RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 FAM26EQ8N5C1 309 aa6.18□□□□□ -1.42
SQLE-202ENST00000518604 SMARCC2Q8TAQ2 1214 aa6.18□□□□□ -1.42
SQLE-202ENST00000518604 IGDCC4Q8TDY8 1250 aa6.18□□□□□ -1.42
SQLE-202ENST00000518604 WRNIP1Q96S55 665 aa6.18□□□□□ -1.42
SQLE-202ENST00000518604 PPP1R16BQ96T49 567 aa6.18□□□□□ -1.42
SQLE-202ENST00000518604 MENTQ9BUN1 341 aa6.18□□□□□ -1.42
SQLE-202ENST00000518604 DDX56Q9NY93 547 aaKnown RBP6.18□□□□□ -1.42
SQLE-202ENST00000518604 BTBD7Q9P203 1132 aa6.18□□□□□ -1.42
SQLE-202ENST00000518604 RASSF10A6NK89 507 aa6.17□□□□□ -1.42
SQLE-202ENST00000518604 ZNF839A8K0R7 811 aa6.17□□□□□ -1.42
SQLE-202ENST00000518604 K7ESF4 209 aa6.17□□□□□ -1.42
SQLE-202ENST00000518604 PAX4O43316 350 aa6.17□□□□□ -1.42
SQLE-202ENST00000518604 RAB11FIP3O75154 756 aa6.17□□□□□ -1.42
SQLE-202ENST00000518604 CYP7B1O75881 506 aa6.17□□□□□ -1.42
SQLE-202ENST00000518604 MMEP08473 750 aa6.17□□□□□ -1.42
SQLE-202ENST00000518604 HSP90B1P14625 803 aaKnown RBP6.17□□□□□ -1.42
SQLE-202ENST00000518604 PTGS1P23219 599 aa6.17□□□□□ -1.42
SQLE-202ENST00000518604 PTX3P26022 381 aaPredicted RBP6.17□□□□□ -1.42
SQLE-202ENST00000518604 NCKAP1LP55160 1127 aa6.17□□□□□ -1.42
SQLE-202ENST00000518604 PFKPQ01813 784 aa6.17□□□□□ -1.42
SQLE-202ENST00000518604 BROXQ5VW32 411 aa6.17□□□□□ -1.42
SQLE-202ENST00000518604 FRMD7Q6ZUT3 714 aa6.17□□□□□ -1.42
SQLE-202ENST00000518604 LHFPL2Q6ZUX7 228 aa6.17□□□□□ -1.42
SQLE-202ENST00000518604 SYDE1Q6ZW31 735 aaPredicted RBP6.17□□□□□ -1.42
SQLE-202ENST00000518604 TTLL6Q8N841 843 aa6.17□□□□□ -1.42
SQLE-202ENST00000518604 LINC00482Q8N8I6 264 aa6.17□□□□□ -1.42
SQLE-202ENST00000518604 DTX3Q8N9I9 347 aa6.17□□□□□ -1.42
SQLE-202ENST00000518604 HIPK4Q8NE63 616 aa6.17□□□□□ -1.42
SQLE-202ENST00000518604 SIGLEC10Q96LC7 697 aa6.17□□□□□ -1.42
SQLE-202ENST00000518604 SGPP1Q9BX95 441 aa6.17□□□□□ -1.42
SQLE-202ENST00000518604 ZMAT4Q9H898 229 aa6.17□□□□□ -1.42
SQLE-202ENST00000518604 KCNK12Q9HB15 430 aa6.17□□□□□ -1.42
SQLE-202ENST00000518604 DLL4Q9NR61 685 aa6.17□□□□□ -1.42
SQLE-202ENST00000518604 ETV2O00321 342 aaPredicted RBP6.16□□□□□ -1.42
SQLE-202ENST00000518604 MC3RP41968 323 aa6.16□□□□□ -1.42
SQLE-202ENST00000518604 EPHB3P54753 998 aa6.16□□□□□ -1.42
SQLE-202ENST00000518604 CAP1Q01518 475 aa6.16□□□□□ -1.42
SQLE-202ENST00000518604 EXOSC10Q01780 885 aaKnown RBP6.16□□□□□ -1.42
SQLE-202ENST00000518604 LCE1DQ5T752 114 aa6.16□□□□□ -1.42
SQLE-202ENST00000518604 FERMT3Q86UX7 667 aa6.16□□□□□ -1.42
SQLE-202ENST00000518604 PHYKPLQ8IUZ5 450 aa6.16□□□□□ -1.42
SQLE-202ENST00000518604 KYQ8NBH2 561 aa6.16□□□□□ -1.42
SQLE-202ENST00000518604 CALML6Q8TD86 181 aa6.16□□□□□ -1.42
SQLE-202ENST00000518604 FOXRED1Q96CU9 486 aaPredicted RBP6.16□□□□□ -1.42
SQLE-202ENST00000518604 SLC38A3Q99624 504 aa6.16□□□□□ -1.42
SQLE-202ENST00000518604 FOXB1Q99853 325 aa6.16□□□□□ -1.42
SQLE-202ENST00000518604 ZDHHC5Q9C0B5 715 aa6.16□□□□□ -1.42
SQLE-202ENST00000518604 GALNT8Q9NY28 637 aa6.16□□□□□ -1.42
SQLE-202ENST00000518604 NOC2LQ9Y3T9 749 aaKnown RBP6.16□□□□□ -1.42
SQLE-202ENST00000518604 RNF114Q9Y508 228 aa6.16□□□□□ -1.42
SQLE-202ENST00000518604 IRAK3Q9Y616 596 aa6.16□□□□□ -1.42
SQLE-202ENST00000518604 WASHC2CQ9Y4E1 1318 aa6.16□□□□□ -1.42
SQLE-202ENST00000518604 UBA6A0AVT1 1052 aaPredicted RBP6.15□□□□□ -1.42
SQLE-202ENST00000518604 PRAMEF22A3QJZ6 481 aa6.15□□□□□ -1.42
SQLE-202ENST00000518604 CHGBP05060 677 aa6.15□□□□□ -1.42
SQLE-202ENST00000518604 PDGFRBP09619 1106 aa6.15□□□□□ -1.42
SQLE-202ENST00000518604 ITGA1P56199 1179 aa6.15□□□□□ -1.42
SQLE-202ENST00000518604 TTC38Q5R3I4 469 aa6.15□□□□□ -1.42
SQLE-202ENST00000518604 PRAMEF18Q5VWM3 479 aa6.15□□□□□ -1.42
SQLE-202ENST00000518604 TIGD7Q6NT04 549 aaPredicted RBP6.15□□□□□ -1.42
SQLE-202ENST00000518604 ESRP1Q6NXG1 681 aaKnown RBP6.15□□□□□ -1.42
SQLE-202ENST00000518604 DPP8Q6V1X1 898 aaPredicted RBP6.15□□□□□ -1.42
SQLE-202ENST00000518604 LIPIQ6XZB0 460 aa6.15□□□□□ -1.42
SQLE-202ENST00000518604 HDGFL2Q7Z4V5 671 aaPredicted RBP6.15□□□□□ -1.42
SQLE-202ENST00000518604 RTN4RL1Q86UN2 441 aaPredicted RBP6.15□□□□□ -1.42
SQLE-202ENST00000518604 CILP2Q8IUL8 1156 aa6.15□□□□□ -1.42
SQLE-202ENST00000518604 CLRN3Q8NCR9 226 aa6.15□□□□□ -1.42
SQLE-202ENST00000518604 MAML3Q96JK9 1138 aa6.15□□□□□ -1.42
SQLE-202ENST00000518604 CLIC6Q96NY7 704 aa6.15□□□□□ -1.42
SQLE-202ENST00000518604 CEP89Q96ST8 783 aa6.15□□□□□ -1.42
SQLE-202ENST00000518604 GORASP1Q9BQQ3 440 aa6.15□□□□□ -1.42
SQLE-202ENST00000518604 C11orf84Q9BUA3 381 aaPredicted RBP6.15□□□□□ -1.42
SQLE-202ENST00000518604 INCENPQ9NQS7 918 aa6.15□□□□□ -1.42
SQLE-202ENST00000518604 KCNG1Q9UIX4 513 aa6.15□□□□□ -1.42
SQLE-202ENST00000518604 NFIBO00712 420 aa6.14□□□□□ -1.43
SQLE-202ENST00000518604 MAFGO15525 162 aa6.14□□□□□ -1.43
SQLE-202ENST00000518604 MPIG6BO95866 241 aa6.14□□□□□ -1.43
SQLE-202ENST00000518604 EVA1CP58658 441 aa6.14□□□□□ -1.43
SQLE-202ENST00000518604 ALDH6A1Q02252 535 aaKnown RBP6.14□□□□□ -1.43
SQLE-202ENST00000518604 ROM1Q03395 351 aa6.14□□□□□ -1.43
SQLE-202ENST00000518604 SKIDA1Q1XH10 827 aa6.14□□□□□ -1.43
SQLE-202ENST00000518604 TMC5Q6UXY8 1006 aa6.14□□□□□ -1.43
SQLE-202ENST00000518604 CXXC5Q7LFL8 322 aaKnown RBP6.14□□□□□ -1.43
SQLE-202ENST00000518604 POU5F2Q8N7G0 328 aa6.14□□□□□ -1.43
SQLE-202ENST00000518604 C7orf31Q8N865 590 aa6.14□□□□□ -1.43
SQLE-202ENST00000518604 AHCYL2Q96HN2 611 aaKnown RBP6.14□□□□□ -1.43
SQLE-202ENST00000518604 BTBD2Q9BX70 525 aa6.14□□□□□ -1.43
SQLE-202ENST00000518604 WNT8AQ9H1J5 351 aa6.14□□□□□ -1.43
SQLE-202ENST00000518604 SLC39A2Q9NP94 309 aa6.14□□□□□ -1.43
SQLE-202ENST00000518604 ARHGAP20Q9P2F6 1191 aa6.14□□□□□ -1.43
SQLE-202ENST00000518604 WASF3Q9UPY6 502 aa6.14□□□□□ -1.43
SQLE-202ENST00000518604 SPEF1Q9Y4P9 236 aa6.14□□□□□ -1.43
SQLE-202ENST00000518604 TCAF2A6NFQ2 919 aa6.13□□□□□ -1.43
SQLE-202ENST00000518604 MAFO75444 373 aaPredicted RBP6.13□□□□□ -1.43
SQLE-202ENST00000518604 PRKD3O94806 890 aa6.13□□□□□ -1.43
SQLE-202ENST00000518604 ECE1P42892 770 aa6.13□□□□□ -1.43
SQLE-202ENST00000518604 HTRA3P83110 453 aa6.13□□□□□ -1.43
SQLE-202ENST00000518604 ADAM9Q13443 819 aa6.13□□□□□ -1.43
SQLE-202ENST00000518604 BRDTQ58F21 947 aaPredicted RBP6.13□□□□□ -1.43
SQLE-202ENST00000518604 ESPNLQ6ZVH7 1005 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms