RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 XBP1P17861 261 aa13□□□□□ -0.33
VCAN-212ENST00000515397 IKBKEQ14164 716 aa13□□□□□ -0.33
VCAN-212ENST00000515397 RAB30Q15771 203 aa13□□□□□ -0.33
VCAN-212ENST00000515397 UGCGQ16739 394 aa13□□□□□ -0.33
VCAN-212ENST00000515397 Q4G0T1 1027 aa13□□□□□ -0.33
VCAN-212ENST00000515397 LRCH2Q5VUJ6 765 aa13□□□□□ -0.33
VCAN-212ENST00000515397 FAM160B1Q5W0V3 765 aa13□□□□□ -0.33
VCAN-212ENST00000515397 GALNT17Q6IS24 598 aa13□□□□□ -0.33
VCAN-212ENST00000515397 ZNF746Q6NUN9 644 aaPredicted RBP13□□□□□ -0.33
VCAN-212ENST00000515397 MTHFD1LQ6UB35 978 aa13□□□□□ -0.33
VCAN-212ENST00000515397 KRT25Q7Z3Z0 450 aa13□□□□□ -0.33
VCAN-212ENST00000515397 ATP8B4Q8TF62 1192 aa13□□□□□ -0.33
VCAN-212ENST00000515397 PPM1EQ8WY54 764 aa13□□□□□ -0.33
VCAN-212ENST00000515397 SLC5A5Q92911 643 aa13□□□□□ -0.33
VCAN-212ENST00000515397 SH2D3AQ9BRG2 576 aa13□□□□□ -0.33
VCAN-212ENST00000515397 ZBED2Q9BTP6 218 aa13□□□□□ -0.33
VCAN-212ENST00000515397 CDHR5Q9HBB8 845 aa13□□□□□ -0.33
VCAN-212ENST00000515397 DISC1Q9NRI5 854 aa13□□□□□ -0.33
VCAN-212ENST00000515397 GINS2Q9Y248 185 aa13□□□□□ -0.33
VCAN-212ENST00000515397 PCDHA10Q9Y5I2 948 aa13□□□□□ -0.33
VCAN-212ENST00000515397 CDY2AQ9Y6F7 541 aa13□□□□□ -0.33
VCAN-212ENST00000515397 CYP3A7-CYP3A51PA0A087WV96 503 aa12.99□□□□□ -0.33
VCAN-212ENST00000515397 TMEM150BA6NC51 233 aa12.99□□□□□ -0.33
VCAN-212ENST00000515397 ZBTB42B2RXF5 422 aa12.99□□□□□ -0.33
VCAN-212ENST00000515397 DLL1O00548 723 aa12.99□□□□□ -0.33
VCAN-212ENST00000515397 WNT7AO00755 349 aa12.99□□□□□ -0.33
VCAN-212ENST00000515397 TLL1O43897 1013 aa12.99□□□□□ -0.33
VCAN-212ENST00000515397 HBP1O60381 514 aa12.99□□□□□ -0.33
VCAN-212ENST00000515397 PSMD10O75832 226 aa12.99□□□□□ -0.33
VCAN-212ENST00000515397 BAIAP3O94812 1187 aa12.99□□□□□ -0.33
VCAN-212ENST00000515397 FOSL2P15408 326 aa12.99□□□□□ -0.33
VCAN-212ENST00000515397 CYP3A7P24462 503 aa12.99□□□□□ -0.33
VCAN-212ENST00000515397 KRT76Q01546 638 aa12.99□□□□□ -0.33
VCAN-212ENST00000515397 MGAT3Q09327 533 aa12.99□□□□□ -0.33
VCAN-212ENST00000515397 ADGRE1Q14246 886 aa12.99□□□□□ -0.33
VCAN-212ENST00000515397 LPIN1Q14693 890 aa12.99□□□□□ -0.33
VCAN-212ENST00000515397 PLEKHG4Q58EX7 1191 aa12.99□□□□□ -0.33
VCAN-212ENST00000515397 FAM26DQ5JW98 314 aa12.99□□□□□ -0.33
VCAN-212ENST00000515397 PPP2R2DQ66LE6 453 aa12.99□□□□□ -0.33
VCAN-212ENST00000515397 KRT40Q6A162 431 aa12.99□□□□□ -0.33
VCAN-212ENST00000515397 MYOCDQ8IZQ8 938 aa12.99□□□□□ -0.33
VCAN-212ENST00000515397 WASF1Q92558 559 aa12.99□□□□□ -0.33
VCAN-212ENST00000515397 ZNF668Q96K58 619 aaPredicted RBP12.99□□□□□ -0.33
VCAN-212ENST00000515397 SLC9A7Q96T83 725 aa12.99□□□□□ -0.33
VCAN-212ENST00000515397 TEKT3Q9BXF9 490 aa12.99□□□□□ -0.33
VCAN-212ENST00000515397 PCDHA11Q9Y5I1 949 aa12.99□□□□□ -0.33
VCAN-212ENST00000515397 MAFBQ9Y5Q3 323 aaPredicted RBP12.99□□□□□ -0.33
VCAN-212ENST00000515397 ABHD14A-ACY1A0A1B0GW23 586 aa12.98□□□□□ -0.33
VCAN-212ENST00000515397 EPOPA6NHQ4 379 aa12.98□□□□□ -0.33
VCAN-212ENST00000515397 WDR64B1ANS9 1081 aa12.98□□□□□ -0.33
VCAN-212ENST00000515397 EML1O00423 815 aa12.98□□□□□ -0.33
VCAN-212ENST00000515397 PARNO95453 639 aaKnown RBP12.98□□□□□ -0.33
VCAN-212ENST00000515397 ATP2B1P20020 1258 aa12.98□□□□□ -0.33
VCAN-212ENST00000515397 IBSPP21815 317 aaPredicted RBP12.98□□□□□ -0.33
VCAN-212ENST00000515397 IGFBP4P22692 258 aa12.98□□□□□ -0.33
VCAN-212ENST00000515397 CD52P31358 61 aa12.98□□□□□ -0.33
VCAN-212ENST00000515397 KRT2P35908 639 aa12.98□□□□□ -0.33
VCAN-212ENST00000515397 MRPS6P82932 125 aaKnown RBP12.98□□□□□ -0.33
VCAN-212ENST00000515397 TAF2Q6P1X5 1199 aa12.98□□□□□ -0.33
VCAN-212ENST00000515397 MIER3Q7Z3K6 550 aa12.98□□□□□ -0.33
VCAN-212ENST00000515397 NEK8Q86SG6 692 aa12.98□□□□□ -0.33
VCAN-212ENST00000515397 RSPH3Q86UC2 560 aa12.98□□□□□ -0.33
VCAN-212ENST00000515397 METTL13Q8N6R0 699 aa12.98□□□□□ -0.33
VCAN-212ENST00000515397 SLC17A8Q8NDX2 589 aa12.98□□□□□ -0.33
VCAN-212ENST00000515397 ETNPPLQ8TBG4 499 aa12.98□□□□□ -0.33
VCAN-212ENST00000515397 PHOSPHO2Q8TCD6 241 aa12.98□□□□□ -0.33
VCAN-212ENST00000515397 SEPT8Q92599 483 aa12.98□□□□□ -0.33
VCAN-212ENST00000515397 MBOAT7Q96N66 472 aa12.98□□□□□ -0.33
VCAN-212ENST00000515397 IFIH1Q9BYX4 1025 aaKnown RBP12.98□□□□□ -0.33
VCAN-212ENST00000515397 AGO3Q9H9G7 860 aaKnown RBP12.98□□□□□ -0.33
VCAN-212ENST00000515397 MTUS1Q9ULD2 1270 aa12.98□□□□□ -0.33
VCAN-212ENST00000515397 PCDHA2Q9Y5H9 948 aa12.98□□□□□ -0.33
VCAN-212ENST00000515397 TMEM265A0A087WTH1 108 aa12.97□□□□□ -0.33
VCAN-212ENST00000515397 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.97□□□□□ -0.33
VCAN-212ENST00000515397 KIF28PB7ZC32 967 aa12.97□□□□□ -0.33
VCAN-212ENST00000515397 CD2BP2O95400 341 aaKnown RBP12.97□□□□□ -0.33
VCAN-212ENST00000515397 MMP1P03956 469 aa12.97□□□□□ -0.33
VCAN-212ENST00000515397 RBM25P49756 843 aaKnown RBP12.97□□□□□ -0.33
VCAN-212ENST00000515397 TAP1Q03518 808 aa12.97□□□□□ -0.33
VCAN-212ENST00000515397 CCDC85BQ15834 202 aaPredicted RBP12.97□□□□□ -0.33
VCAN-212ENST00000515397 TMEM266Q2M3C6 531 aa12.97□□□□□ -0.33
VCAN-212ENST00000515397 FBXO47Q5MNV8 452 aa12.97□□□□□ -0.33
VCAN-212ENST00000515397 SMAP1Q8IYB5 467 aaPredicted RBP12.97□□□□□ -0.33
VCAN-212ENST00000515397 DIS3L2Q8IYB7 885 aaKnown RBP12.97□□□□□ -0.33
VCAN-212ENST00000515397 KIAA0319LQ8IZA0 1049 aa12.97□□□□□ -0.33
VCAN-212ENST00000515397 MAFAQ8NHW3 353 aaPredicted RBP12.97□□□□□ -0.33
VCAN-212ENST00000515397 ARNTL2Q8WYA1 636 aa12.97□□□□□ -0.33
VCAN-212ENST00000515397 HAS1Q92839 578 aa12.97□□□□□ -0.33
VCAN-212ENST00000515397 TNFRSF25Q93038 417 aa12.97□□□□□ -0.33
VCAN-212ENST00000515397 RIT2Q99578 217 aa12.97□□□□□ -0.33
VCAN-212ENST00000515397 TANC1Q9C0D5 1861 aa12.97□□□□□ -0.33
VCAN-212ENST00000515397 MARCH6O60337 910 aa12.96□□□□□ -0.33
VCAN-212ENST00000515397 CAND2O75155 1236 aa12.96□□□□□ -0.33
VCAN-212ENST00000515397 VTNP04004 478 aa12.96□□□□□ -0.33
VCAN-212ENST00000515397 SLC26A2P50443 739 aa12.96□□□□□ -0.33
VCAN-212ENST00000515397 CLCN3P51790 818 aa12.96□□□□□ -0.33
VCAN-212ENST00000515397 PRKCEQ02156 737 aa12.96□□□□□ -0.33
VCAN-212ENST00000515397 TRIM29Q14134 588 aa12.96□□□□□ -0.33
VCAN-212ENST00000515397 KIZQ2M2Z5 673 aa12.96□□□□□ -0.33
VCAN-212ENST00000515397 ZNF484Q5JVG2 852 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms