RNA–Protein interactions for RNA: ENST00000515514.1

CDK18-223, Transcript of cyclin dependent kinase 18, human

TSL 4

Gene CDK18, Length 541 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-223	ENST00000515514	COL1A2	P08123	1366 aa		14.03	□□□□□ -0.16
CDK18-223	ENST00000515514	NLRC5	Q86WI3	1866 aa		14.03	□□□□□ -0.16
CDK18-223	ENST00000515514	IGSF9B	Q9UPX0	1349 aa		14.02	□□□□□ -0.17
CDK18-223	ENST00000515514	KDM3A	Q9Y4C1	1321 aa		14.02	□□□□□ -0.17
CDK18-223	ENST00000515514	SMIM35	A0A1B0GVV1	85 aa		14.02	□□□□□ -0.17
CDK18-223	ENST00000515514		H3BNC9	293 aa		14.02	□□□□□ -0.17
CDK18-223	ENST00000515514	IPO5	O00410	1097 aa	Known RBP	14.02	□□□□□ -0.17
CDK18-223	ENST00000515514	PRPF3	O43395	683 aa	Known RBP	14.02	□□□□□ -0.17
CDK18-223	ENST00000515514	AKAP17A	Q02040	695 aa	Known RBP	14.02	□□□□□ -0.17
CDK18-223	ENST00000515514	PKN1	Q16512	942 aa		14.02	□□□□□ -0.17
CDK18-223	ENST00000515514	ABHD15	Q6UXT9	468 aa		14.02	□□□□□ -0.17
CDK18-223	ENST00000515514	CCDC60	Q8IWA6	550 aa	Predicted RBP	14.02	□□□□□ -0.17
CDK18-223	ENST00000515514	TMEM192	Q8IY95	271 aa		14.02	□□□□□ -0.17
CDK18-223	ENST00000515514	BICD2	Q8TD16	824 aa		14.02	□□□□□ -0.17
CDK18-223	ENST00000515514	ATP8B4	Q8TF62	1192 aa		14.02	□□□□□ -0.17
CDK18-223	ENST00000515514	IL17RA	Q96F46	866 aa		14.02	□□□□□ -0.17
CDK18-223	ENST00000515514	FTHL17	Q9BXU8	183 aa		14.02	□□□□□ -0.17
CDK18-223	ENST00000515514	UBE2Z	Q9H832	354 aa	Predicted RBP	14.02	□□□□□ -0.17
CDK18-223	ENST00000515514	BDP1	A6H8Y1	2624 aa		14.02	□□□□□ -0.17
CDK18-223	ENST00000515514	NCOR1	O75376	2440 aa		14.02	□□□□□ -0.17
CDK18-223	ENST00000515514	C5orf67	F2Z3F1	127 aa		14.01	□□□□□ -0.17
CDK18-223	ENST00000515514	DDX39A	O00148	427 aa	Known RBP	14.01	□□□□□ -0.17
CDK18-223	ENST00000515514	BACH1	O14867	736 aa		14.01	□□□□□ -0.17
CDK18-223	ENST00000515514	DHX15	O43143	795 aa	Known RBP	14.01	□□□□□ -0.17
CDK18-223	ENST00000515514	HBP1	O60381	514 aa		14.01	□□□□□ -0.17
CDK18-223	ENST00000515514	IFNAR1	P17181	557 aa		14.01	□□□□□ -0.17
CDK18-223	ENST00000515514	EVC	P57679	992 aa		14.01	□□□□□ -0.17
CDK18-223	ENST00000515514	NTRK3	Q16288	839 aa		14.01	□□□□□ -0.17
CDK18-223	ENST00000515514	MIS18BP1	Q6P0N0	1132 aa		14.01	□□□□□ -0.17
CDK18-223	ENST00000515514	FAM43B	Q6ZT52	329 aa	Predicted RBP	14.01	□□□□□ -0.17
CDK18-223	ENST00000515514	SMAP1	Q8IYB5	467 aa	Predicted RBP	14.01	□□□□□ -0.17
CDK18-223	ENST00000515514	NME8	Q8N427	588 aa		14.01	□□□□□ -0.17
CDK18-223	ENST00000515514	FIBCD1	Q8N539	461 aa		14.01	□□□□□ -0.17
CDK18-223	ENST00000515514	TRAPPC12	Q8WVT3	735 aa		14.01	□□□□□ -0.17
CDK18-223	ENST00000515514	LINC01599	Q8WXQ3	324 aa		14.01	□□□□□ -0.17
CDK18-223	ENST00000515514	PHKB	Q93100	1093 aa		14.01	□□□□□ -0.17
CDK18-223	ENST00000515514	ZBTB10	Q96DT7	871 aa		14.01	□□□□□ -0.17
CDK18-223	ENST00000515514	NECAB3	Q96P71	396 aa	Predicted RBP	14.01	□□□□□ -0.17
CDK18-223	ENST00000515514	AGO3	Q9H9G7	860 aa	Known RBP	14.01	□□□□□ -0.17
CDK18-223	ENST00000515514	TBC1D22B	Q9NU19	505 aa		14.01	□□□□□ -0.17
CDK18-223	ENST00000515514	TCEAL9	Q9UHQ7	104 aa		14.01	□□□□□ -0.17
CDK18-223	ENST00000515514	RB1	P06400	928 aa		14	□□□□□ -0.17
CDK18-223	ENST00000515514	LINC00271	P0C7V0	271 aa		14	□□□□□ -0.17
CDK18-223	ENST00000515514	CD52	P31358	61 aa		14	□□□□□ -0.17
CDK18-223	ENST00000515514	CIITA	P33076	1130 aa		14	□□□□□ -0.17
CDK18-223	ENST00000515514	CTNNB1	P35222	781 aa		14	□□□□□ -0.17
CDK18-223	ENST00000515514	KRT76	Q01546	638 aa		14	□□□□□ -0.17
CDK18-223	ENST00000515514	PAK2	Q13177	524 aa		14	□□□□□ -0.17
CDK18-223	ENST00000515514	GPM6B	Q13491	265 aa		14	□□□□□ -0.17
CDK18-223	ENST00000515514	ZNF746	Q6NUN9	644 aa	Predicted RBP	14	□□□□□ -0.17
CDK18-223	ENST00000515514	PDXDC2P	Q6P474	469 aa		14	□□□□□ -0.17
CDK18-223	ENST00000515514	MTHFD1L	Q6UB35	978 aa		14	□□□□□ -0.17
CDK18-223	ENST00000515514	CLP1	Q92989	425 aa	Known RBP	14	□□□□□ -0.17
CDK18-223	ENST00000515514	ZNF689	Q96CS4	500 aa	Predicted RBP	14	□□□□□ -0.17
CDK18-223	ENST00000515514	ZNF577	Q9BSK1	485 aa		14	□□□□□ -0.17
CDK18-223	ENST00000515514	C11orf84	Q9BUA3	381 aa	Predicted RBP	14	□□□□□ -0.17
CDK18-223	ENST00000515514	CELF4	Q9BZC1	486 aa	Known RBP	14	□□□□□ -0.17
CDK18-223	ENST00000515514	ZNF302	Q9NR11	478 aa		14	□□□□□ -0.17
CDK18-223	ENST00000515514	TTC3	P53804	2025 aa		13.99	□□□□□ -0.17
CDK18-223	ENST00000515514	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.99	□□□□□ -0.17
CDK18-223	ENST00000515514	ENPP3	O14638	875 aa		13.99	□□□□□ -0.17
CDK18-223	ENST00000515514	DGKI	O75912	1065 aa		13.99	□□□□□ -0.17
CDK18-223	ENST00000515514	PDIA3	P30101	505 aa	Known RBP	13.99	□□□□□ -0.17
CDK18-223	ENST00000515514	LEXM	Q3ZCV2	418 aa		13.99	□□□□□ -0.17
CDK18-223	ENST00000515514	ZNF484	Q5JVG2	852 aa		13.99	□□□□□ -0.17
CDK18-223	ENST00000515514	NPAS4	Q8IUM7	802 aa		13.99	□□□□□ -0.17
CDK18-223	ENST00000515514	SLC26A6	Q9BXS9	759 aa		13.99	□□□□□ -0.17
CDK18-223	ENST00000515514	LMAN2L	Q9H0V9	348 aa		13.99	□□□□□ -0.17
CDK18-223	ENST00000515514	NSUN3	Q9H649	340 aa	Known RBP	13.99	□□□□□ -0.17
CDK18-223	ENST00000515514	SH3GLB2	Q9NR46	395 aa		13.99	□□□□□ -0.17
CDK18-223	ENST00000515514	BRWD1	Q9NSI6	2320 aa		13.99	□□□□□ -0.17
CDK18-223	ENST00000515514	ZBTB42	B2RXF5	422 aa		13.98	□□□□□ -0.17
CDK18-223	ENST00000515514	ADAMTS3	O15072	1205 aa		13.98	□□□□□ -0.17
CDK18-223	ENST00000515514	KLRC1	P26715	233 aa		13.98	□□□□□ -0.17
CDK18-223	ENST00000515514	TMEM62	Q0P6H9	643 aa		13.98	□□□□□ -0.17
CDK18-223	ENST00000515514	BTG3	Q14201	252 aa	Predicted RBP	13.98	□□□□□ -0.17
CDK18-223	ENST00000515514	COL19A1	Q14993	1142 aa		13.98	□□□□□ -0.17
CDK18-223	ENST00000515514	PRR16	Q569H4	304 aa		13.98	□□□□□ -0.17
CDK18-223	ENST00000515514	RUFY3	Q7L099	469 aa		13.98	□□□□□ -0.17
CDK18-223	ENST00000515514	TRIM22	Q8IYM9	498 aa		13.98	□□□□□ -0.17
CDK18-223	ENST00000515514	CMTR2	Q8IYT2	770 aa	Known RBP	13.98	□□□□□ -0.17
CDK18-223	ENST00000515514	FAM177A1	Q8N128	213 aa	Predicted RBP	13.98	□□□□□ -0.17
CDK18-223	ENST00000515514	CRIPAK	Q8N1N5	446 aa		13.98	□□□□□ -0.17
CDK18-223	ENST00000515514	BANK1	Q8NDB2	785 aa		13.98	□□□□□ -0.17
CDK18-223	ENST00000515514	RASGRP4	Q8TDF6	673 aa		13.98	□□□□□ -0.17
CDK18-223	ENST00000515514	BBX	Q8WY36	941 aa	Predicted RBP	13.98	□□□□□ -0.17
CDK18-223	ENST00000515514	LENG9	Q96B70	501 aa		13.98	□□□□□ -0.17
CDK18-223	ENST00000515514	FAM167A	Q96KS9	214 aa		13.98	□□□□□ -0.17
CDK18-223	ENST00000515514	NCOA5	Q9HCD5	579 aa	Known RBP	13.98	□□□□□ -0.17
CDK18-223	ENST00000515514	ZSWIM6	Q9HCJ5	1215 aa		13.98	□□□□□ -0.17
CDK18-223	ENST00000515514	VPS54	Q9P1Q0	977 aa		13.98	□□□□□ -0.17
CDK18-223	ENST00000515514	PADI3	Q9ULW8	664 aa		13.98	□□□□□ -0.17
CDK18-223	ENST00000515514	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.98	□□□□□ -0.17
CDK18-223	ENST00000515514	TCF20	Q9UGU0	1960 aa	Known RBP	13.97	□□□□□ -0.17
CDK18-223	ENST00000515514	WDR64	B1ANS9	1081 aa		13.97	□□□□□ -0.17
CDK18-223	ENST00000515514	C22orf31	O95567	290 aa		13.97	□□□□□ -0.17
CDK18-223	ENST00000515514	PSAP	P07602	524 aa		13.97	□□□□□ -0.17
CDK18-223	ENST00000515514	STAG3L1	P0CL83	205 aa		13.97	□□□□□ -0.17
CDK18-223	ENST00000515514	KCNA5	P22460	613 aa		13.97	□□□□□ -0.17
CDK18-223	ENST00000515514	BMPR1A	P36894	532 aa		13.97	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms