RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 MKRN3Q13064 507 aaKnown RBP22.28■■□□□ 1.16
TRIO-223ENST00000515710 ANKEF1Q9NU02 776 aa22.28■■□□□ 1.16
TRIO-223ENST00000515710 LOXHD1Q8IVV2 1947 aa22.28■■□□□ 1.16
TRIO-223ENST00000515710 TEX33O43247 280 aa22.27■■□□□ 1.16
TRIO-223ENST00000515710 YWHABP31946 246 aaKnown RBP22.27■■□□□ 1.16
TRIO-223ENST00000515710 CREBRFQ8IUR6 639 aa22.27■■□□□ 1.16
TRIO-223ENST00000515710 SCFD1Q8WVM8 642 aa22.27■■□□□ 1.16
TRIO-223ENST00000515710 VPS16Q9H269 839 aa22.27■■□□□ 1.16
TRIO-223ENST00000515710 PARVGQ9HBI0 331 aa22.27■■□□□ 1.16
TRIO-223ENST00000515710 RSPH10B2B2RC85 870 aa22.27■■□□□ 1.16
TRIO-223ENST00000515710 TPM2P07951 284 aa22.27■■□□□ 1.16
TRIO-223ENST00000515710 RSPH10BP0C881 870 aa22.27■■□□□ 1.16
TRIO-223ENST00000515710 PBX1P40424 430 aa22.27■■□□□ 1.16
TRIO-223ENST00000515710 RARRES1P49788 294 aa22.27■■□□□ 1.16
TRIO-223ENST00000515710 ZNF131P52739 623 aa22.27■■□□□ 1.16
TRIO-223ENST00000515710 FSTL1Q12841 308 aa22.27■■□□□ 1.16
TRIO-223ENST00000515710 TBX2Q13207 712 aaPredicted RBP22.27■■□□□ 1.16
TRIO-223ENST00000515710 PADI6Q6TGC4 694 aa22.27■■□□□ 1.16
TRIO-223ENST00000515710 EPM2AIP1Q7L775 607 aaPredicted RBP22.27■■□□□ 1.16
TRIO-223ENST00000515710 TIPINQ9BVW5 301 aa22.27■■□□□ 1.16
TRIO-223ENST00000515710 R3HDMLQ9H3Y0 253 aa22.27■■□□□ 1.16
TRIO-223ENST00000515710 TAB2Q9NYJ8 693 aa22.27■■□□□ 1.16
TRIO-223ENST00000515710 MORF4L1Q9UBU8 362 aa22.27■■□□□ 1.16
TRIO-223ENST00000515710 SOCS7O14512 581 aa22.26■■□□□ 1.15
TRIO-223ENST00000515710 TGFB3P10600 412 aa22.26■■□□□ 1.15
TRIO-223ENST00000515710 LRMPQ12912 555 aa22.26■■□□□ 1.15
TRIO-223ENST00000515710 ZCWPW2Q504Y3 356 aa22.26■■□□□ 1.15
TRIO-223ENST00000515710 MIS18BP1Q6P0N0 1132 aa22.26■■□□□ 1.15
TRIO-223ENST00000515710 PPP4R3CPQ6ZMV5 832 aa22.26■■□□□ 1.15
TRIO-223ENST00000515710 SEPT14Q6ZU15 432 aa22.26■■□□□ 1.15
TRIO-223ENST00000515710 ATP6V0A1Q93050 837 aa22.26■■□□□ 1.15
TRIO-223ENST00000515710 FGFBP2Q9BYJ0 223 aa22.26■■□□□ 1.15
TRIO-223ENST00000515710 SFPQP23246 707 aaKnown RBP eCLIP22.25■■□□□ 1.152e-6■□□□□ 9
TRIO-223ENST00000515710 FKBP3Q00688 224 aaKnown RBP22.25■■□□□ 1.15
TRIO-223ENST00000515710 ARID5BQ14865 1188 aa22.25■■□□□ 1.15
TRIO-223ENST00000515710 UGCGQ16739 394 aa22.25■■□□□ 1.15
TRIO-223ENST00000515710 BMT2Q1RMZ1 405 aa22.25■■□□□ 1.15
TRIO-223ENST00000515710 WDR78Q5VTH9 848 aa22.25■■□□□ 1.15
TRIO-223ENST00000515710 ABHD15Q6UXT9 468 aa22.25■■□□□ 1.15
TRIO-223ENST00000515710 MYCT1Q8N699 235 aa22.25■■□□□ 1.15
TRIO-223ENST00000515710 ZNF507Q8TCN5 953 aa22.25■■□□□ 1.15
TRIO-223ENST00000515710 ZNF526Q8TF50 670 aaPredicted RBP22.25■■□□□ 1.15
TRIO-223ENST00000515710 CNOT6LQ96LI5 555 aaKnown RBP22.25■■□□□ 1.15
TRIO-223ENST00000515710 KCTD10Q9H3F6 313 aa22.25■■□□□ 1.15
TRIO-223ENST00000515710 MRPL44Q9H9J2 332 aaKnown RBP22.25■■□□□ 1.15
TRIO-223ENST00000515710 ITIH6Q6UXX5 1313 aa22.25■■□□□ 1.15
TRIO-223ENST00000515710 HUNKP57058 714 aa22.25■■□□□ 1.15
TRIO-223ENST00000515710 ACTR2P61160 394 aa22.25■■□□□ 1.15
TRIO-223ENST00000515710 ARMCX5Q6P1M9 558 aa22.25■■□□□ 1.15
TRIO-223ENST00000515710 KCNV1Q6PIU1 500 aa22.25■■□□□ 1.15
TRIO-223ENST00000515710 OTUD6AQ7L8S5 288 aa22.25■■□□□ 1.15
TRIO-223ENST00000515710 KIAA1524Q8TCG1 905 aa22.25■■□□□ 1.15
TRIO-223ENST00000515710 CCDC43Q96MW1 224 aaKnown RBP22.25■■□□□ 1.15
TRIO-223ENST00000515710 GABBR1Q9UBS5 961 aa22.25■■□□□ 1.15
TRIO-223ENST00000515710 SRCAPQ6ZRS2 3230 aa22.24■■□□□ 1.15
TRIO-223ENST00000515710 EIF3DO15371 548 aaKnown RBP eCLIP22.24■■□□□ 1.15
TRIO-223ENST00000515710 NRDCO43847 1150 aa22.24■■□□□ 1.15
TRIO-223ENST00000515710 PGK2P07205 417 aa22.24■■□□□ 1.15
TRIO-223ENST00000515710 SP2Q02086 613 aa22.24■■□□□ 1.15
TRIO-223ENST00000515710 NEDD9Q14511 834 aa22.24■■□□□ 1.15
TRIO-223ENST00000515710 KNOP1Q1ED39 458 aaKnown RBP22.24■■□□□ 1.15
TRIO-223ENST00000515710 NELFCDQ8IXH7 590 aa22.24■■□□□ 1.15
TRIO-223ENST00000515710 FGD4Q96M96 766 aa22.24■■□□□ 1.15
TRIO-223ENST00000515710 CEP63Q96MT8 703 aa22.24■■□□□ 1.15
TRIO-223ENST00000515710 PARK7Q99497 189 aaKnown RBP22.24■■□□□ 1.15
TRIO-223ENST00000515710 TUBGCP2Q9BSJ2 902 aa22.24■■□□□ 1.15
TRIO-223ENST00000515710 PORCNQ9H237 461 aa22.24■■□□□ 1.15
TRIO-223ENST00000515710 EFCC1Q9HA90 598 aa22.24■■□□□ 1.15
TRIO-223ENST00000515710 PYCARDQ9ULZ3 195 aa22.24■■□□□ 1.15
TRIO-223ENST00000515710 ATG7O95352 703 aa22.23■■□□□ 1.15
TRIO-223ENST00000515710 MTIF2P46199 727 aaKnown RBP22.23■■□□□ 1.15
TRIO-223ENST00000515710 EDRF1Q3B7T1 1238 aa22.23■■□□□ 1.15
TRIO-223ENST00000515710 STXBP4Q6ZWJ1 553 aa22.23■■□□□ 1.15
TRIO-223ENST00000515710 ANKRD13CQ8N6S4 541 aa22.23■■□□□ 1.15
TRIO-223ENST00000515710 MORC4Q8TE76 937 aa22.23■■□□□ 1.15
TRIO-223ENST00000515710 BCAS3Q9H6U6 928 aa22.23■■□□□ 1.15
TRIO-223ENST00000515710 KIAA1217Q5T5P2 1943 aa22.23■■□□□ 1.15
TRIO-223ENST00000515710 SFI1A8K8P3 1242 aa22.23■■□□□ 1.15
TRIO-223ENST00000515710 LGALS16A8MUM7 142 aa22.23■■□□□ 1.15
TRIO-223ENST00000515710 HIP1RO75146 1068 aa22.23■■□□□ 1.15
TRIO-223ENST00000515710 SUPT20HL2P0C7V6 817 aa22.23■■□□□ 1.15
TRIO-223ENST00000515710 CASP5P51878 434 aa22.23■■□□□ 1.15
TRIO-223ENST00000515710 SWSAP1Q6NVH7 229 aa22.23■■□□□ 1.15
TRIO-223ENST00000515710 CYFIP1Q7L576 1253 aa22.23■■□□□ 1.15
TRIO-223ENST00000515710 TRAF3IP3Q9Y228 551 aa22.23■■□□□ 1.15
TRIO-223ENST00000515710 ASB14A6NK59 587 aa22.22■■□□□ 1.15
TRIO-223ENST00000515710 PDXKO00764 312 aa22.22■■□□□ 1.15
TRIO-223ENST00000515710 STRNO43815 780 aa22.22■■□□□ 1.15
TRIO-223ENST00000515710 GCNT3O95395 438 aa22.22■■□□□ 1.15
TRIO-223ENST00000515710 GNA14O95837 355 aa22.22■■□□□ 1.15
TRIO-223ENST00000515710 MYBP10242 640 aa22.22■■□□□ 1.15
TRIO-223ENST00000515710 MAPTP10636 758 aaKnown RBP22.22■■□□□ 1.15
TRIO-223ENST00000515710 DNM2P50570 870 aa22.22■■□□□ 1.15
TRIO-223ENST00000515710 CCZ1BP86790 482 aa22.22■■□□□ 1.15
TRIO-223ENST00000515710 CCZ1P86791 482 aaPredicted RBP22.22■■□□□ 1.15
TRIO-223ENST00000515710 LRRC55Q6ZSA7 311 aa22.22■■□□□ 1.15
TRIO-223ENST00000515710 ZC3H3Q8IXZ2 948 aaKnown RBP22.22■■□□□ 1.15
TRIO-223ENST00000515710 ABRAQ8N0Z2 381 aa22.22■■□□□ 1.15
TRIO-223ENST00000515710 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.22■■□□□ 1.15
TRIO-223ENST00000515710 UBE4BO95155 1302 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms