RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 ZNF76P36508 570 aa12.05□□□□□ -0.48
PDGFRB-203ENST00000517660 SREBF1P36956 1147 aa12.05□□□□□ -0.48
PDGFRB-203ENST00000517660 ADAM17P78536 824 aa12.05□□□□□ -0.48
PDGFRB-203ENST00000517660 ARHGAP4P98171 946 aa12.05□□□□□ -0.48
PDGFRB-203ENST00000517660 MBTPS1Q14703 1052 aa12.05□□□□□ -0.48
PDGFRB-203ENST00000517660 PKN1Q16512 942 aa12.05□□□□□ -0.48
PDGFRB-203ENST00000517660 JAKMIP3Q5VZ66 844 aa12.05□□□□□ -0.48
PDGFRB-203ENST00000517660 GLG1Q92896 1179 aa12.05□□□□□ -0.48
PDGFRB-203ENST00000517660 TGS1Q96RS0 853 aaKnown RBP12.05□□□□□ -0.48
PDGFRB-203ENST00000517660 SDF4Q9BRK5 362 aa12.05□□□□□ -0.48
PDGFRB-203ENST00000517660 C17orf80Q9BSJ5 609 aa12.05□□□□□ -0.48
PDGFRB-203ENST00000517660 ZMYND12Q9H0C1 365 aa12.05□□□□□ -0.48
PDGFRB-203ENST00000517660 JPH1Q9HDC5 661 aaPredicted RBP12.05□□□□□ -0.48
PDGFRB-203ENST00000517660 ERAP1Q9NZ08 941 aa12.05□□□□□ -0.48
PDGFRB-203ENST00000517660 SLC9A2Q9UBY0 812 aa12.05□□□□□ -0.48
PDGFRB-203ENST00000517660 CYP46A1Q9Y6A2 500 aa12.05□□□□□ -0.48
PDGFRB-203ENST00000517660 NFASCO94856 1347 aa12.05□□□□□ -0.48
PDGFRB-203ENST00000517660 NID2Q14112 1375 aa12.05□□□□□ -0.48
PDGFRB-203ENST00000517660 PROB1E7EW31 1015 aa12.04□□□□□ -0.48
PDGFRB-203ENST00000517660 CYP3A4P08684 503 aa12.04□□□□□ -0.48
PDGFRB-203ENST00000517660 IFNAR1P17181 557 aa12.04□□□□□ -0.48
PDGFRB-203ENST00000517660 GNA11P29992 359 aa12.04□□□□□ -0.48
PDGFRB-203ENST00000517660 NTRK3Q16288 839 aa12.04□□□□□ -0.48
PDGFRB-203ENST00000517660 TRIM67Q6ZTA4 783 aa12.04□□□□□ -0.48
PDGFRB-203ENST00000517660 NIPA1Q7RTP0 329 aa12.04□□□□□ -0.48
PDGFRB-203ENST00000517660 LMBR1Q8WVP7 490 aa12.04□□□□□ -0.48
PDGFRB-203ENST00000517660 TNPO1Q92973 898 aaKnown RBP12.04□□□□□ -0.48
PDGFRB-203ENST00000517660 PHKBQ93100 1093 aa12.04□□□□□ -0.48
PDGFRB-203ENST00000517660 PBXIP1Q96AQ6 731 aa12.04□□□□□ -0.48
PDGFRB-203ENST00000517660 PABPC5Q96DU9 382 aaKnown RBP12.04□□□□□ -0.48
PDGFRB-203ENST00000517660 RNF26Q9BY78 433 aaPredicted RBP12.04□□□□□ -0.48
PDGFRB-203ENST00000517660 AZI2Q9H6S1 392 aa12.04□□□□□ -0.48
PDGFRB-203ENST00000517660 AGO4Q9HCK5 861 aaKnown RBP12.04□□□□□ -0.48
PDGFRB-203ENST00000517660 RRN3P2A6NIE6 340 aa12.03□□□□□ -0.48
PDGFRB-203ENST00000517660 GJB5O95377 273 aa12.03□□□□□ -0.48
PDGFRB-203ENST00000517660 ACTR2P61160 394 aa12.03□□□□□ -0.48
PDGFRB-203ENST00000517660 CCT2P78371 535 aaKnown RBP12.03□□□□□ -0.48
PDGFRB-203ENST00000517660 DLX2Q07687 328 aaPredicted RBP12.03□□□□□ -0.48
PDGFRB-203ENST00000517660 PPFIA1Q13136 1202 aa12.03□□□□□ -0.48
PDGFRB-203ENST00000517660 TOB2Q14106 344 aaPredicted RBP12.03□□□□□ -0.48
PDGFRB-203ENST00000517660 SMAD2Q15796 467 aaKnown RBP12.03□□□□□ -0.48
PDGFRB-203ENST00000517660 TCEAL5Q5H9L2 206 aa12.03□□□□□ -0.48
PDGFRB-203ENST00000517660 FAM26DQ5JW98 314 aa12.03□□□□□ -0.48
PDGFRB-203ENST00000517660 TAF2Q6P1X5 1199 aa12.03□□□□□ -0.48
PDGFRB-203ENST00000517660 RPAINQ86UA6 219 aa12.03□□□□□ -0.48
PDGFRB-203ENST00000517660 PLA2G4DQ86XP0 818 aa12.03□□□□□ -0.48
PDGFRB-203ENST00000517660 DBF4BQ8NFT6 615 aa12.03□□□□□ -0.48
PDGFRB-203ENST00000517660 BICD2Q8TD16 824 aa12.03□□□□□ -0.48
PDGFRB-203ENST00000517660 SEPT8Q92599 483 aa12.03□□□□□ -0.48
PDGFRB-203ENST00000517660 MRPL38Q96DV4 380 aaKnown RBP12.03□□□□□ -0.48
PDGFRB-203ENST00000517660 ZNF274Q96GC6 653 aaPredicted RBP12.03□□□□□ -0.48
PDGFRB-203ENST00000517660 PCYT2Q99447 389 aa12.03□□□□□ -0.48
PDGFRB-203ENST00000517660 PRRX2Q99811 253 aa12.03□□□□□ -0.48
PDGFRB-203ENST00000517660 ZBED2Q9BTP6 218 aa12.03□□□□□ -0.48
PDGFRB-203ENST00000517660 SLC26A6Q9BXS9 759 aa12.03□□□□□ -0.48
PDGFRB-203ENST00000517660 UPF3BQ9BZI7 483 aaKnown RBP12.03□□□□□ -0.48
PDGFRB-203ENST00000517660 MED19A0JLT2 244 aaPredicted RBP12.02□□□□□ -0.49
PDGFRB-203ENST00000517660 MBLAC1A4D2B0 266 aaPredicted RBP12.02□□□□□ -0.49
PDGFRB-203ENST00000517660 ATG7O95352 703 aa12.02□□□□□ -0.49
PDGFRB-203ENST00000517660 CTSHP09668 335 aa12.02□□□□□ -0.49
PDGFRB-203ENST00000517660 MARK3P27448 753 aa12.02□□□□□ -0.49
PDGFRB-203ENST00000517660 STAT5BP51692 787 aa12.02□□□□□ -0.49
PDGFRB-203ENST00000517660 ITGB3BPQ13352 177 aaPredicted RBP12.02□□□□□ -0.49
PDGFRB-203ENST00000517660 GRIK4Q16099 956 aa12.02□□□□□ -0.49
PDGFRB-203ENST00000517660 PLEKHG4Q58EX7 1191 aa12.02□□□□□ -0.49
PDGFRB-203ENST00000517660 PLPPR4Q7Z2D5 763 aa12.02□□□□□ -0.49
PDGFRB-203ENST00000517660 RSPH3Q86UC2 560 aa12.02□□□□□ -0.49
PDGFRB-203ENST00000517660 TRIM22Q8IYM9 498 aa12.02□□□□□ -0.49
PDGFRB-203ENST00000517660 REXO1Q8N1G1 1221 aaKnown RBP12.02□□□□□ -0.49
PDGFRB-203ENST00000517660 FBXL6Q8N531 539 aa12.02□□□□□ -0.49
PDGFRB-203ENST00000517660 CCDC148Q8NFR7 591 aa12.02□□□□□ -0.49
PDGFRB-203ENST00000517660 CRYGNQ8WXF5 182 aa12.02□□□□□ -0.49
PDGFRB-203ENST00000517660 RAD9AQ99638 391 aa12.02□□□□□ -0.49
PDGFRB-203ENST00000517660 NCOA5Q9HCD5 579 aaKnown RBP12.02□□□□□ -0.49
PDGFRB-203ENST00000517660 SH3GLB2Q9NR46 395 aa12.02□□□□□ -0.49
PDGFRB-203ENST00000517660 PDRG1Q9NUG6 133 aa12.02□□□□□ -0.49
PDGFRB-203ENST00000517660 PRR23AA6NEV1 266 aa12.01□□□□□ -0.49
PDGFRB-203ENST00000517660 FAM86B1E9PN63 330 aa12.01□□□□□ -0.49
PDGFRB-203ENST00000517660 CPLX1O14810 134 aa12.01□□□□□ -0.49
PDGFRB-203ENST00000517660 ADAMTS3O15072 1205 aa12.01□□□□□ -0.49
PDGFRB-203ENST00000517660 MBTPS2O43462 519 aa12.01□□□□□ -0.49
PDGFRB-203ENST00000517660 PPFIA3O75145 1194 aa12.01□□□□□ -0.49
PDGFRB-203ENST00000517660 AMHP03971 560 aa12.01□□□□□ -0.49
PDGFRB-203ENST00000517660 FAM86B2P0C5J1 330 aa12.01□□□□□ -0.49
PDGFRB-203ENST00000517660 INSRRP14616 1297 aa12.01□□□□□ -0.49
PDGFRB-203ENST00000517660 CIITAP33076 1130 aa12.01□□□□□ -0.49
PDGFRB-203ENST00000517660 SLC26A2P50443 739 aa12.01□□□□□ -0.49
PDGFRB-203ENST00000517660 SSRP1Q08945 709 aaKnown RBP12.01□□□□□ -0.49
PDGFRB-203ENST00000517660 CTC1Q2NKJ3 1217 aa12.01□□□□□ -0.49
PDGFRB-203ENST00000517660 MARCH8Q5T0T0 291 aa12.01□□□□□ -0.49
PDGFRB-203ENST00000517660 CPLX2Q6PUV4 134 aaKnown RBP12.01□□□□□ -0.49
PDGFRB-203ENST00000517660 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.01□□□□□ -0.49
PDGFRB-203ENST00000517660 RUFY4Q6ZNE9 571 aa12.01□□□□□ -0.49
PDGFRB-203ENST00000517660 FBXO22Q8NEZ5 403 aa12.01□□□□□ -0.49
PDGFRB-203ENST00000517660 ATOH1Q92858 354 aaPredicted RBP12.01□□□□□ -0.49
PDGFRB-203ENST00000517660 TUBE1Q9UJT0 475 aa12.01□□□□□ -0.49
PDGFRB-203ENST00000517660 CACNA1HO95180 2353 aa12□□□□□ -0.49
PDGFRB-203ENST00000517660 MYH7BA7E2Y1 1941 aa12□□□□□ -0.49
PDGFRB-203ENST00000517660 IGLV3-22A0A075B6J6 115 aa12□□□□□ -0.49
PDGFRB-203ENST00000517660 IGKV6D-21A0A0A0MT36 114 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms