RNA–Protein interactions for RNA: ENST00000516884.1

SNORA40.15-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 107 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.15-201ENST00000516884 DPP8Q6V1X1 898 aaPredicted RBP3.67□□□□□ -1.82
SNORA40.15-201ENST00000516884 LARP4Q71RC2 724 aaKnown RBP eCLIP3.67□□□□□ -1.82
SNORA40.15-201ENST00000516884 ZNF808Q8N4W9 903 aaPredicted RBP3.67□□□□□ -1.82
SNORA40.15-201ENST00000516884 WNK4Q96J92 1243 aa3.67□□□□□ -1.82
SNORA40.15-201ENST00000516884 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.67□□□□□ -1.82
SNORA40.15-201ENST00000516884 AURKAIP1Q9NWT8 199 aaPredicted RBP3.67□□□□□ -1.82
SNORA40.15-201ENST00000516884 MAN2B1O00754 1011 aa3.66□□□□□ -1.82
SNORA40.15-201ENST00000516884 CDC14BO60729 498 aa3.66□□□□□ -1.82
SNORA40.15-201ENST00000516884 MAFO75444 373 aaPredicted RBP3.66□□□□□ -1.82
SNORA40.15-201ENST00000516884 C4BPAP04003 597 aaKnown RBP3.66□□□□□ -1.82
SNORA40.15-201ENST00000516884 AMY2AP04746 511 aa3.66□□□□□ -1.82
SNORA40.15-201ENST00000516884 AMY2BP19961 511 aa3.66□□□□□ -1.82
SNORA40.15-201ENST00000516884 GJA4P35212 333 aa3.66□□□□□ -1.82
SNORA40.15-201ENST00000516884 FOXL1Q12952 345 aa3.66□□□□□ -1.82
SNORA40.15-201ENST00000516884 GPR19Q15760 415 aa3.66□□□□□ -1.82
SNORA40.15-201ENST00000516884 KANK2Q63ZY3 851 aa3.66□□□□□ -1.82
SNORA40.15-201ENST00000516884 NSMFQ6X4W1 530 aa3.66□□□□□ -1.82
SNORA40.15-201ENST00000516884 C1orf210Q8IVY1 113 aa3.66□□□□□ -1.82
SNORA40.15-201ENST00000516884 NLGN4XQ8N0W4 816 aa3.66□□□□□ -1.82
SNORA40.15-201ENST00000516884 GMLQ99445 158 aa3.66□□□□□ -1.82
SNORA40.15-201ENST00000516884 ALG1Q9BT22 464 aa3.66□□□□□ -1.82
SNORA40.15-201ENST00000516884 CEP72Q9P209 647 aa3.66□□□□□ -1.82
SNORA40.15-201ENST00000516884 NR2E1Q9Y466 385 aa3.66□□□□□ -1.82
SNORA40.15-201ENST00000516884 TRAV20A0A0B4J274 112 aa3.65□□□□□ -1.83
SNORA40.15-201ENST00000516884 KRTAP23-1A1A580 65 aa3.65□□□□□ -1.83
SNORA40.15-201ENST00000516884 ZNF561-AS1K7EIQ3 104 aa3.65□□□□□ -1.83
SNORA40.15-201ENST00000516884 ARVCFO00192 962 aa3.65□□□□□ -1.83
SNORA40.15-201ENST00000516884 TGM1P22735 817 aa3.65□□□□□ -1.83
SNORA40.15-201ENST00000516884 PTGS1P23219 599 aa3.65□□□□□ -1.83
SNORA40.15-201ENST00000516884 HERVK_113P62684 666 aa3.65□□□□□ -1.83
SNORA40.15-201ENST00000516884 IFRD2Q12894 506 aaPredicted RBP3.65□□□□□ -1.83
SNORA40.15-201ENST00000516884 NOLC1Q14978 699 aaKnown RBP eCLIP3.65□□□□□ -1.83
SNORA40.15-201ENST00000516884 YOD1Q5VVQ6 348 aaPredicted RBP3.65□□□□□ -1.83
SNORA40.15-201ENST00000516884 BTBD8Q5XKL5 378 aa3.65□□□□□ -1.83
SNORA40.15-201ENST00000516884 TMEM200BQ69YZ2 307 aa3.65□□□□□ -1.83
SNORA40.15-201ENST00000516884 Q6ZPA2 131 aa3.65□□□□□ -1.83
SNORA40.15-201ENST00000516884 DPH6Q7L8W6 267 aa3.65□□□□□ -1.83
SNORA40.15-201ENST00000516884 GPR135Q8IZ08 494 aa3.65□□□□□ -1.83
SNORA40.15-201ENST00000516884 PCDH19Q8TAB3 1148 aa3.65□□□□□ -1.83
SNORA40.15-201ENST00000516884 HNRNPLLQ8WVV9 542 aaKnown RBP3.65□□□□□ -1.83
SNORA40.15-201ENST00000516884 OR14A2Q96R54 314 aa3.65□□□□□ -1.83
SNORA40.15-201ENST00000516884 BTBD2Q9BX70 525 aa3.65□□□□□ -1.83
SNORA40.15-201ENST00000516884 KIAA1683Q9H0B3 1180 aa3.65□□□□□ -1.83
SNORA40.15-201ENST00000516884 NELFAQ9H3P2 528 aa3.65□□□□□ -1.83
SNORA40.15-201ENST00000516884 INCENPQ9NQS7 918 aa3.65□□□□□ -1.83
SNORA40.15-201ENST00000516884 GALNT8Q9NY28 637 aa3.65□□□□□ -1.83
SNORA40.15-201ENST00000516884 BLACEA4D250 179 aa3.64□□□□□ -1.83
SNORA40.15-201ENST00000516884 ADCY3O60266 1144 aa3.64□□□□□ -1.83
SNORA40.15-201ENST00000516884 PEX11BO96011 259 aa3.64□□□□□ -1.83
SNORA40.15-201ENST00000516884 HMGCRP04035 888 aa3.64□□□□□ -1.83
SNORA40.15-201ENST00000516884 ERCC5P28715 1186 aaPredicted RBP3.64□□□□□ -1.83
SNORA40.15-201ENST00000516884 RRADP55042 308 aa3.64□□□□□ -1.83
SNORA40.15-201ENST00000516884 PAK1Q13153 545 aa3.64□□□□□ -1.83
SNORA40.15-201ENST00000516884 TUBA3CQ13748 450 aa3.64□□□□□ -1.83
SNORA40.15-201ENST00000516884 WDR72Q3MJ13 1102 aa3.64□□□□□ -1.83
SNORA40.15-201ENST00000516884 TUBA3EQ6PEY2 450 aa3.64□□□□□ -1.83
SNORA40.15-201ENST00000516884 ARHGAP36Q6ZRI8 547 aa3.64□□□□□ -1.83
SNORA40.15-201ENST00000516884 USP30Q70CQ3 517 aa3.64□□□□□ -1.83
SNORA40.15-201ENST00000516884 MAMDC2Q7Z304 686 aaPredicted RBP3.64□□□□□ -1.83
SNORA40.15-201ENST00000516884 ADGRE4PQ86SQ3 457 aa3.64□□□□□ -1.83
SNORA40.15-201ENST00000516884 LRRC47Q8N1G4 583 aaKnown RBP3.64□□□□□ -1.83
SNORA40.15-201ENST00000516884 LARP4BQ92615 738 aaKnown RBP3.64□□□□□ -1.83
SNORA40.15-201ENST00000516884 AMNQ9BXJ7 453 aa3.64□□□□□ -1.83
SNORA40.15-201ENST00000516884 CSRNP2Q9H175 543 aa3.64□□□□□ -1.83
SNORA40.15-201ENST00000516884 OR10A2Q9H208 303 aa3.64□□□□□ -1.83
SNORA40.15-201ENST00000516884 PLA2G3Q9NZ20 509 aa3.64□□□□□ -1.83
SNORA40.15-201ENST00000516884 PUF60Q9UHX1 559 aaKnown RBP3.64□□□□□ -1.83
SNORA40.15-201ENST00000516884 A0A087X1B8 175 aa3.63□□□□□ -1.83
SNORA40.15-201ENST00000516884 CLASP2O75122 1294 aaKnown RBP3.63□□□□□ -1.83
SNORA40.15-201ENST00000516884 C6orf222P0C671 652 aaPredicted RBP3.63□□□□□ -1.83
SNORA40.15-201ENST00000516884 KRT4P19013 534 aa3.63□□□□□ -1.83
SNORA40.15-201ENST00000516884 DNAJA1P31689 397 aaKnown RBP3.63□□□□□ -1.83
SNORA40.15-201ENST00000516884 MC4RP32245 332 aa3.63□□□□□ -1.83
SNORA40.15-201ENST00000516884 MSX2P35548 267 aaPredicted RBP3.63□□□□□ -1.83
SNORA40.15-201ENST00000516884 NANOS3P60323 173 aaKnown RBP3.63□□□□□ -1.83
SNORA40.15-201ENST00000516884 ARID5AQ03989 594 aa3.63□□□□□ -1.83
SNORA40.15-201ENST00000516884 GNL2Q13823 731 aaKnown RBP3.63□□□□□ -1.83
SNORA40.15-201ENST00000516884 PCOLCEQ15113 449 aa3.63□□□□□ -1.83
SNORA40.15-201ENST00000516884 SEC23AQ15436 765 aa3.63□□□□□ -1.83
SNORA40.15-201ENST00000516884 ANKS3Q6ZW76 656 aa3.63□□□□□ -1.83
SNORA40.15-201ENST00000516884 C16orf59Q7L2K0 433 aa3.63□□□□□ -1.83
SNORA40.15-201ENST00000516884 ZNF483Q8TF39 744 aaPredicted RBP3.63□□□□□ -1.83
SNORA40.15-201ENST00000516884 PLEKHG4BQ96PX9 1271 aa3.63□□□□□ -1.83
SNORA40.15-201ENST00000516884 AGAP2Q99490 1192 aa3.63□□□□□ -1.83
SNORA40.15-201ENST00000516884 SMURF1Q9HCE7 757 aa3.63□□□□□ -1.83
SNORA40.15-201ENST00000516884 TLR9Q9NR96 1032 aa3.63□□□□□ -1.83
SNORA40.15-201ENST00000516884 ST7Q9NRC1 585 aa3.63□□□□□ -1.83
SNORA40.15-201ENST00000516884 ARHGAP28Q9P2N2 729 aa3.63□□□□□ -1.83
SNORA40.15-201ENST00000516884 CBLCQ9ULV8 474 aa3.63□□□□□ -1.83
SNORA40.15-201ENST00000516884 MSRB2Q9Y3D2 182 aa3.63□□□□□ -1.83
SNORA40.15-201ENST00000516884 ATP23Q9Y6H3 246 aa3.63□□□□□ -1.83
SNORA40.15-201ENST00000516884 A0A0G2JNJ9 132 aa3.62□□□□□ -1.83
SNORA40.15-201ENST00000516884 AQP7O14520 342 aa3.62□□□□□ -1.83
SNORA40.15-201ENST00000516884 SLC26A4O43511 780 aa3.62□□□□□ -1.83
SNORA40.15-201ENST00000516884 PDE6AP16499 860 aa3.62□□□□□ -1.83
SNORA40.15-201ENST00000516884 MAKP20794 623 aa3.62□□□□□ -1.83
SNORA40.15-201ENST00000516884 MRE11P49959 708 aa3.62□□□□□ -1.83
SNORA40.15-201ENST00000516884 KCNQ1P51787 676 aa3.62□□□□□ -1.83
SNORA40.15-201ENST00000516884 LACTBP83111 547 aaPredicted RBP3.62□□□□□ -1.83
SNORA40.15-201ENST00000516884 COL10A1Q03692 680 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms