RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 RAVER1Q8IY67 606 aaKnown RBP4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 CMTR2Q8IYT2 770 aaKnown RBP4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 ABHD4Q8TB40 342 aa4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 ASB15Q8WXK1 588 aa4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 FOXRED1Q96CU9 486 aaPredicted RBP4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 RAX2Q96IS3 184 aa4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 RNF38Q9H0F5 515 aa4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 DTLQ9NZJ0 730 aa4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 BTBD7Q9P203 1132 aa4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 GPR160Q9UJ42 338 aa4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 ZNF180Q9UJW8 692 aa4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 NUMBLQ9Y6R0 609 aa4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 KLHL33A6NCF5 533 aa4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 RASSF10A6NK89 507 aa4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 GOLGA8AA7E2F4 631 aa4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 GOLGA8BA8MQT2 603 aa4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 KDM1AO60341 852 aa4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 CAND2O75155 1236 aa4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 KRT37O76014 449 aa4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 MYBL2P10244 700 aa4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 CCND1P24385 295 aa4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 PTX3P26022 381 aaPredicted RBP4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 SSTR4P31391 388 aa4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 CYP2C19P33261 490 aa4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 IARSP41252 1262 aaKnown RBP4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 MTNR1BP49286 362 aa4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 TMEM132BQ14DG7 1078 aa4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 PDCD1Q15116 288 aa4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 GFOD2Q3B7J2 385 aa4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 TTC38Q5R3I4 469 aa4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 CPZQ66K79 652 aa4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 TIGD7Q6NT04 549 aaPredicted RBP4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 CBLL1Q75N03 491 aa4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 TP53INP2Q8IXH6 220 aa4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 TTC8Q8TAM2 541 aa4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 JPH3Q8WXH2 748 aaPredicted RBP4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 INTS4Q96HW7 963 aaKnown RBP4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 ZNF496Q96IT1 587 aaPredicted RBP4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 PRDM7Q9NQW5 492 aa4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 RIC8BQ9NVN3 520 aa4.37□□□□□ -1.71
RNU6-390P-201ENST00000516259 OR14I1A6ND48 311 aa4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 F8W031 263 aaPredicted RBP4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 ERC2O15083 957 aa4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 GNALP38405 381 aa4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 GPR15P49685 360 aa4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 MANFP55145 182 aaKnown RBP4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 ERVFC1P60507 584 aa4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 ALDH6A1Q02252 535 aaKnown RBP4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 KIR3DS1Q14943 382 aa4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 GJC2Q5T442 439 aaPredicted RBP4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 PGM2L1Q6PCE3 622 aa4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 RPTNQ6XPR3 784 aa4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 CXXC5Q7LFL8 322 aaKnown RBP4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 KCNK18Q7Z418 384 aa4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 AMIGO3Q86WK7 504 aa4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 CXorf67Q86X51 503 aaPredicted RBP4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 C7orf31Q8N865 590 aa4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 ARRDC4Q8NCT1 418 aa4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 CALML6Q8TD86 181 aa4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 TSR2Q969E8 191 aaKnown RBP4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 TOE1Q96GM8 510 aaKnown RBP4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 PAWRQ96IZ0 340 aaKnown RBP4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 KIRREL1Q96J84 757 aa4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 GBP4Q96PP9 640 aa4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 SMAD5Q99717 465 aaKnown RBP4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 ZNF700Q9H0M5 742 aa4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 C19orf44Q9H6X5 657 aa4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 PCMTD2Q9NV79 361 aa4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 MKS1Q9NXB0 559 aa4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 KLHL14Q9P2G3 628 aa4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 MSRAQ9UJ68 235 aa4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 LUC7L2Q9Y383 392 aaKnown RBP4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 IRS2Q9Y4H2 1338 aa4.36□□□□□ -1.71
RNU6-390P-201ENST00000516259 UBA6A0AVT1 1052 aaPredicted RBP4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 ZC3H12DA2A288 527 aaKnown RBP4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 PRAMEF25A6NGN4 478 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 KCNK3O14649 394 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 PCDHGA12O60330 932 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 ADAM23O75077 832 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 ADAMTS4O75173 837 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 PRLP01236 227 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 LRG1P02750 347 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 LTFP02788 710 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 CHGBP05060 677 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 ENO2P09104 434 aaPredicted RBP4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 AGXTP21549 392 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 FBLN1P23142 703 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 SLC5A3P53794 718 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 ADKP55263 362 aaKnown RBP4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 BCAR1P56945 870 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 PRR5P85299 388 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 ROM1Q03395 351 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 MLC1Q15049 377 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 PCBP2Q15366 365 aaKnown RBP eCLIP4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 ABCB5Q2M3G0 1257 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 PLEKHN1Q494U1 663 aaPredicted RBP4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 MINDY4Q4G0A6 757 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 EFCAB2Q5VUJ9 269 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 KIAA1841Q6NSI8 718 aa4.35□□□□□ -1.71
RNU6-390P-201ENST00000516259 ZC3H14Q6PJT7 736 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms