ENST00000518716 ATP2A2P16615 1042 aaKnown RBP7.21□□□□□ -1.26
PABPC1-207ENST00000518716 PTGS1P23219 599 aa7.21□□□□□ -1.26
PABPC1-207ENST00000518716 SOX11P35716 441 aa7.21□□□□□ -1.26
PABPC1-207ENST00000518716 CCL23P55773 120 aa7.21□□□□□ -1.26
PABPC1-207ENST00000518716 FGD1P98174 961 aa7.21□□□□□ -1.26
PABPC1-207ENST00000518716 BEX3Q00994 111 aa7.21□□□□□ -1.26
PABPC1-207ENST00000518716 TAP1Q03518 808 aa7.21□□□□□ -1.26
PABPC1-207ENST00000518716 ITGA7Q13683 1181 aa7.21□□□□□ -1.26
PABPC1-207ENST00000518716 FAM83BQ5T0W9 1011 aa7.21□□□□□ -1.26
PABPC1-207ENST00000518716 ARMCX2Q7L311 632 aa7.21□□□□□ -1.26
PABPC1-207ENST00000518716 TRIM42Q8IWZ5 723 aa7.21□□□□□ -1.26
PABPC1-207ENST00000518716 CCDC144CPQ8IYA2 1237 aa7.21□□□□□ -1.26
PABPC1-207ENST00000518716 RPUSD2Q8IZ73 545 aaKnown RBP7.21□□□□□ -1.26
PABPC1-207ENST00000518716 DEPDC4Q8N2C3 294 aa7.21□□□□□ -1.26
PABPC1-207ENST00000518716 POU5F2Q8N7G0 328 aa7.21□□□□□ -1.26
PABPC1-207ENST00000518716 PHOSPHO2Q8TCD6 241 aa7.21□□□□□ -1.26
PABPC1-207ENST00000518716 IFT43Q96FT9 208 aa7.21□□□□□ -1.26
PABPC1-207ENST00000518716 SLF1Q9BQI6 1058 aa7.21□□□□□ -1.26
PABPC1-207ENST00000518716 SPC25Q9HBM1 224 aa7.21□□□□□ -1.26
PABPC1-207ENST00000518716 SLC38A10Q9HBR0 1119 aa7.21□□□□□ -1.26
PABPC1-207ENST00000518716 MYO7AQ13402 2215 aa7.21□□□□□ -1.26
PABPC1-207ENST00000518716 ZNF532Q9HCE3 1301 aa7.21□□□□□ -1.26
PABPC1-207ENST00000518716 LRRC37A2A6NM11 1700 aa7.21□□□□□ -1.26
PABPC1-207ENST00000518716 IGKV6D-41A0A0C4DH26 115 aa7.2□□□□□ -1.26
PABPC1-207ENST00000518716 HMX2A2RU54 273 aa7.2□□□□□ -1.26
PABPC1-207ENST00000518716 FAM86C2PA6NEL3 165 aa7.2□□□□□ -1.26
PABPC1-207ENST00000518716 PRR33A8MZF0 331 aa7.2□□□□□ -1.26
PABPC1-207ENST00000518716 USP17L12C9JPN9 530 aa7.2□□□□□ -1.26
PABPC1-207ENST00000518716 USP17L21D6R901 530 aa7.2□□□□□ -1.26
PABPC1-207ENST00000518716 IPO8O15397 1037 aaKnown RBP7.2□□□□□ -1.26
PABPC1-207ENST00000518716 NDUFB10O96000 172 aa7.2□□□□□ -1.26
PABPC1-207ENST00000518716 CA3P07451 260 aa7.2□□□□□ -1.26
PABPC1-207ENST00000518716 PFKMP08237 780 aa7.2□□□□□ -1.26
PABPC1-207ENST00000518716 TARSP26639 723 aaKnown RBP7.2□□□□□ -1.26
PABPC1-207ENST00000518716 CNTN2Q02246 1040 aa7.2□□□□□ -1.26
PABPC1-207ENST00000518716 GRB10Q13322 594 aa7.2□□□□□ -1.26
PABPC1-207ENST00000518716 HIF1AQ16665 826 aa7.2□□□□□ -1.26
PABPC1-207ENST00000518716 TMEM67Q5HYA8 995 aa7.2□□□□□ -1.26
PABPC1-207ENST00000518716 TMEM63BQ5T3F8 832 aa7.2□□□□□ -1.26
PABPC1-207ENST00000518716 RNF43Q68DV7 783 aa7.2□□□□□ -1.26
PABPC1-207ENST00000518716 SNRNP48Q6IEG0 339 aaKnown RBP7.2□□□□□ -1.26
PABPC1-207ENST00000518716 TAPT1Q6NXT6 567 aa7.2□□□□□ -1.26
PABPC1-207ENST00000518716 SPRED2Q7Z698 418 aa7.2□□□□□ -1.26
PABPC1-207ENST00000518716 TMEM57Q8N5G2 664 aa7.2□□□□□ -1.26
PABPC1-207ENST00000518716 PRPF38AQ8NAV1 312 aaKnown RBP7.2□□□□□ -1.26
PABPC1-207ENST00000518716 CHST13Q8NET6 341 aa7.2□□□□□ -1.26
PABPC1-207ENST00000518716 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.2□□□□□ -1.26
PABPC1-207ENST00000518716 MKL1Q969V6 931 aa7.2□□□□□ -1.26
PABPC1-207ENST00000518716 VTI1AQ96AJ9 217 aa7.2□□□□□ -1.26
PABPC1-207ENST00000518716 DDX11Q96FC9 970 aa7.2□□□□□ -1.26
PABPC1-207ENST00000518716 SCLYQ96I15 445 aa7.2□□□□□ -1.26
PABPC1-207ENST00000518716 NUP88Q99567 741 aaPredicted RBP7.2□□□□□ -1.26
PABPC1-207ENST00000518716 ALDH8A1Q9H2A2 487 aaPredicted RBP7.2□□□□□ -1.26
PABPC1-207ENST00000518716 ATP8A2Q9NTI2 1148 aa7.2□□□□□ -1.26
PABPC1-207ENST00000518716 NYAP2Q9P242 653 aa7.2□□□□□ -1.26
PABPC1-207ENST00000518716 Q9Y3F1 56 aa7.2□□□□□ -1.26
PABPC1-207ENST00000518716 BAZ2AQ9UIF9 1905 aaKnown RBP7.2□□□□□ -1.26
PABPC1-207ENST00000518716 SCN10AQ9Y5Y9 1956 aa7.19□□□□□ -1.26
PABPC1-207ENST00000518716 RIF1Q5UIP0 2472 aaKnown RBP7.19□□□□□ -1.26
PABPC1-207ENST00000518716 SCN5AQ14524 2016 aa7.19□□□□□ -1.26
PABPC1-207ENST00000518716 F5H6K3 240 aa7.19□□□□□ -1.26
PABPC1-207ENST00000518716 TGFBR3LH3BV60 316 aa7.19□□□□□ -1.26
PABPC1-207ENST00000518716 EIF2AK2P19525 551 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms