RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 C4orf19Q8IY42 314 aa11.09□□□□□ -0.63
CLN8-202ENST00000517514 PCSK9Q8NBP7 692 aaKnown RBP11.09□□□□□ -0.63
CLN8-202ENST00000517514 SNX29Q8TEQ0 813 aa11.09□□□□□ -0.63
CLN8-202ENST00000517514 CTAGE1Q96RT6 745 aa11.09□□□□□ -0.63
CLN8-202ENST00000517514 SMARCAD1Q9H4L7 1026 aa11.09□□□□□ -0.63
CLN8-202ENST00000517514 TUT1Q9H6E5 874 aaKnown RBP11.09□□□□□ -0.63
CLN8-202ENST00000517514 BLOC1S4Q9NUP1 217 aa11.09□□□□□ -0.63
CLN8-202ENST00000517514 HPSEQ9Y251 543 aa11.09□□□□□ -0.63
CLN8-202ENST00000517514 SIP14410 1827 aa11.08□□□□□ -0.64
CLN8-202ENST00000517514 A0A1W2PQ27 194 aa11.08□□□□□ -0.64
CLN8-202ENST00000517514 A0A1W2PQ64 194 aa11.08□□□□□ -0.64
CLN8-202ENST00000517514 A0A1W2PQD8 194 aa11.08□□□□□ -0.64
CLN8-202ENST00000517514 BACH1O14867 736 aa11.08□□□□□ -0.64
CLN8-202ENST00000517514 CMA1P23946 247 aa11.08□□□□□ -0.64
CLN8-202ENST00000517514 CDK7P50613 346 aa11.08□□□□□ -0.64
CLN8-202ENST00000517514 ADAM17P78536 824 aa11.08□□□□□ -0.64
CLN8-202ENST00000517514 TARBP2Q15633 366 aaKnown RBP11.08□□□□□ -0.64
CLN8-202ENST00000517514 E2F4Q16254 413 aa11.08□□□□□ -0.64
CLN8-202ENST00000517514 KIAA0753Q2KHM9 967 aa11.08□□□□□ -0.64
CLN8-202ENST00000517514 MARCH8Q5T0T0 291 aa11.08□□□□□ -0.64
CLN8-202ENST00000517514 TPH2Q8IWU9 490 aa11.08□□□□□ -0.64
CLN8-202ENST00000517514 ANKLE1Q8NAG6 615 aa11.08□□□□□ -0.64
CLN8-202ENST00000517514 NEK9Q8TD19 979 aa11.08□□□□□ -0.64
CLN8-202ENST00000517514 PIGOQ8TEQ8 1089 aa11.08□□□□□ -0.64
CLN8-202ENST00000517514 TRAPPC12Q8WVT3 735 aa11.08□□□□□ -0.64
CLN8-202ENST00000517514 GLG1Q92896 1179 aa11.08□□□□□ -0.64
CLN8-202ENST00000517514 ZBTB10Q96DT7 871 aa11.08□□□□□ -0.64
CLN8-202ENST00000517514 PLIN2Q99541 437 aa11.08□□□□□ -0.64
CLN8-202ENST00000517514 SH2D3AQ9BRG2 576 aa11.08□□□□□ -0.64
CLN8-202ENST00000517514 TMEM106CQ9BVX2 250 aa11.08□□□□□ -0.64
CLN8-202ENST00000517514 ZSWIM4Q9H7M6 989 aa11.08□□□□□ -0.64
CLN8-202ENST00000517514 LMBRD1Q9NUN5 540 aa11.08□□□□□ -0.64
CLN8-202ENST00000517514 ERAP1Q9NZ08 941 aa11.08□□□□□ -0.64
CLN8-202ENST00000517514 TNRC18O15417 2968 aaPredicted RBP11.08□□□□□ -0.64
CLN8-202ENST00000517514 A0A1B0GVL5 298 aa11.07□□□□□ -0.64
CLN8-202ENST00000517514 KBTBD13C9JR72 458 aa11.07□□□□□ -0.64
CLN8-202ENST00000517514 E9PMD0 336 aa11.07□□□□□ -0.64
CLN8-202ENST00000517514 ZEB2O60315 1214 aa11.07□□□□□ -0.64
CLN8-202ENST00000517514 OATP04181 439 aa11.07□□□□□ -0.64
CLN8-202ENST00000517514 PLCG1P19174 1290 aa11.07□□□□□ -0.64
CLN8-202ENST00000517514 NPEPPSP55786 919 aa11.07□□□□□ -0.64
CLN8-202ENST00000517514 SOX10P56693 466 aa11.07□□□□□ -0.64
CLN8-202ENST00000517514 ZNF200P98182 395 aaPredicted RBP11.07□□□□□ -0.64
CLN8-202ENST00000517514 BRDTQ58F21 947 aaPredicted RBP11.07□□□□□ -0.64
CLN8-202ENST00000517514 FAM160B1Q5W0V3 765 aa11.07□□□□□ -0.64
CLN8-202ENST00000517514 KRT79Q5XKE5 535 aa11.07□□□□□ -0.64
CLN8-202ENST00000517514 PLA2G4FQ68DD2 849 aa11.07□□□□□ -0.64
CLN8-202ENST00000517514 TNS4Q8IZW8 715 aa11.07□□□□□ -0.64
CLN8-202ENST00000517514 ENGASEQ8NFI3 743 aa11.07□□□□□ -0.64
CLN8-202ENST00000517514 ATP8B4Q8TF62 1192 aa11.07□□□□□ -0.64
CLN8-202ENST00000517514 PAWRQ96IZ0 340 aaKnown RBP11.07□□□□□ -0.64
CLN8-202ENST00000517514 NIFKQ9BYG3 293 aaKnown RBP11.07□□□□□ -0.64
CLN8-202ENST00000517514 PANK2Q9BZ23 570 aa11.07□□□□□ -0.64
CLN8-202ENST00000517514 RAB34Q9BZG1 259 aa11.07□□□□□ -0.64
CLN8-202ENST00000517514 PDLIM7Q9NR12 457 aa11.07□□□□□ -0.64
CLN8-202ENST00000517514 DDX19AQ9NUU7 478 aaKnown RBP11.07□□□□□ -0.64
CLN8-202ENST00000517514 HDAC6Q9UBN7 1215 aa11.07□□□□□ -0.64
CLN8-202ENST00000517514 TCEAL9Q9UHQ7 104 aa11.07□□□□□ -0.64
CLN8-202ENST00000517514 KIAA1024Q9UPX6 916 aa11.07□□□□□ -0.64
CLN8-202ENST00000517514 DDX11L8A8MPP1 907 aa11.06□□□□□ -0.64
CLN8-202ENST00000517514 SLC26A4O43511 780 aa11.06□□□□□ -0.64
CLN8-202ENST00000517514 CABYRO75952 493 aa11.06□□□□□ -0.64
CLN8-202ENST00000517514 SMIM10L2AP0DMW4 78 aa11.06□□□□□ -0.64
CLN8-202ENST00000517514 SMIM10L2BP0DMW5 78 aa11.06□□□□□ -0.64
CLN8-202ENST00000517514 INSRRP14616 1297 aa11.06□□□□□ -0.64
CLN8-202ENST00000517514 PFKFB1P16118 471 aa11.06□□□□□ -0.64
CLN8-202ENST00000517514 LIG1P18858 919 aa11.06□□□□□ -0.64
CLN8-202ENST00000517514 MUTP22033 750 aa11.06□□□□□ -0.64
CLN8-202ENST00000517514 YWHABP31946 246 aaKnown RBP11.06□□□□□ -0.64
CLN8-202ENST00000517514 UBA7P41226 1012 aa11.06□□□□□ -0.64
CLN8-202ENST00000517514 SLC26A2P50443 739 aa11.06□□□□□ -0.64
CLN8-202ENST00000517514 NDUFA8P51970 172 aa11.06□□□□□ -0.64
CLN8-202ENST00000517514 SNW1Q13573 536 aaKnown RBP11.06□□□□□ -0.64
CLN8-202ENST00000517514 ITGA7Q13683 1181 aa11.06□□□□□ -0.64
CLN8-202ENST00000517514 SNX17Q15036 470 aa11.06□□□□□ -0.64
CLN8-202ENST00000517514 XKR3Q5GH77 459 aa11.06□□□□□ -0.64
CLN8-202ENST00000517514 HAUS3Q68CZ6 603 aa11.06□□□□□ -0.64
CLN8-202ENST00000517514 GDF6Q6KF10 455 aaPredicted RBP11.06□□□□□ -0.64
CLN8-202ENST00000517514 TRMT1LQ7Z2T5 733 aaKnown RBP11.06□□□□□ -0.64
CLN8-202ENST00000517514 SESTD1Q86VW0 696 aa11.06□□□□□ -0.64
CLN8-202ENST00000517514 LINC01465Q8N7H1 131 aa11.06□□□□□ -0.64
CLN8-202ENST00000517514 BBXQ8WY36 941 aaPredicted RBP11.06□□□□□ -0.64
CLN8-202ENST00000517514 ATP6V0A1Q93050 837 aa11.06□□□□□ -0.64
CLN8-202ENST00000517514 MTRQ99707 1265 aa11.06□□□□□ -0.64
CLN8-202ENST00000517514 SENP6Q9GZR1 1112 aaPredicted RBP11.06□□□□□ -0.64
CLN8-202ENST00000517514 AZI2Q9H6S1 392 aa11.06□□□□□ -0.64
CLN8-202ENST00000517514 SETD4Q9NVD3 440 aa11.06□□□□□ -0.64
CLN8-202ENST00000517514 MYH11P35749 1972 aa11.05□□□□□ -0.64
CLN8-202ENST00000517514 MBLAC1A4D2B0 266 aaPredicted RBP11.05□□□□□ -0.64
CLN8-202ENST00000517514 ARVCFO00192 962 aa11.05□□□□□ -0.64
CLN8-202ENST00000517514 ACTN4O43707 911 aaKnown RBP11.05□□□□□ -0.64
CLN8-202ENST00000517514 HBP1O60381 514 aa11.05□□□□□ -0.64
CLN8-202ENST00000517514 PRPF40AO75400 957 aaKnown RBP11.05□□□□□ -0.64
CLN8-202ENST00000517514 EYA4O95677 639 aa11.05□□□□□ -0.64
CLN8-202ENST00000517514 CAPN2P17655 700 aa11.05□□□□□ -0.64
CLN8-202ENST00000517514 RARRES1P49788 294 aa11.05□□□□□ -0.64
CLN8-202ENST00000517514 SLC12A3P55017 1021 aa11.05□□□□□ -0.64
CLN8-202ENST00000517514 MKRN4PQ13434 485 aaPredicted RBP11.05□□□□□ -0.64
CLN8-202ENST00000517514 ZRSR1Q15695 479 aaKnown RBP11.05□□□□□ -0.64
CLN8-202ENST00000517514 GRIK4Q16099 956 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms