RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 DHX15O43143 795 aaKnown RBP15.49■□□□□ 0.07
TCOF1-215ENST00000515516 CDKL5O76039 1030 aa15.49■□□□□ 0.07
TCOF1-215ENST00000515516 CIITAP33076 1130 aa15.49■□□□□ 0.07
TCOF1-215ENST00000515516 USP11P51784 963 aa15.49■□□□□ 0.07
TCOF1-215ENST00000515516 HTRA4P83105 476 aaPredicted RBP15.49■□□□□ 0.07
TCOF1-215ENST00000515516 MKRN4PQ13434 485 aaPredicted RBP15.49■□□□□ 0.07
TCOF1-215ENST00000515516 ZNF484Q5JVG2 852 aa15.49■□□□□ 0.07
TCOF1-215ENST00000515516 FBXO47Q5MNV8 452 aa15.49■□□□□ 0.07
TCOF1-215ENST00000515516 MTHFD1LQ6UB35 978 aa15.49■□□□□ 0.07
TCOF1-215ENST00000515516 SMAP1Q8IYB5 467 aaPredicted RBP15.49■□□□□ 0.07
TCOF1-215ENST00000515516 FBXO22Q8NEZ5 403 aa15.49■□□□□ 0.07
TCOF1-215ENST00000515516 GDPD5Q8WTR4 605 aa15.49■□□□□ 0.07
TCOF1-215ENST00000515516 TRAPPC12Q8WVT3 735 aa15.49■□□□□ 0.07
TCOF1-215ENST00000515516 ZBTB10Q96DT7 871 aa15.49■□□□□ 0.07
TCOF1-215ENST00000515516 OSBPL7Q9BZF2 842 aa15.49■□□□□ 0.07
TCOF1-215ENST00000515516 SUGCTQ9HAC7 445 aa15.49■□□□□ 0.07
TCOF1-215ENST00000515516 PCDHA4Q9UN74 947 aa15.49■□□□□ 0.07
TCOF1-215ENST00000515516 TRPV2Q9Y5S1 764 aa15.49■□□□□ 0.07
TCOF1-215ENST00000515516 SQORQ9Y6N5 450 aa15.49■□□□□ 0.07
TCOF1-215ENST00000515516 CDH23Q9H251 3354 aa15.49■□□□□ 0.07
TCOF1-215ENST00000515516 TRIP12Q14669 1992 aaPredicted RBP15.48■□□□□ 0.07
TCOF1-215ENST00000515516 SMIM35A0A1B0GVV1 85 aa15.48■□□□□ 0.07
TCOF1-215ENST00000515516 ADAMTS3O15072 1205 aa15.48■□□□□ 0.07
TCOF1-215ENST00000515516 KLRC1P26715 233 aa15.48■□□□□ 0.07
TCOF1-215ENST00000515516 TMEM62Q0P6H9 643 aa15.48■□□□□ 0.07
TCOF1-215ENST00000515516 KRT40Q6A162 431 aa15.48■□□□□ 0.07
TCOF1-215ENST00000515516 SPRED2Q7Z698 418 aa15.48■□□□□ 0.07
TCOF1-215ENST00000515516 CCDC60Q8IWA6 550 aaPredicted RBP15.48■□□□□ 0.07
TCOF1-215ENST00000515516 IL17RAQ96F46 866 aa15.48■□□□□ 0.07
TCOF1-215ENST00000515516 FTHL17Q9BXU8 183 aa15.48■□□□□ 0.07
TCOF1-215ENST00000515516 COG5Q9UP83 839 aa15.48■□□□□ 0.07
TCOF1-215ENST00000515516 PCDHA10Q9Y5I2 948 aa15.48■□□□□ 0.07
TCOF1-215ENST00000515516 COL1A2P08123 1366 aa15.48■□□□□ 0.07
TCOF1-215ENST00000515516 WDR64B1ANS9 1081 aa15.47■□□□□ 0.07
TCOF1-215ENST00000515516 ENPP3O14638 875 aa15.47■□□□□ 0.07
TCOF1-215ENST00000515516 XBP1P17861 261 aa15.47■□□□□ 0.07
TCOF1-215ENST00000515516 CD52P31358 61 aa15.47■□□□□ 0.07
TCOF1-215ENST00000515516 PAK2Q13177 524 aa15.47■□□□□ 0.07
TCOF1-215ENST00000515516 ANKRD1Q15327 319 aa15.47■□□□□ 0.07
TCOF1-215ENST00000515516 PTPROQ16827 1216 aa15.47■□□□□ 0.07
TCOF1-215ENST00000515516 GALNT17Q6IS24 598 aa15.47■□□□□ 0.07
TCOF1-215ENST00000515516 BLIDQ8IZY5 108 aa15.47■□□□□ 0.07
TCOF1-215ENST00000515516 FAM177A1Q8N128 213 aaPredicted RBP15.47■□□□□ 0.07
TCOF1-215ENST00000515516 FIBCD1Q8N539 461 aa15.47■□□□□ 0.07
TCOF1-215ENST00000515516 SP7Q8TDD2 431 aaPredicted RBP15.47■□□□□ 0.07
TCOF1-215ENST00000515516 BBXQ8WY36 941 aaPredicted RBP15.47■□□□□ 0.07
TCOF1-215ENST00000515516 C17orf80Q9BSJ5 609 aa15.47■□□□□ 0.07
TCOF1-215ENST00000515516 CELF4Q9BZC1 486 aaKnown RBP15.47■□□□□ 0.07
TCOF1-215ENST00000515516 SLKQ9H2G2 1235 aaPredicted RBP15.47■□□□□ 0.07
TCOF1-215ENST00000515516 CEP131Q9UPN4 1083 aa15.47■□□□□ 0.07
TCOF1-215ENST00000515516 TET1Q8NFU7 2136 aa15.46■□□□□ 0.07
TCOF1-215ENST00000515516 RBAK-RBAKDNI3L0D1 243 aa15.46■□□□□ 0.07
TCOF1-215ENST00000515516 LPXNO60711 386 aa15.46■□□□□ 0.07
TCOF1-215ENST00000515516 GAS7O60861 476 aa15.46■□□□□ 0.07
TCOF1-215ENST00000515516 CENPBP07199 599 aaPredicted RBP15.46■□□□□ 0.07
TCOF1-215ENST00000515516 ANAPC15P60006 121 aa15.46■□□□□ 0.07
TCOF1-215ENST00000515516 EPC2Q52LR7 807 aa15.46■□□□□ 0.07
TCOF1-215ENST00000515516 ODR4Q5SWX8 454 aa15.46■□□□□ 0.07
TCOF1-215ENST00000515516 TRMT1LQ7Z2T5 733 aaKnown RBP15.46■□□□□ 0.07
TCOF1-215ENST00000515516 TBCKQ8TEA7 893 aa15.46■□□□□ 0.07
TCOF1-215ENST00000515516 HLA-CQ95604 372 aa15.46■□□□□ 0.07
TCOF1-215ENST00000515516 FAM167AQ96KS9 214 aa15.46■□□□□ 0.07
TCOF1-215ENST00000515516 NRBP2Q9NSY0 501 aa15.46■□□□□ 0.07
TCOF1-215ENST00000515516 GABBR1Q9UBS5 961 aa15.46■□□□□ 0.07
TCOF1-215ENST00000515516 GINS2Q9Y248 185 aa15.46■□□□□ 0.07
TCOF1-215ENST00000515516 MAFBQ9Y5Q3 323 aaPredicted RBP15.46■□□□□ 0.07
TCOF1-215ENST00000515516 LRCH2Q5VUJ6 765 aa15.45■□□□□ 0.06
TCOF1-215ENST00000515516 FAM43BQ6ZT52 329 aaPredicted RBP15.45■□□□□ 0.06
TCOF1-215ENST00000515516 TMEM192Q8IY95 271 aa15.45■□□□□ 0.06
TCOF1-215ENST00000515516 METTL13Q8N6R0 699 aa15.45■□□□□ 0.06
TCOF1-215ENST00000515516 RIT2Q99578 217 aa15.45■□□□□ 0.06
TCOF1-215ENST00000515516 TEKT3Q9BXF9 490 aa15.45■□□□□ 0.06
TCOF1-215ENST00000515516 AGO3Q9H9G7 860 aaKnown RBP15.45■□□□□ 0.06
TCOF1-215ENST00000515516 DISC1Q9NRI5 854 aa15.45■□□□□ 0.06
TCOF1-215ENST00000515516 PADI3Q9ULW8 664 aa15.45■□□□□ 0.06
TCOF1-215ENST00000515516 RWDD3Q9Y3V2 267 aa15.45■□□□□ 0.06
TCOF1-215ENST00000515516 A0A0C4DFX4 3053 aa15.44■□□□□ 0.06
TCOF1-215ENST00000515516 MSH4O15457 936 aa15.44■□□□□ 0.06
TCOF1-215ENST00000515516 MAGEB2O15479 319 aa15.44■□□□□ 0.06
TCOF1-215ENST00000515516 CHMP2AO43633 222 aa15.44■□□□□ 0.06
TCOF1-215ENST00000515516 STAG3L1P0CL83 205 aa15.44■□□□□ 0.06
TCOF1-215ENST00000515516 TMOD1P28289 359 aa15.44■□□□□ 0.06
TCOF1-215ENST00000515516 SFNP31947 248 aa15.44■□□□□ 0.06
TCOF1-215ENST00000515516 JAK3P52333 1124 aa15.44■□□□□ 0.06
TCOF1-215ENST00000515516 NFX1Q12986 1120 aaKnown RBP15.44■□□□□ 0.06
TCOF1-215ENST00000515516 GPM6BQ13491 265 aa15.44■□□□□ 0.06
TCOF1-215ENST00000515516 NONOQ15233 471 aaKnown RBP eCLIP15.44■□□□□ 0.06
TCOF1-215ENST00000515516 DAGLBQ8NCG7 672 aa15.44■□□□□ 0.06
TCOF1-215ENST00000515516 ADAMTS19Q8TE59 1207 aa15.44■□□□□ 0.06
TCOF1-215ENST00000515516 LENG9Q96B70 501 aa15.44■□□□□ 0.06
TCOF1-215ENST00000515516 UHRF1Q96T88 793 aaPredicted RBP15.44■□□□□ 0.06
TCOF1-215ENST00000515516 RNF216Q9NWF9 866 aaPredicted RBP15.44■□□□□ 0.06
TCOF1-215ENST00000515516 CHD9Q3L8U1 2897 aa15.44■□□□□ 0.06
TCOF1-215ENST00000515516 GBF1Q92538 1859 aa15.44■□□□□ 0.06
TCOF1-215ENST00000515516 IGSF9BQ9UPX0 1349 aa15.43■□□□□ 0.06
TCOF1-215ENST00000515516 KDM3AQ9Y4C1 1321 aa15.43■□□□□ 0.06
TCOF1-215ENST00000515516 TNFRSF10AO00220 468 aa15.43■□□□□ 0.06
TCOF1-215ENST00000515516 GPR182O15218 404 aa15.43■□□□□ 0.06
TCOF1-215ENST00000515516 RPS6KA5O75582 802 aa15.43■□□□□ 0.06
TCOF1-215ENST00000515516 ATP4AP20648 1035 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms