RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 XKR3Q5GH77 459 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 ZNF484Q5JVG2 852 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 C4orf19Q8IY42 314 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 CCDC155Q8N6L0 562 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 BANK1Q8NDB2 785 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 LMBR1Q8WVP7 490 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 USP28Q96RU2 1077 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 HSD17B14Q9BPX1 270 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 TUFT1Q9NNX1 390 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 PDLIM7Q9NR12 457 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 TMEM39AQ9NV64 488 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 SETD4Q9NVD3 440 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 LRWD1Q9UFC0 647 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 CFAP45Q9UL16 551 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 TBX21Q9UL17 535 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 CLIC4Q9Y696 253 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 DNAH12Q6ZR08 3092 aa13.34□□□□□ -0.27
SNF8-215ENST00000515572 TANC1Q9C0D5 1861 aa13.34□□□□□ -0.27
SNF8-215ENST00000515572 MBLAC1A4D2B0 266 aaPredicted RBP13.34□□□□□ -0.27
SNF8-215ENST00000515572 LYPLA2O95372 231 aa13.34□□□□□ -0.27
SNF8-215ENST00000515572 RPLP2P05387 115 aaKnown RBP13.34□□□□□ -0.27
SNF8-215ENST00000515572 RPA1P27694 616 aa13.34□□□□□ -0.27
SNF8-215ENST00000515572 CYP4A11Q02928 519 aa13.34□□□□□ -0.27
SNF8-215ENST00000515572 SLC39A14Q15043 492 aa13.34□□□□□ -0.27
SNF8-215ENST00000515572 PTPAQ15257 358 aa13.34□□□□□ -0.27
SNF8-215ENST00000515572 IL17AQ16552 155 aa13.34□□□□□ -0.27
SNF8-215ENST00000515572 SERINC5Q86VE9 423 aa13.34□□□□□ -0.27
SNF8-215ENST00000515572 PPP1R13LQ8WUF5 828 aa13.34□□□□□ -0.27
SNF8-215ENST00000515572 DYDC2Q96IM9 177 aa13.34□□□□□ -0.27
SNF8-215ENST00000515572 AK8Q96MA6 479 aa13.34□□□□□ -0.27
SNF8-215ENST00000515572 LXNQ9BS40 222 aa13.34□□□□□ -0.27
SNF8-215ENST00000515572 POLR3CQ9BUI4 534 aaPredicted RBP13.34□□□□□ -0.27
SNF8-215ENST00000515572 NIFKQ9BYG3 293 aaKnown RBP13.34□□□□□ -0.27
SNF8-215ENST00000515572 PRDM5Q9NQX1 630 aaPredicted RBP13.34□□□□□ -0.27
SNF8-215ENST00000515572 RGL1Q9NZL6 768 aa13.34□□□□□ -0.27
SNF8-215ENST00000515572 TUBE1Q9UJT0 475 aa13.34□□□□□ -0.27
SNF8-215ENST00000515572 CIZ1Q9ULV3 898 aaPredicted RBP13.34□□□□□ -0.27
SNF8-215ENST00000515572 ZDHHC9Q9Y397 364 aa13.34□□□□□ -0.27
SNF8-215ENST00000515572 PPME1Q9Y570 386 aa13.34□□□□□ -0.27
SNF8-215ENST00000515572 VWA3AA6NCI4 1184 aa13.33□□□□□ -0.28
SNF8-215ENST00000515572 PITPNM1O00562 1244 aa13.33□□□□□ -0.28
SNF8-215ENST00000515572 TREHO43280 583 aa13.33□□□□□ -0.28
SNF8-215ENST00000515572 CAND2O75155 1236 aa13.33□□□□□ -0.28
SNF8-215ENST00000515572 SLITRK3O94933 977 aa13.33□□□□□ -0.28
SNF8-215ENST00000515572 YEATS4O95619 227 aa13.33□□□□□ -0.28
SNF8-215ENST00000515572 CEBPZQ03701 1054 aaKnown RBP13.33□□□□□ -0.28
SNF8-215ENST00000515572 RBL2Q08999 1139 aa13.33□□□□□ -0.28
SNF8-215ENST00000515572 BFSP2Q13515 415 aa13.33□□□□□ -0.28
SNF8-215ENST00000515572 CTTNQ14247 550 aaKnown RBP13.33□□□□□ -0.28
SNF8-215ENST00000515572 HIC1Q14526 733 aa13.33□□□□□ -0.28
SNF8-215ENST00000515572 KRT79Q5XKE5 535 aa13.33□□□□□ -0.28
SNF8-215ENST00000515572 TAF2Q6P1X5 1199 aa13.33□□□□□ -0.28
SNF8-215ENST00000515572 OTUD6AQ7L8S5 288 aa13.33□□□□□ -0.28
SNF8-215ENST00000515572 TPH2Q8IWU9 490 aa13.33□□□□□ -0.28
SNF8-215ENST00000515572 CAGE1Q8TC20 777 aa13.33□□□□□ -0.28
SNF8-215ENST00000515572 CTAGE1Q96RT6 745 aa13.33□□□□□ -0.28
SNF8-215ENST00000515572 FTOQ9C0B1 505 aaKnown RBP eCLIP13.33□□□□□ -0.28
SNF8-215ENST00000515572 HIPK3Q9H422 1215 aa13.33□□□□□ -0.28
SNF8-215ENST00000515572 TSHZ2Q9NRE2 1034 aa13.33□□□□□ -0.28
SNF8-215ENST00000515572 SEPT9Q9UHD8 586 aaPredicted RBP13.33□□□□□ -0.28
SNF8-215ENST00000515572 RBM19Q9Y4C8 960 aaKnown RBP13.33□□□□□ -0.28
SNF8-215ENST00000515572 TNRC18O15417 2968 aaPredicted RBP13.32□□□□□ -0.28
SNF8-215ENST00000515572 TRIM43BA6NCK2 446 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 DDX11L8A8MPP1 907 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 ZBTB42B2RXF5 422 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 MAGEB2O15479 319 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 SLC26A4O43511 780 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 STBD1O95210 358 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 TIMP1P01033 207 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 SPATA31C1P0DKV0 1188 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 CYP2C9P11712 490 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 XRCC6P12956 609 aaKnown RBP eCLIP13.32□□□□□ -0.281e-6■■■■■ 27.1
SNF8-215ENST00000515572 RAG1P15918 1043 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 KLRC1P26715 233 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 YWHABP31946 246 aaKnown RBP13.32□□□□□ -0.28
SNF8-215ENST00000515572 LONP1P36776 959 aaKnown RBP13.32□□□□□ -0.28
SNF8-215ENST00000515572 IGBP1P78318 339 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 ZNF200P98182 395 aaPredicted RBP13.32□□□□□ -0.28
SNF8-215ENST00000515572 STK38Q15208 465 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 MARCH8Q5T0T0 291 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 ANO5Q75V66 913 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 SH3RF1Q7Z6J0 888 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 RSPH3Q86UC2 560 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 CATSPER3Q86XQ3 398 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 EXOC8Q8IYI6 725 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 KCTD17Q8N5Z5 321 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 LINC00301Q8NCQ3 95 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 SNX29Q8TEQ0 813 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 TRIM43Q96BQ3 446 aaPredicted RBP13.32□□□□□ -0.28
SNF8-215ENST00000515572 NOC4LQ9BVI4 516 aaKnown RBP13.32□□□□□ -0.28
SNF8-215ENST00000515572 ANKEF1Q9NU02 776 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 WRAP73Q9P2S5 460 aaPredicted RBP13.32□□□□□ -0.28
SNF8-215ENST00000515572 TFIP11Q9UBB9 837 aaKnown RBP13.32□□□□□ -0.28
SNF8-215ENST00000515572 PCDHA2Q9Y5H9 948 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 SRPRBQ9Y5M8 271 aaKnown RBP13.32□□□□□ -0.28
SNF8-215ENST00000515572 TCHHQ07283 1943 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 KDM3AQ9Y4C1 1321 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 EVPLQ92817 2033 aa13.32□□□□□ -0.28
SNF8-215ENST00000515572 PDE4DIPQ5VU43 2346 aa13.31□□□□□ -0.28
SNF8-215ENST00000515572 PPP6R2O75170 966 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms