RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 PCDHA2Q9Y5H9 948 aa12.66□□□□□ -0.38
SCARNA16.1-201ENST00000516133 KIF28PB7ZC32 967 aa12.65□□□□□ -0.38
SCARNA16.1-201ENST00000516133 PSMD10O75832 226 aa12.65□□□□□ -0.38
SCARNA16.1-201ENST00000516133 MMP1P03956 469 aa12.65□□□□□ -0.38
SCARNA16.1-201ENST00000516133 IER5Q5VY09 327 aa12.65□□□□□ -0.38
SCARNA16.1-201ENST00000516133 KRT40Q6A162 431 aa12.65□□□□□ -0.38
SCARNA16.1-201ENST00000516133 DNAJB3Q8WWF6 145 aa12.65□□□□□ -0.38
SCARNA16.1-201ENST00000516133 BBXQ8WY36 941 aaPredicted RBP12.65□□□□□ -0.38
SCARNA16.1-201ENST00000516133 SEPT8Q92599 483 aa12.65□□□□□ -0.38
SCARNA16.1-201ENST00000516133 FAM161BQ96MY7 647 aa12.65□□□□□ -0.38
SCARNA16.1-201ENST00000516133 TTYH1Q9H313 450 aaPredicted RBP12.65□□□□□ -0.38
SCARNA16.1-201ENST00000516133 ZNF576Q9H609 170 aa12.65□□□□□ -0.38
SCARNA16.1-201ENST00000516133 NRBP2Q9NSY0 501 aa12.65□□□□□ -0.38
SCARNA16.1-201ENST00000516133 GABBR1Q9UBS5 961 aa12.65□□□□□ -0.38
SCARNA16.1-201ENST00000516133 STXBP5LQ9Y2K9 1186 aa12.65□□□□□ -0.38
SCARNA16.1-201ENST00000516133 PCDHA11Q9Y5I1 949 aa12.65□□□□□ -0.38
SCARNA16.1-201ENST00000516133 SCN5AQ14524 2016 aa12.65□□□□□ -0.38
SCARNA16.1-201ENST00000516133 COL1A2P08123 1366 aa12.65□□□□□ -0.38
SCARNA16.1-201ENST00000516133 SMIM35A0A1B0GVV1 85 aa12.64□□□□□ -0.39
SCARNA16.1-201ENST00000516133 BTBD18B2RXH4 712 aa12.64□□□□□ -0.39
SCARNA16.1-201ENST00000516133 TBX3O15119 743 aa12.64□□□□□ -0.39
SCARNA16.1-201ENST00000516133 MARCH6O60337 910 aa12.64□□□□□ -0.39
SCARNA16.1-201ENST00000516133 CCNT1O60563 726 aaKnown RBP12.64□□□□□ -0.39
SCARNA16.1-201ENST00000516133 CHRNA1P02708 482 aa12.64□□□□□ -0.39
SCARNA16.1-201ENST00000516133 CTSHP09668 335 aa12.64□□□□□ -0.39
SCARNA16.1-201ENST00000516133 ATP4AP20648 1035 aa12.64□□□□□ -0.39
SCARNA16.1-201ENST00000516133 KLRC1P26715 233 aa12.64□□□□□ -0.39
SCARNA16.1-201ENST00000516133 PBX2P40425 430 aa12.64□□□□□ -0.39
SCARNA16.1-201ENST00000516133 MCM2P49736 904 aa12.64□□□□□ -0.39
SCARNA16.1-201ENST00000516133 ST3GAL1Q11201 340 aa12.64□□□□□ -0.39
SCARNA16.1-201ENST00000516133 NR5A1Q13285 461 aa12.64□□□□□ -0.39
SCARNA16.1-201ENST00000516133 PLEKHG4Q58EX7 1191 aa12.64□□□□□ -0.39
SCARNA16.1-201ENST00000516133 MTHFD1LQ6UB35 978 aa12.64□□□□□ -0.39
SCARNA16.1-201ENST00000516133 RUFY4Q6ZNE9 571 aa12.64□□□□□ -0.39
SCARNA16.1-201ENST00000516133 HERC6Q8IVU3 1022 aa12.64□□□□□ -0.39
SCARNA16.1-201ENST00000516133 DIS3L2Q8IYB7 885 aaKnown RBP12.64□□□□□ -0.39
SCARNA16.1-201ENST00000516133 DBF4BQ8NFT6 615 aa12.64□□□□□ -0.39
SCARNA16.1-201ENST00000516133 ETNPPLQ8TBG4 499 aa12.64□□□□□ -0.39
SCARNA16.1-201ENST00000516133 TNFRSF25Q93038 417 aa12.64□□□□□ -0.39
SCARNA16.1-201ENST00000516133 FAM167AQ96KS9 214 aa12.64□□□□□ -0.39
SCARNA16.1-201ENST00000516133 SLC28A3Q9HAS3 691 aa12.64□□□□□ -0.39
SCARNA16.1-201ENST00000516133 CEP131Q9UPN4 1083 aa12.64□□□□□ -0.39
SCARNA16.1-201ENST00000516133 CHD9Q3L8U1 2897 aa12.64□□□□□ -0.39
SCARNA16.1-201ENST00000516133 M0QZ92 97 aa12.63□□□□□ -0.39
SCARNA16.1-201ENST00000516133 MAGEB2O15479 319 aa12.63□□□□□ -0.39
SCARNA16.1-201ENST00000516133 CHMP2AO43633 222 aa12.63□□□□□ -0.39
SCARNA16.1-201ENST00000516133 BAG4O95429 457 aaKnown RBP12.63□□□□□ -0.39
SCARNA16.1-201ENST00000516133 RABGGTBP53611 331 aa12.63□□□□□ -0.39
SCARNA16.1-201ENST00000516133 WDR5P61964 334 aaKnown RBP12.63□□□□□ -0.39
SCARNA16.1-201ENST00000516133 MRPS6P82932 125 aaKnown RBP12.63□□□□□ -0.39
SCARNA16.1-201ENST00000516133 B3GNT9Q6UX72 402 aa12.63□□□□□ -0.39
SCARNA16.1-201ENST00000516133 FAM43BQ6ZT52 329 aaPredicted RBP12.63□□□□□ -0.39
SCARNA16.1-201ENST00000516133 MIER3Q7Z3K6 550 aa12.63□□□□□ -0.39
SCARNA16.1-201ENST00000516133 SLFN12Q8IYM2 578 aa12.63□□□□□ -0.39
SCARNA16.1-201ENST00000516133 USP38Q8NB14 1042 aa12.63□□□□□ -0.39
SCARNA16.1-201ENST00000516133 FAM184AQ8NB25 1140 aa12.63□□□□□ -0.39
SCARNA16.1-201ENST00000516133 TRAPPC12Q8WVT3 735 aa12.63□□□□□ -0.39
SCARNA16.1-201ENST00000516133 APBB2Q92870 758 aa12.63□□□□□ -0.39
SCARNA16.1-201ENST00000516133 C8orf76Q96K31 380 aa12.63□□□□□ -0.39
SCARNA16.1-201ENST00000516133 TBC1D32Q96NH3 1257 aa12.63□□□□□ -0.39
SCARNA16.1-201ENST00000516133 GUCD1Q96NT3 240 aa12.63□□□□□ -0.39
SCARNA16.1-201ENST00000516133 CDX2Q99626 313 aaPredicted RBP12.63□□□□□ -0.39
SCARNA16.1-201ENST00000516133 FAM49AQ9H0Q0 323 aaPredicted RBP12.63□□□□□ -0.39
SCARNA16.1-201ENST00000516133 UNC45AQ9H3U1 944 aa12.63□□□□□ -0.39
SCARNA16.1-201ENST00000516133 KCNMB3Q9NPA1 279 aa12.63□□□□□ -0.39
SCARNA16.1-201ENST00000516133 SQORQ9Y6N5 450 aa12.63□□□□□ -0.39
SCARNA16.1-201ENST00000516133 TANC1Q9C0D5 1861 aa12.63□□□□□ -0.39
SCARNA16.1-201ENST00000516133 SLC37A4O43826 429 aa12.62□□□□□ -0.39
SCARNA16.1-201ENST00000516133 PPP2R5CQ13362 524 aa12.62□□□□□ -0.39
SCARNA16.1-201ENST00000516133 EARS2Q5JPH6 523 aaKnown RBP12.62□□□□□ -0.39
SCARNA16.1-201ENST00000516133 ZNF710Q8N1W2 664 aa12.62□□□□□ -0.39
SCARNA16.1-201ENST00000516133 FBXO18Q8NFZ0 1043 aa12.62□□□□□ -0.39
SCARNA16.1-201ENST00000516133 GJA10Q969M2 543 aa12.62□□□□□ -0.39
SCARNA16.1-201ENST00000516133 ZBED2Q9BTP6 218 aa12.62□□□□□ -0.39
SCARNA16.1-201ENST00000516133 IFIH1Q9BYX4 1025 aaKnown RBP12.62□□□□□ -0.39
SCARNA16.1-201ENST00000516133 KIF3AQ9Y496 699 aa12.62□□□□□ -0.39
SCARNA16.1-201ENST00000516133 CDY2AQ9Y6F7 541 aa12.62□□□□□ -0.39
SCARNA16.1-201ENST00000516133 COL6A3P12111 3177 aa12.62□□□□□ -0.39
SCARNA16.1-201ENST00000516133 IGSF9BQ9UPX0 1349 aa12.62□□□□□ -0.39
SCARNA16.1-201ENST00000516133 MYH9P35579 1960 aaKnown RBP12.61□□□□□ -0.39
SCARNA16.1-201ENST00000516133 ZBTB42B2RXF5 422 aa12.61□□□□□ -0.39
SCARNA16.1-201ENST00000516133 TLL1O43897 1013 aa12.61□□□□□ -0.39
SCARNA16.1-201ENST00000516133 ZNF862O60290 1169 aa12.61□□□□□ -0.39
SCARNA16.1-201ENST00000516133 DKC1O60832 514 aaKnown RBP eCLIP12.61□□□□□ -0.39
SCARNA16.1-201ENST00000516133 AMHP03971 560 aa12.61□□□□□ -0.39
SCARNA16.1-201ENST00000516133 OATP04181 439 aa12.61□□□□□ -0.39
SCARNA16.1-201ENST00000516133 TMOD1P28289 359 aa12.61□□□□□ -0.39
SCARNA16.1-201ENST00000516133 MGAT3Q09327 533 aa12.61□□□□□ -0.39
SCARNA16.1-201ENST00000516133 GRIN2CQ14957 1233 aa12.61□□□□□ -0.39
SCARNA16.1-201ENST00000516133 FBXO47Q5MNV8 452 aa12.61□□□□□ -0.39
SCARNA16.1-201ENST00000516133 TRMT1LQ7Z2T5 733 aaKnown RBP12.61□□□□□ -0.39
SCARNA16.1-201ENST00000516133 KIAA0319LQ8IZA0 1049 aa12.61□□□□□ -0.39
SCARNA16.1-201ENST00000516133 HAS1Q92839 578 aa12.61□□□□□ -0.39
SCARNA16.1-201ENST00000516133 ZBTB10Q96DT7 871 aa12.61□□□□□ -0.39
SCARNA16.1-201ENST00000516133 RAD9AQ99638 391 aa12.61□□□□□ -0.39
SCARNA16.1-201ENST00000516133 CELF4Q9BZC1 486 aaKnown RBP12.61□□□□□ -0.39
SCARNA16.1-201ENST00000516133 NKX2-4Q9H2Z4 354 aa12.61□□□□□ -0.39
SCARNA16.1-201ENST00000516133 FOXP1Q9H334 677 aaPredicted RBP12.61□□□□□ -0.39
SCARNA16.1-201ENST00000516133 YBX2Q9Y2T7 364 aaKnown RBP12.61□□□□□ -0.39
SCARNA16.1-201ENST00000516133 KDM3AQ9Y4C1 1321 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms