RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 RFPL3O75679 317 aa7.72□□□□□ -1.17
SCARNA1-201ENST00000517138 NPTXRO95502 500 aa7.72□□□□□ -1.17
SCARNA1-201ENST00000517138 HERVK_113P62684 666 aa7.72□□□□□ -1.17
SCARNA1-201ENST00000517138 DDX53Q86TM3 631 aaKnown RBP7.72□□□□□ -1.17
SCARNA1-201ENST00000517138 HOMER1Q86YM7 354 aa7.72□□□□□ -1.17
SCARNA1-201ENST00000517138 KBTBD2Q8IY47 623 aa7.72□□□□□ -1.17
SCARNA1-201ENST00000517138 LGI4Q8N135 537 aa7.72□□□□□ -1.17
SCARNA1-201ENST00000517138 GBP4Q96PP9 640 aa7.72□□□□□ -1.17
SCARNA1-201ENST00000517138 PTPN18Q99952 460 aa7.72□□□□□ -1.17
SCARNA1-201ENST00000517138 PRAMEF22A3QJZ6 481 aa7.71□□□□□ -1.18
SCARNA1-201ENST00000517138 H0Y858 1186 aa7.71□□□□□ -1.18
SCARNA1-201ENST00000517138 FOXP2O15409 715 aa7.71□□□□□ -1.18
SCARNA1-201ENST00000517138 PLP2Q04941 152 aa7.71□□□□□ -1.18
SCARNA1-201ENST00000517138 CDCA2Q69YH5 1023 aaPredicted RBP7.71□□□□□ -1.18
SCARNA1-201ENST00000517138 Q6ZUG5 572 aa7.71□□□□□ -1.18
SCARNA1-201ENST00000517138 KLHL36Q8N4N3 616 aa7.71□□□□□ -1.18
SCARNA1-201ENST00000517138 APPBP2Q92624 585 aa7.71□□□□□ -1.18
SCARNA1-201ENST00000517138 RBM15Q96T37 977 aaKnown RBP eCLIP7.71□□□□□ -1.18
SCARNA1-201ENST00000517138 GALNT8Q9NY28 637 aa7.71□□□□□ -1.18
SCARNA1-201ENST00000517138 ADAM29Q9UKF5 820 aa7.71□□□□□ -1.18
SCARNA1-201ENST00000517138 PTPDC1A2A3K4 754 aa7.7□□□□□ -1.18
SCARNA1-201ENST00000517138 B4GALT4O60513 344 aa7.7□□□□□ -1.18
SCARNA1-201ENST00000517138 APPP05067 770 aa7.7□□□□□ -1.18
SCARNA1-201ENST00000517138 CELA3BP08861 270 aa7.7□□□□□ -1.18
SCARNA1-201ENST00000517138 ZNF888P0CJ79 500 aaPredicted RBP7.7□□□□□ -1.18
SCARNA1-201ENST00000517138 CSF2RBP32927 897 aa7.7□□□□□ -1.18
SCARNA1-201ENST00000517138 ADCY8P40145 1251 aa7.7□□□□□ -1.18
SCARNA1-201ENST00000517138 TCEA2Q15560 299 aa7.7□□□□□ -1.18
SCARNA1-201ENST00000517138 BORAQ6PGQ7 559 aa7.7□□□□□ -1.18
SCARNA1-201ENST00000517138 C16orf86Q6ZW13 317 aa7.7□□□□□ -1.18
SCARNA1-201ENST00000517138 LIMS2Q7Z4I7 341 aa7.7□□□□□ -1.18
SCARNA1-201ENST00000517138 FAM124AQ86V42 546 aa7.7□□□□□ -1.18
SCARNA1-201ENST00000517138 CHST14Q8NCH0 376 aa7.7□□□□□ -1.18
SCARNA1-201ENST00000517138 ERCC4Q92889 916 aaPredicted RBP7.7□□□□□ -1.18
SCARNA1-201ENST00000517138 BOCQ9BWV1 1114 aa7.7□□□□□ -1.18
SCARNA1-201ENST00000517138 CHGBP05060 677 aa7.69□□□□□ -1.18
SCARNA1-201ENST00000517138 SDHAP31040 664 aa7.69□□□□□ -1.18
SCARNA1-201ENST00000517138 KRTAP10-2P60368 255 aa7.69□□□□□ -1.18
SCARNA1-201ENST00000517138 CREB3L3Q68CJ9 461 aa7.69□□□□□ -1.18
SCARNA1-201ENST00000517138 DHX37Q8IY37 1157 aaKnown RBP7.69□□□□□ -1.18
SCARNA1-201ENST00000517138 HIPK4Q8NE63 616 aa7.69□□□□□ -1.18
SCARNA1-201ENST00000517138 FOXRED1Q96CU9 486 aaPredicted RBP7.69□□□□□ -1.18
SCARNA1-201ENST00000517138 AJUBAQ96IF1 538 aa7.69□□□□□ -1.18
SCARNA1-201ENST00000517138 SSBP3Q9BWW4 388 aaPredicted RBP7.69□□□□□ -1.18
SCARNA1-201ENST00000517138 MTFR1LQ9H019 292 aa7.69□□□□□ -1.18
SCARNA1-201ENST00000517138 KATNBL1Q9H079 304 aa7.69□□□□□ -1.18
SCARNA1-201ENST00000517138 BARX1Q9HBU1 254 aaPredicted RBP7.69□□□□□ -1.18
SCARNA1-201ENST00000517138 PPP4R1LQ9P1A2 415 aa7.69□□□□□ -1.18
SCARNA1-201ENST00000517138 B4E1Z4 1266 aa7.68□□□□□ -1.18
SCARNA1-201ENST00000517138 CBX4O00257 560 aa7.68□□□□□ -1.18
SCARNA1-201ENST00000517138 PLATP00750 562 aa7.68□□□□□ -1.18
SCARNA1-201ENST00000517138 ITGB3P05106 788 aa7.68□□□□□ -1.18
SCARNA1-201ENST00000517138 CD83Q01151 205 aa7.68□□□□□ -1.18
SCARNA1-201ENST00000517138 TOP3AQ13472 1001 aaPredicted RBP7.68□□□□□ -1.18
SCARNA1-201ENST00000517138 WDR72Q3MJ13 1102 aa7.68□□□□□ -1.18
SCARNA1-201ENST00000517138 CFAP100Q494V2 611 aa7.68□□□□□ -1.18
SCARNA1-201ENST00000517138 KANK2Q63ZY3 851 aa7.68□□□□□ -1.18
SCARNA1-201ENST00000517138 RTN4RL1Q86UN2 441 aaPredicted RBP7.68□□□□□ -1.18
SCARNA1-201ENST00000517138 WNK4Q96J92 1243 aa7.68□□□□□ -1.18
SCARNA1-201ENST00000517138 H2AFY2Q9P0M6 372 aaPredicted RBP7.68□□□□□ -1.18
SCARNA1-201ENST00000517138 GOLGA6L22H0YM25 854 aa7.67□□□□□ -1.18
SCARNA1-201ENST00000517138 KPNA6O60684 536 aa7.67□□□□□ -1.18
SCARNA1-201ENST00000517138 HIP1RO75146 1068 aa7.67□□□□□ -1.18
SCARNA1-201ENST00000517138 CDC45O75419 566 aa7.67□□□□□ -1.18
SCARNA1-201ENST00000517138 ECE1P42892 770 aa7.67□□□□□ -1.18
SCARNA1-201ENST00000517138 KIF11P52732 1056 aa7.67□□□□□ -1.18
SCARNA1-201ENST00000517138 NOLC1Q14978 699 aaKnown RBP eCLIP7.67□□□□□ -1.182e-22■■□□□ 13.6
SCARNA1-201ENST00000517138 STILQ15468 1287 aa7.67□□□□□ -1.18
SCARNA1-201ENST00000517138 DALRD3Q5D0E6 543 aaKnown RBP7.67□□□□□ -1.18
SCARNA1-201ENST00000517138 CNNM4Q6P4Q7 775 aa7.67□□□□□ -1.18
SCARNA1-201ENST00000517138 NXPE1Q8N323 547 aa7.67□□□□□ -1.18
SCARNA1-201ENST00000517138 NINJ1Q92982 152 aa7.67□□□□□ -1.18
SCARNA1-201ENST00000517138 MAGEC2Q9UBF1 373 aaPredicted RBP7.67□□□□□ -1.18
SCARNA1-201ENST00000517138 B4GALT6Q9UBX8 382 aa7.67□□□□□ -1.18
SCARNA1-201ENST00000517138 CDC42EP3Q9UKI2 254 aa7.67□□□□□ -1.18
SCARNA1-201ENST00000517138 TBX22Q9Y458 520 aa7.67□□□□□ -1.18
SCARNA1-201ENST00000517138 ZNF891A8MT65 544 aaPredicted RBP7.66□□□□□ -1.18
SCARNA1-201ENST00000517138 LAMTOR5O43504 91 aa7.66□□□□□ -1.18
SCARNA1-201ENST00000517138 CNOT4O95628 575 aaKnown RBP7.66□□□□□ -1.18
SCARNA1-201ENST00000517138 PTX3P26022 381 aaPredicted RBP7.66□□□□□ -1.18
SCARNA1-201ENST00000517138 POLD1P28340 1107 aa7.66□□□□□ -1.18
SCARNA1-201ENST00000517138 RRADP55042 308 aa7.66□□□□□ -1.18
SCARNA1-201ENST00000517138 PCBP1Q15365 356 aaKnown RBP eCLIP7.66□□□□□ -1.18
SCARNA1-201ENST00000517138 ARHGAP44Q17R89 818 aa7.66□□□□□ -1.18
SCARNA1-201ENST00000517138 CC2D1AQ6P1N0 951 aaPredicted RBP7.66□□□□□ -1.18
SCARNA1-201ENST00000517138 LARP4Q71RC2 724 aaKnown RBP eCLIP7.66□□□□□ -1.18
SCARNA1-201ENST00000517138 LRRTM3Q86VH5 581 aa7.66□□□□□ -1.18
SCARNA1-201ENST00000517138 SYNPOQ8N3V7 929 aa7.66□□□□□ -1.18
SCARNA1-201ENST00000517138 BTBD2Q9BX70 525 aa7.66□□□□□ -1.18
SCARNA1-201ENST00000517138 ASB1Q9Y576 335 aa7.66□□□□□ -1.18
SCARNA1-201ENST00000517138 ZNF536O15090 1300 aa7.66□□□□□ -1.18
SCARNA1-201ENST00000517138 SLC9A1P19634 815 aa7.65□□□□□ -1.18
SCARNA1-201ENST00000517138 PPP2CBP62714 309 aa7.65□□□□□ -1.18
SCARNA1-201ENST00000517138 PPP2CAP67775 309 aa7.65□□□□□ -1.18
SCARNA1-201ENST00000517138 GIMAP6Q6P9H5 292 aa7.65□□□□□ -1.18
SCARNA1-201ENST00000517138 UBE2R2Q712K3 238 aaPredicted RBP7.65□□□□□ -1.18
SCARNA1-201ENST00000517138 RALYLQ86SE5 291 aaKnown RBP7.65□□□□□ -1.18
SCARNA1-201ENST00000517138 NIM1KQ8IY84 436 aa7.65□□□□□ -1.18
SCARNA1-201ENST00000517138 OR10A5Q9H207 317 aa7.65□□□□□ -1.18
SCARNA1-201ENST00000517138 CABP5Q9NP86 173 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms